Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.44□□□□□ -1.7
CD40P25942 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.44□□□□□ -1.7
CD40P25942 AC006272.2-201ENST00000594725 163 ntBASIC4.44□□□□□ -1.7
CD40P25942 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.44□□□□□ -1.7
CD40P25942 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.44□□□□□ -1.7
CD40P25942 RNA5SP108-201ENST00000605921 117 ntBASIC4.44□□□□□ -1.7
CD40P25942 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CD40P25942 MIR6839-201ENST00000620425 113 ntBASIC4.44□□□□□ -1.7
CD40P25942 AL589994.2-201ENST00000621124 579 ntBASIC4.44□□□□□ -1.7
CD40P25942 AC091905.4-201ENST00000623432 202 ntBASIC4.44□□□□□ -1.7
CD40P25942 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.44□□□□□ -1.7
CD40P25942 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CD40P25942 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CD40P25942 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CD40P25942 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CD40P25942 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.44□□□□□ -1.7
CD40P25942 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CD40P25942 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC4.44□□□□□ -1.7
CD40P25942 THAP12P5-201ENST00000405864 2275 ntBASIC4.44□□□□□ -1.7
CD40P25942 AC022893.2-201ENST00000564832 3296 ntBASIC4.44□□□□□ -1.7
CD40P25942 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.44□□□□□ -1.7
CD40P25942 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.44□□□□□ -1.7
CD40P25942 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC4.44□□□□□ -1.7
CD40P25942 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
CD40P25942 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC4.44□□□□□ -1.7
CD40P25942 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CD40P25942 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
CD40P25942 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
CD40P25942 Z73965.1-201ENST00000623412 2297 ntBASIC4.43□□□□□ -1.7
CD40P25942 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CD40P25942 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CD40P25942 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CD40P25942 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CD40P25942 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CD40P25942 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CD40P25942 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CD40P25942 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CD40P25942 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CD40P25942 ALB-202ENST00000401494 1659 ntTSL 5 BASIC4.43□□□□□ -1.7
CD40P25942 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.43□□□□□ -1.7
CD40P25942 RNA5SP123-201ENST00000363244 119 ntBASIC4.43□□□□□ -1.7
CD40P25942 OR1L6-202ENST00000373684 1044 ntBASIC4.43□□□□□ -1.7
CD40P25942 SNORA32.2-201ENST00000384049 122 ntBASIC4.43□□□□□ -1.7
CD40P25942 RPL32P23-201ENST00000397237 405 ntBASIC4.43□□□□□ -1.7
CD40P25942 UBE2V1P2-201ENST00000397758 440 ntBASIC4.43□□□□□ -1.7
CD40P25942 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC4.43□□□□□ -1.7
CD40P25942 AL606923.1-201ENST00000406616 190 ntBASIC4.43□□□□□ -1.7
CD40P25942 RNU6-193P-201ENST00000410977 107 ntBASIC4.43□□□□□ -1.7
CD40P25942 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC4.43□□□□□ -1.7
CD40P25942 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC4.43□□□□□ -1.7
CD40P25942 VTI1BP4-201ENST00000427516 527 ntBASIC4.43□□□□□ -1.7
CD40P25942 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.43□□□□□ -1.7
CD40P25942 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.43□□□□□ -1.7
CD40P25942 RPL36AP6-201ENST00000435770 321 ntBASIC4.43□□□□□ -1.7
CD40P25942 AC090774.1-201ENST00000435925 246 ntBASIC4.43□□□□□ -1.7
CD40P25942 CYCSP43-201ENST00000438233 310 ntBASIC4.43□□□□□ -1.7
CD40P25942 AL772161.1-201ENST00000439130 476 ntBASIC4.43□□□□□ -1.7
CD40P25942 RPL23AP43-201ENST00000446445 471 ntBASIC4.43□□□□□ -1.7
CD40P25942 RPL7P12-201ENST00000446719 750 ntBASIC4.43□□□□□ -1.7
CD40P25942 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.43□□□□□ -1.7
CD40P25942 AL031584.1-201ENST00000447169 754 ntBASIC4.43□□□□□ -1.7
CD40P25942 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.43□□□□□ -1.7
CD40P25942 AL118520.1-201ENST00000450770 291 ntBASIC4.43□□□□□ -1.7
CD40P25942 AC108161.1-201ENST00000461060 402 ntBASIC4.43□□□□□ -1.7
CD40P25942 RN7SL443P-201ENST00000464331 290 ntBASIC4.43□□□□□ -1.7
CD40P25942 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC4.43□□□□□ -1.7
CD40P25942 AC111000.3-201ENST00000508057 576 ntBASIC4.43□□□□□ -1.7
CD40P25942 COX6B1P5-201ENST00000509843 249 ntBASIC4.43□□□□□ -1.7
CD40P25942 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.43□□□□□ -1.7
CD40P25942 NARSP2-201ENST00000518524 679 ntBASIC4.43□□□□□ -1.7
CD40P25942 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.43□□□□□ -1.7
CD40P25942 HMGB3P26-201ENST00000560051 582 ntBASIC4.43□□□□□ -1.7
CD40P25942 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.43□□□□□ -1.7
CD40P25942 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC4.43□□□□□ -1.7
CD40P25942 MIR4436B2-201ENST00000581415 91 ntBASIC4.43□□□□□ -1.7
CD40P25942 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
CD40P25942 MIR4436B1-201ENST00000583272 91 ntBASIC4.43□□□□□ -1.7
CD40P25942 MIR4691-201ENST00000583764 85 ntBASIC4.43□□□□□ -1.7
CD40P25942 AC011487.3-201ENST00000593607 453 ntBASIC4.43□□□□□ -1.7
CD40P25942 AL356055.1-201ENST00000602528 446 ntBASIC4.43□□□□□ -1.7
CD40P25942 AP001521.2-201ENST00000608772 546 ntBASIC4.43□□□□□ -1.7
CD40P25942 AL049539.1-201ENST00000611964 459 ntBASIC4.43□□□□□ -1.7
CD40P25942 AC004696.1-201ENST00000614345 607 ntBASIC4.43□□□□□ -1.7
CD40P25942 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.43□□□□□ -1.7
CD40P25942 AC005858.4-201ENST00000623191 700 ntBASIC4.43□□□□□ -1.7
CD40P25942 AC011155.2-201ENST00000623202 216 ntBASIC4.43□□□□□ -1.7
CD40P25942 AC110801.1-201ENST00000623590 212 ntBASIC4.43□□□□□ -1.7
CD40P25942 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.43□□□□□ -1.7
CD40P25942 AC112487.2-201ENST00000637950 304 ntBASIC4.43□□□□□ -1.7
CD40P25942 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CD40P25942 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.43□□□□□ -1.7
CD40P25942 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.43□□□□□ -1.7
CD40P25942 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
CD40P25942 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
CD40P25942 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.43□□□□□ -1.7
CD40P25942 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.43□□□□□ -1.7
CD40P25942 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.43□□□□□ -1.7
CD40P25942 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.43□□□□□ -1.7
CD40P25942 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
CD40P25942 INTS6P1-201ENST00000504674 2530 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms