Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 ATG3P1-201ENST00000419507 911 ntBASIC2.68□□□□□ -1.98
FAM228BP0C875 RPL21P66-201ENST00000426566 466 ntBASIC2.68□□□□□ -1.98
FAM228BP0C875 LAMTOR3P1-201ENST00000428620 370 ntBASIC2.68□□□□□ -1.98
FAM228BP0C875 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.68□□□□□ -1.98
FAM228BP0C875 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.68□□□□□ -1.98
FAM228BP0C875 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.68□□□□□ -1.98
FAM228BP0C875 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.68□□□□□ -1.98
FAM228BP0C875 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.68□□□□□ -1.98
FAM228BP0C875 RPL21P131-201ENST00000497298 483 ntBASIC2.68□□□□□ -1.98
FAM228BP0C875 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.68□□□□□ -1.98
FAM228BP0C875 SNORA26.10-201ENST00000516427 141 ntBASIC2.68□□□□□ -1.98
FAM228BP0C875 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC2.68□□□□□ -1.98
FAM228BP0C875 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC2.68□□□□□ -1.98
FAM228BP0C875 COX6B1P6-201ENST00000522347 255 ntBASIC2.68□□□□□ -1.98
FAM228BP0C875 AC004923.2-201ENST00000529649 369 ntBASIC2.68□□□□□ -1.98
FAM228BP0C875 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.68□□□□□ -1.98
FAM228BP0C875 DUXAP4-201ENST00000603046 613 ntBASIC2.68□□□□□ -1.98
FAM228BP0C875 ATP1B3P1-201ENST00000605365 821 ntBASIC2.68□□□□□ -1.98
FAM228BP0C875 AC110792.4-201ENST00000609843 298 ntBASIC2.68□□□□□ -1.98
FAM228BP0C875 SNHG22-203ENST00000617833 660 ntBASIC2.68□□□□□ -1.98
FAM228BP0C875 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.68□□□□□ -1.98
FAM228BP0C875 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.68□□□□□ -1.98
FAM228BP0C875 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC2.68□□□□□ -1.98
FAM228BP0C875 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
FAM228BP0C875 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
FAM228BP0C875 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
FAM228BP0C875 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
FAM228BP0C875 ZNF833P-201ENST00000424938 1494 ntBASIC2.67□□□□□ -1.98
FAM228BP0C875 ZNF37BP-203ENST00000452306 1352 ntBASIC2.67□□□□□ -1.98
FAM228BP0C875 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.67□□□□□ -1.98
FAM228BP0C875 FRG1BP-201ENST00000278882 761 ntBASIC2.67□□□□□ -1.98
FAM228BP0C875 RNU6-629P-201ENST00000384061 103 ntBASIC2.67□□□□□ -1.98
FAM228BP0C875 RNU2-52P-201ENST00000410680 190 ntBASIC2.67□□□□□ -1.98
FAM228BP0C875 RNU4-74P-201ENST00000411280 161 ntBASIC2.67□□□□□ -1.98
FAM228BP0C875 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.67□□□□□ -1.98
FAM228BP0C875 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC2.67□□□□□ -1.98
FAM228BP0C875 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.67□□□□□ -1.98
FAM228BP0C875 AC107083.1-201ENST00000439643 279 ntBASIC2.67□□□□□ -1.98
FAM228BP0C875 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.67□□□□□ -1.98
FAM228BP0C875 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.67□□□□□ -1.98
FAM228BP0C875 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC2.67□□□□□ -1.98
FAM228BP0C875 AC009961.3-201ENST00000449832 765 ntBASIC2.67□□□□□ -1.98
FAM228BP0C875 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.67□□□□□ -1.98
FAM228BP0C875 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC2.67□□□□□ -1.98
FAM228BP0C875 AC096725.1-201ENST00000514266 313 ntBASIC2.67□□□□□ -1.98
FAM228BP0C875 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC2.67□□□□□ -1.98
FAM228BP0C875 OR5BN1P-201ENST00000532955 829 ntBASIC2.67□□□□□ -1.98
FAM228BP0C875 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
FAM228BP0C875 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC2.67□□□□□ -1.98
FAM228BP0C875 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.67□□□□□ -1.98
FAM228BP0C875 VN1R90P-201ENST00000595717 726 ntBASIC2.67□□□□□ -1.98
FAM228BP0C875 AC073387.2-201ENST00000604797 784 ntBASIC2.67□□□□□ -1.98
FAM228BP0C875 AL033523.1-201ENST00000605153 153 ntBASIC2.67□□□□□ -1.98
FAM228BP0C875 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
FAM228BP0C875 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.67□□□□□ -1.98
FAM228BP0C875 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
FAM228BP0C875 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
FAM228BP0C875 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
FAM228BP0C875 RNA5SP456-201ENST00000364002 114 ntBASIC2.66□□□□□ -1.98
FAM228BP0C875 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC2.66□□□□□ -1.98
FAM228BP0C875 DEFB109C-201ENST00000382575 264 ntBASIC2.66□□□□□ -1.98
FAM228BP0C875 DEFB109B-201ENST00000382656 264 ntBASIC2.66□□□□□ -1.98
FAM228BP0C875 RNU6-152P-201ENST00000384037 107 ntBASIC2.66□□□□□ -1.98
FAM228BP0C875 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC2.66□□□□□ -1.98
FAM228BP0C875 MTCYBP24-201ENST00000420387 1106 ntBASIC2.66□□□□□ -1.98
FAM228BP0C875 MTCO2P17-201ENST00000424336 677 ntBASIC2.66□□□□□ -1.98
FAM228BP0C875 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.66□□□□□ -1.98
FAM228BP0C875 AC000041.1-201ENST00000439655 175 ntBASIC2.66□□□□□ -1.98
FAM228BP0C875 AP000936.2-201ENST00000447151 681 ntBASIC2.66□□□□□ -1.98
FAM228BP0C875 AP002345.1-201ENST00000456493 928 ntBASIC2.66□□□□□ -1.98
FAM228BP0C875 SNORD109B-201ENST00000458961 67 ntBASIC2.66□□□□□ -1.98
FAM228BP0C875 SNORD109A-201ENST00000459128 67 ntBASIC2.66□□□□□ -1.98
FAM228BP0C875 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.66□□□□□ -1.98
FAM228BP0C875 SUMO1P1-201ENST00000497904 306 ntBASIC2.66□□□□□ -1.98
FAM228BP0C875 HMGB1P22-201ENST00000505315 124 ntBASIC2.66□□□□□ -1.98
FAM228BP0C875 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.66□□□□□ -1.98
FAM228BP0C875 LY96-202ENST00000518893 430 ntTSL 3 BASIC2.66□□□□□ -1.98
FAM228BP0C875 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.66□□□□□ -1.98
FAM228BP0C875 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC2.66□□□□□ -1.98
FAM228BP0C875 COX6CP8-201ENST00000522620 226 ntBASIC2.66□□□□□ -1.98
FAM228BP0C875 AP004371.1-201ENST00000525240 214 ntBASIC2.66□□□□□ -1.98
FAM228BP0C875 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.66□□□□□ -1.98
FAM228BP0C875 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC2.66□□□□□ -1.98
FAM228BP0C875 TPMTP1-201ENST00000592307 737 ntBASIC2.66□□□□□ -1.98
FAM228BP0C875 AC007619.2-201ENST00000605743 379 ntBASIC2.66□□□□□ -1.98
FAM228BP0C875 CYP3A51P-201ENST00000633513 256 ntBASIC2.66□□□□□ -1.98
FAM228BP0C875 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
FAM228BP0C875 AP002907.1-201ENST00000606361 1430 ntBASIC2.66□□□□□ -1.98
FAM228BP0C875 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC2.65□□□□□ -1.98
FAM228BP0C875 PABPC1P7-201ENST00000413177 1513 ntBASIC2.65□□□□□ -1.99
FAM228BP0C875 OR5J1P-201ENST00000313544 939 ntBASIC2.65□□□□□ -1.99
FAM228BP0C875 RNU6-859P-201ENST00000362728 107 ntBASIC2.65□□□□□ -1.99
FAM228BP0C875 SNORA11-201ENST00000408789 128 ntBASIC2.65□□□□□ -1.99
FAM228BP0C875 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.65□□□□□ -1.99
FAM228BP0C875 AC233728.2-201ENST00000425348 757 ntBASIC2.65□□□□□ -1.99
FAM228BP0C875 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.65□□□□□ -1.99
FAM228BP0C875 RPL7P29-201ENST00000437151 728 ntBASIC2.65□□□□□ -1.99
FAM228BP0C875 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.65□□□□□ -1.99
FAM228BP0C875 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
FAM228BP0C875 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms