Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 RNU4-1-201ENST00000363925 141 ntBASIC4.1□□□□□ -1.75
TNFSF4P23510 Y_RNA.582-201ENST00000391023 95 ntBASIC4.1□□□□□ -1.75
TNFSF4P23510 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TNFSF4P23510 MIR298-201ENST00000401212 88 ntBASIC4.1□□□□□ -1.75
TNFSF4P23510 HSPE1P26-201ENST00000405341 275 ntBASIC4.1□□□□□ -1.75
TNFSF4P23510 TXNP7-201ENST00000406296 293 ntBASIC4.1□□□□□ -1.75
TNFSF4P23510 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.1□□□□□ -1.75
TNFSF4P23510 RNA5SP113-201ENST00000410486 84 ntBASIC4.1□□□□□ -1.75
TNFSF4P23510 RNU2-66P-201ENST00000410650 161 ntBASIC4.1□□□□□ -1.75
TNFSF4P23510 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.1□□□□□ -1.75
TNFSF4P23510 TRIM60P10Y-201ENST00000425589 751 ntBASIC4.1□□□□□ -1.75
TNFSF4P23510 AL590762.4-201ENST00000425885 253 ntBASIC4.1□□□□□ -1.75
TNFSF4P23510 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.1□□□□□ -1.75
TNFSF4P23510 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.1□□□□□ -1.75
TNFSF4P23510 TRIM60P8Y-201ENST00000436338 762 ntBASIC4.1□□□□□ -1.75
TNFSF4P23510 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC4.1□□□□□ -1.75
TNFSF4P23510 AC016696.1-201ENST00000446949 318 ntBASIC4.1□□□□□ -1.75
TNFSF4P23510 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC4.1□□□□□ -1.75
TNFSF4P23510 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.1□□□□□ -1.75
TNFSF4P23510 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
TNFSF4P23510 AC012158.1-204ENST00000483430 465 ntBASIC4.1□□□□□ -1.75
TNFSF4P23510 RPS23P1-201ENST00000491662 432 ntBASIC4.1□□□□□ -1.75
TNFSF4P23510 AC104164.2-201ENST00000496953 495 ntBASIC4.1□□□□□ -1.75
TNFSF4P23510 AC068305.1-201ENST00000497406 726 ntBASIC4.1□□□□□ -1.75
TNFSF4P23510 AC138853.1-201ENST00000503549 823 ntBASIC4.1□□□□□ -1.75
TNFSF4P23510 RNA5SP337-201ENST00000517007 109 ntBASIC4.1□□□□□ -1.75
TNFSF4P23510 RNU6-840P-201ENST00000517275 65 ntBASIC4.1□□□□□ -1.75
TNFSF4P23510 AC134698.5-201ENST00000519444 336 ntBASIC4.1□□□□□ -1.75
TNFSF4P23510 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.1□□□□□ -1.75
TNFSF4P23510 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TNFSF4P23510 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.1□□□□□ -1.75
TNFSF4P23510 MIR3921-201ENST00000577308 85 ntBASIC4.1□□□□□ -1.75
TNFSF4P23510 AC091042.1-201ENST00000579213 173 ntBASIC4.1□□□□□ -1.75
TNFSF4P23510 AC105224.1-201ENST00000587055 421 ntBASIC4.1□□□□□ -1.75
TNFSF4P23510 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.1□□□□□ -1.75
TNFSF4P23510 AF038458.1-201ENST00000588406 262 ntBASIC4.1□□□□□ -1.75
TNFSF4P23510 AL606834.2-201ENST00000602954 668 ntBASIC4.1□□□□□ -1.75
TNFSF4P23510 AC098614.4-201ENST00000607601 462 ntBASIC4.1□□□□□ -1.75
TNFSF4P23510 AP002826.1-201ENST00000608835 315 ntBASIC4.1□□□□□ -1.75
TNFSF4P23510 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.1□□□□□ -1.75
TNFSF4P23510 AC006338.1-201ENST00000618453 749 ntBASIC4.1□□□□□ -1.75
TNFSF4P23510 AC087385.3-201ENST00000620477 187 ntBASIC4.1□□□□□ -1.75
TNFSF4P23510 AC048347.1-201ENST00000624621 427 ntBASIC4.1□□□□□ -1.75
TNFSF4P23510 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.1□□□□□ -1.75
TNFSF4P23510 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.1□□□□□ -1.75
TNFSF4P23510 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.1□□□□□ -1.75
TNFSF4P23510 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.1□□□□□ -1.75
TNFSF4P23510 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TNFSF4P23510 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TNFSF4P23510 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
TNFSF4P23510 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
TNFSF4P23510 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TNFSF4P23510 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TNFSF4P23510 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.1□□□□□ -1.75
TNFSF4P23510 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TNFSF4P23510 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
TNFSF4P23510 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
TNFSF4P23510 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.09□□□□□ -1.75
TNFSF4P23510 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
TNFSF4P23510 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
TNFSF4P23510 AC018529.3-201ENST00000624212 2254 ntBASIC4.09□□□□□ -1.75
TNFSF4P23510 AL133383.2-201ENST00000622958 2336 ntBASIC4.09□□□□□ -1.75
TNFSF4P23510 RNU5A-1-201ENST00000362698 116 ntBASIC4.09□□□□□ -1.75
TNFSF4P23510 RNY1P12-201ENST00000364251 105 ntBASIC4.09□□□□□ -1.75
TNFSF4P23510 AC110754.1-201ENST00000399740 601 ntBASIC4.09□□□□□ -1.75
TNFSF4P23510 Z98745.1-201ENST00000402553 494 ntBASIC4.09□□□□□ -1.75
TNFSF4P23510 MIR1290-201ENST00000408735 78 ntBASIC4.09□□□□□ -1.75
TNFSF4P23510 RNA5SP129-201ENST00000410276 118 ntBASIC4.09□□□□□ -1.75
TNFSF4P23510 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC4.09□□□□□ -1.75
TNFSF4P23510 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC4.09□□□□□ -1.75
TNFSF4P23510 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.09□□□□□ -1.75
TNFSF4P23510 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC4.09□□□□□ -1.75
TNFSF4P23510 PIGFP2-201ENST00000421400 651 ntBASIC4.09□□□□□ -1.75
TNFSF4P23510 RPL36AP10-201ENST00000421785 322 ntBASIC4.09□□□□□ -1.75
TNFSF4P23510 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
TNFSF4P23510 RPL27AP8-201ENST00000424277 446 ntBASIC4.09□□□□□ -1.75
TNFSF4P23510 AC010975.2-201ENST00000427781 588 ntBASIC4.09□□□□□ -1.75
TNFSF4P23510 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.09□□□□□ -1.75
TNFSF4P23510 USP12PX-201ENST00000432383 1057 ntBASIC4.09□□□□□ -1.75
TNFSF4P23510 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC4.09□□□□□ -1.75
TNFSF4P23510 NRBF2P3-201ENST00000432731 865 ntBASIC4.09□□□□□ -1.75
TNFSF4P23510 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC4.09□□□□□ -1.75
TNFSF4P23510 MTND1P34-201ENST00000438556 671 ntBASIC4.09□□□□□ -1.75
TNFSF4P23510 HMGB1P12-201ENST00000438594 598 ntBASIC4.09□□□□□ -1.75
TNFSF4P23510 NANOGP10-201ENST00000453325 895 ntBASIC4.09□□□□□ -1.75
TNFSF4P23510 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
TNFSF4P23510 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.09□□□□□ -1.75
TNFSF4P23510 HSPE1P6-201ENST00000479457 291 ntBASIC4.09□□□□□ -1.75
TNFSF4P23510 RPS4XP13-201ENST00000483219 789 ntBASIC4.09□□□□□ -1.75
TNFSF4P23510 KCTD9P5-201ENST00000504141 1170 ntBASIC4.09□□□□□ -1.75
TNFSF4P23510 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.09□□□□□ -1.75
TNFSF4P23510 AC105914.1-201ENST00000511798 226 ntBASIC4.09□□□□□ -1.75
TNFSF4P23510 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC4.09□□□□□ -1.75
TNFSF4P23510 IGKV1-32-201ENST00000519290 311 ntBASIC4.09□□□□□ -1.75
TNFSF4P23510 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.09□□□□□ -1.75
TNFSF4P23510 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC4.09□□□□□ -1.75
TNFSF4P23510 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
TNFSF4P23510 AC123904.3-201ENST00000547218 814 ntBASIC4.09□□□□□ -1.75
TNFSF4P23510 NTS-203ENST00000551529 801 ntTSL 3 BASIC4.09□□□□□ -1.75
TNFSF4P23510 OR4H12P-201ENST00000556269 907 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms