Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 RNU1-68P-201ENST00000615382 146 ntBASIC3.28□□□□□ -1.88
XRCC1P18887 AL356321.1-201ENST00000621360 228 ntBASIC3.28□□□□□ -1.88
XRCC1P18887 U1.39-201ENST00000621562 146 ntBASIC3.28□□□□□ -1.88
XRCC1P18887 CR381572.1-201ENST00000625098 102 ntBASIC3.28□□□□□ -1.88
XRCC1P18887 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.28□□□□□ -1.88
XRCC1P18887 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
XRCC1P18887 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
XRCC1P18887 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.28□□□□□ -1.88
XRCC1P18887 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.28□□□□□ -1.88
XRCC1P18887 AC118273.1-201ENST00000525324 3006 ntBASIC3.27□□□□□ -1.89
XRCC1P18887 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
XRCC1P18887 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.27□□□□□ -1.89
XRCC1P18887 RNU4-51P-201ENST00000364206 140 ntBASIC3.27□□□□□ -1.89
XRCC1P18887 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
XRCC1P18887 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
XRCC1P18887 RNU6-761P-201ENST00000384148 107 ntBASIC3.27□□□□□ -1.89
XRCC1P18887 SNORA9-201ENST00000384215 133 ntBASIC3.27□□□□□ -1.89
XRCC1P18887 MIR620-201ENST00000385232 95 ntBASIC3.27□□□□□ -1.89
XRCC1P18887 MIR607-201ENST00000385241 96 ntBASIC3.27□□□□□ -1.89
XRCC1P18887 AP000567.1-201ENST00000406413 156 ntBASIC3.27□□□□□ -1.89
XRCC1P18887 Z99755.1-201ENST00000414048 380 ntBASIC3.27□□□□□ -1.89
XRCC1P18887 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.27□□□□□ -1.89
XRCC1P18887 C1DP1-201ENST00000426049 402 ntBASIC3.27□□□□□ -1.89
XRCC1P18887 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.27□□□□□ -1.89
XRCC1P18887 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.27□□□□□ -1.89
XRCC1P18887 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3.27□□□□□ -1.89
XRCC1P18887 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.27□□□□□ -1.89
XRCC1P18887 ELOCP13-201ENST00000443934 329 ntBASIC3.27□□□□□ -1.89
XRCC1P18887 MTND2P39-201ENST00000457230 764 ntBASIC3.27□□□□□ -1.89
XRCC1P18887 BTF3P5-201ENST00000457252 467 ntBASIC3.27□□□□□ -1.89
XRCC1P18887 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.27□□□□□ -1.89
XRCC1P18887 RPL5P24-201ENST00000463742 885 ntBASIC3.27□□□□□ -1.89
XRCC1P18887 NCOR1P1-202ENST00000486162 291 ntBASIC3.27□□□□□ -1.89
XRCC1P18887 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.27□□□□□ -1.89
XRCC1P18887 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.27□□□□□ -1.89
XRCC1P18887 AC010265.1-201ENST00000513509 211 ntBASIC3.27□□□□□ -1.89
XRCC1P18887 APOOP4-201ENST00000513530 597 ntBASIC3.27□□□□□ -1.89
XRCC1P18887 RNU6-276P-201ENST00000516114 96 ntBASIC3.27□□□□□ -1.89
XRCC1P18887 SNORA48.10-201ENST00000516965 160 ntBASIC3.27□□□□□ -1.89
XRCC1P18887 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.27□□□□□ -1.89
XRCC1P18887 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC3.27□□□□□ -1.89
XRCC1P18887 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.27□□□□□ -1.89
XRCC1P18887 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC3.27□□□□□ -1.89
XRCC1P18887 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.27□□□□□ -1.89
XRCC1P18887 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.27□□□□□ -1.89
XRCC1P18887 CKS1BP3-201ENST00000600888 237 ntBASIC3.27□□□□□ -1.89
XRCC1P18887 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.27□□□□□ -1.89
XRCC1P18887 AL161756.2-201ENST00000604597 246 ntBASIC3.27□□□□□ -1.89
XRCC1P18887 AL365400.2-201ENST00000605604 902 ntBASIC3.27□□□□□ -1.89
XRCC1P18887 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.27□□□□□ -1.89
XRCC1P18887 AC090425.2-201ENST00000608818 501 ntBASIC3.27□□□□□ -1.89
XRCC1P18887 AL442067.2-201ENST00000614033 363 ntBASIC3.27□□□□□ -1.89
XRCC1P18887 AC073968.1-201ENST00000618594 637 ntBASIC3.27□□□□□ -1.89
XRCC1P18887 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.27□□□□□ -1.89
XRCC1P18887 AC104985.3-201ENST00000623479 597 ntBASIC3.27□□□□□ -1.89
XRCC1P18887 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.27□□□□□ -1.89
XRCC1P18887 ZNF663P-202ENST00000641770 1131 ntBASIC3.27□□□□□ -1.89
XRCC1P18887 CR383658.2-201ENST00000547576 1525 ntBASIC3.27□□□□□ -1.89
XRCC1P18887 AC116096.1-201ENST00000566804 2314 ntBASIC3.27□□□□□ -1.89
XRCC1P18887 Z99496.1-201ENST00000469424 1477 ntBASIC3.27□□□□□ -1.89
XRCC1P18887 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
XRCC1P18887 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
XRCC1P18887 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
XRCC1P18887 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.26□□□□□ -1.89
XRCC1P18887 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
XRCC1P18887 AC017071.1-201ENST00000564407 2204 ntBASIC3.26□□□□□ -1.89
XRCC1P18887 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
XRCC1P18887 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
XRCC1P18887 RNU5E-10P-201ENST00000363506 118 ntBASIC3.26□□□□□ -1.89
XRCC1P18887 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.26□□□□□ -1.89
XRCC1P18887 SNORA51.6-201ENST00000384151 125 ntBASIC3.26□□□□□ -1.89
XRCC1P18887 Y_RNA.493-201ENST00000384422 102 ntBASIC3.26□□□□□ -1.89
XRCC1P18887 AL024474.1-201ENST00000404655 591 ntBASIC3.26□□□□□ -1.89
XRCC1P18887 AL583834.1-201ENST00000406943 343 ntBASIC3.26□□□□□ -1.89
XRCC1P18887 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.26□□□□□ -1.89
XRCC1P18887 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.26□□□□□ -1.89
XRCC1P18887 AC006960.1-201ENST00000419980 153 ntBASIC3.26□□□□□ -1.89
XRCC1P18887 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.26□□□□□ -1.89
XRCC1P18887 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.26□□□□□ -1.89
XRCC1P18887 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC3.26□□□□□ -1.89
XRCC1P18887 GTF2IP3-201ENST00000433887 494 ntBASIC3.26□□□□□ -1.89
XRCC1P18887 SEPT7P5-201ENST00000434048 306 ntBASIC3.26□□□□□ -1.89
XRCC1P18887 GTF2IP7-202ENST00000436677 309 ntBASIC3.26□□□□□ -1.89
XRCC1P18887 AL591503.2-201ENST00000442314 1005 ntBASIC3.26□□□□□ -1.89
XRCC1P18887 AC008264.1-201ENST00000447612 367 ntBASIC3.26□□□□□ -1.89
XRCC1P18887 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.26□□□□□ -1.89
XRCC1P18887 COX6CP18-201ENST00000448769 222 ntBASIC3.26□□□□□ -1.89
XRCC1P18887 PTGES3P5-201ENST00000455109 434 ntBASIC3.26□□□□□ -1.89
XRCC1P18887 FCF1P6-201ENST00000456841 595 ntBASIC3.26□□□□□ -1.89
XRCC1P18887 BX510359.1-201ENST00000456973 237 ntBASIC3.26□□□□□ -1.89
XRCC1P18887 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.26□□□□□ -1.89
XRCC1P18887 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.26□□□□□ -1.89
XRCC1P18887 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.26□□□□□ -1.89
XRCC1P18887 AC110794.1-201ENST00000505816 425 ntBASIC3.26□□□□□ -1.89
XRCC1P18887 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
XRCC1P18887 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC3.26□□□□□ -1.89
XRCC1P18887 MTATP6P9-201ENST00000515039 680 ntBASIC3.26□□□□□ -1.89
XRCC1P18887 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.26□□□□□ -1.89
XRCC1P18887 AP001189.2-201ENST00000527320 189 ntBASIC3.26□□□□□ -1.89
XRCC1P18887 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 131.8 ms