Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.78□□□□□ -1.96
USF1P22415 AL158053.1-201ENST00000441503 453 ntBASIC2.78□□□□□ -1.96
USF1P22415 AC008264.1-201ENST00000447612 367 ntBASIC2.78□□□□□ -1.96
USF1P22415 AC125238.1-201ENST00000448842 249 ntBASIC2.78□□□□□ -1.96
USF1P22415 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC2.78□□□□□ -1.96
USF1P22415 MTCO3P2-201ENST00000457365 171 ntBASIC2.78□□□□□ -1.96
USF1P22415 RPS4XP2-201ENST00000458402 793 ntBASIC2.78□□□□□ -1.96
USF1P22415 S100A11P2-201ENST00000467589 312 ntBASIC2.78□□□□□ -1.96
USF1P22415 AC109925.1-201ENST00000478069 331 ntBASIC2.78□□□□□ -1.96
USF1P22415 AC021205.2-201ENST00000480069 347 ntBASIC2.78□□□□□ -1.96
USF1P22415 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
USF1P22415 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.78□□□□□ -1.96
USF1P22415 MTCYBP37-201ENST00000510642 1133 ntBASIC2.78□□□□□ -1.96
USF1P22415 RNA5SP341-201ENST00000516261 117 ntBASIC2.78□□□□□ -1.96
USF1P22415 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.78□□□□□ -1.96
USF1P22415 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
USF1P22415 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.78□□□□□ -1.96
USF1P22415 HIGD1AP1-201ENST00000550979 275 ntBASIC2.78□□□□□ -1.96
USF1P22415 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.78□□□□□ -1.96
USF1P22415 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC2.78□□□□□ -1.96
USF1P22415 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC2.78□□□□□ -1.96
USF1P22415 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC2.78□□□□□ -1.96
USF1P22415 GAS5-AS1-201ENST00000602767 694 ntBASIC2.78□□□□□ -1.96
USF1P22415 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC2.78□□□□□ -1.96
USF1P22415 AC098483.2-201ENST00000603158 454 ntBASIC2.78□□□□□ -1.96
USF1P22415 AC002487.1-201ENST00000604565 994 ntBASIC2.78□□□□□ -1.96
USF1P22415 AC006329.2-201ENST00000611491 394 ntBASIC2.78□□□□□ -1.96
USF1P22415 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.78□□□□□ -1.96
USF1P22415 AC018755.4-201ENST00000619715 454 ntBASIC2.78□□□□□ -1.96
USF1P22415 AL356321.1-201ENST00000621360 228 ntBASIC2.78□□□□□ -1.96
USF1P22415 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.78□□□□□ -1.96
USF1P22415 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
USF1P22415 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
USF1P22415 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.96
USF1P22415 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.77□□□□□ -1.97
USF1P22415 AL512283.1-201ENST00000606756 1384 ntBASIC2.77□□□□□ -1.97
USF1P22415 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
USF1P22415 AL645568.2-201ENST00000432815 1337 ntBASIC2.77□□□□□ -1.97
USF1P22415 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC2.77□□□□□ -1.97
USF1P22415 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.77□□□□□ -1.97
USF1P22415 RPL7P26-201ENST00000333817 754 ntBASIC2.77□□□□□ -1.97
USF1P22415 MIR422A-201ENST00000362286 90 ntBASIC2.77□□□□□ -1.97
USF1P22415 RNA5SP197-201ENST00000363357 119 ntBASIC2.77□□□□□ -1.97
USF1P22415 U6.112-201ENST00000384129 70 ntBASIC2.77□□□□□ -1.97
USF1P22415 SKINT1L-201ENST00000401057 817 ntBASIC2.77□□□□□ -1.97
USF1P22415 AL138885.1-201ENST00000405921 675 ntBASIC2.77□□□□□ -1.97
USF1P22415 AL354719.1-201ENST00000406535 843 ntBASIC2.77□□□□□ -1.97
USF1P22415 AL139098.1-201ENST00000407291 389 ntBASIC2.77□□□□□ -1.97
USF1P22415 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.77□□□□□ -1.97
USF1P22415 AC126124.2-201ENST00000413542 321 ntBASIC2.77□□□□□ -1.97
USF1P22415 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC2.77□□□□□ -1.97
USF1P22415 COTL1P1-201ENST00000422309 375 ntBASIC2.77□□□□□ -1.97
USF1P22415 GLRXP1-201ENST00000423261 334 ntBASIC2.77□□□□□ -1.97
USF1P22415 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.77□□□□□ -1.97
USF1P22415 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
USF1P22415 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC2.77□□□□□ -1.97
USF1P22415 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.77□□□□□ -1.97
USF1P22415 RPS20P24-201ENST00000457473 361 ntBASIC2.77□□□□□ -1.97
USF1P22415 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
USF1P22415 PABPC1P3-201ENST00000469174 459 ntBASIC2.77□□□□□ -1.97
USF1P22415 AC010301.1-201ENST00000473936 355 ntBASIC2.77□□□□□ -1.97
USF1P22415 AC006483.1-201ENST00000487308 313 ntBASIC2.77□□□□□ -1.97
USF1P22415 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC2.77□□□□□ -1.97
USF1P22415 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC2.77□□□□□ -1.97
USF1P22415 RNA5SP135-201ENST00000517019 125 ntBASIC2.77□□□□□ -1.97
USF1P22415 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC2.77□□□□□ -1.97
USF1P22415 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC2.77□□□□□ -1.97
USF1P22415 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC2.77□□□□□ -1.97
USF1P22415 AC087272.1-201ENST00000523624 533 ntBASIC2.77□□□□□ -1.97
USF1P22415 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
USF1P22415 AC006518.1-201ENST00000541449 943 ntBASIC2.77□□□□□ -1.97
USF1P22415 AC015917.1-201ENST00000579654 510 ntBASIC2.77□□□□□ -1.97
USF1P22415 LARP7P3-201ENST00000579888 337 ntBASIC2.77□□□□□ -1.97
USF1P22415 AL451007.1-201ENST00000595491 289 ntBASIC2.77□□□□□ -1.97
USF1P22415 AL109653.1-201ENST00000603091 248 ntBASIC2.77□□□□□ -1.97
USF1P22415 AL590240.3-201ENST00000621416 943 ntBASIC2.77□□□□□ -1.97
USF1P22415 AC005858.4-201ENST00000623191 700 ntBASIC2.77□□□□□ -1.97
USF1P22415 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.77□□□□□ -1.97
USF1P22415 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
USF1P22415 AF117829.1-206ENST00000621883 3802 ntBASIC2.77□□□□□ -1.97
USF1P22415 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
USF1P22415 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC2.76□□□□□ -1.97
USF1P22415 AC111188.2-201ENST00000529697 1387 ntBASIC2.76□□□□□ -1.97
USF1P22415 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
USF1P22415 DBF4P1-201ENST00000412976 1892 ntBASIC2.76□□□□□ -1.97
USF1P22415 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
USF1P22415 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
USF1P22415 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
USF1P22415 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
USF1P22415 DYNLT3P1-201ENST00000378574 347 ntBASIC2.76□□□□□ -1.97
USF1P22415 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.76□□□□□ -1.97
USF1P22415 SNORD116-23-201ENST00000384645 92 ntBASIC2.76□□□□□ -1.97
USF1P22415 Z99755.1-201ENST00000414048 380 ntBASIC2.76□□□□□ -1.97
USF1P22415 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.76□□□□□ -1.97
USF1P22415 TAF13P2-201ENST00000416876 286 ntBASIC2.76□□□□□ -1.97
USF1P22415 AC245291.1-201ENST00000419501 328 ntBASIC2.76□□□□□ -1.97
USF1P22415 SFR1P2-201ENST00000421841 730 ntBASIC2.76□□□□□ -1.97
USF1P22415 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC2.76□□□□□ -1.97
USF1P22415 RPL31P54-201ENST00000429803 370 ntBASIC2.76□□□□□ -1.97
USF1P22415 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms