Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
VIMP08670 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
VIMP08670 AL136164.4-201ENST00000625013 2135 ntBASIC3.58□□□□□ -1.84
VIMP08670 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
VIMP08670 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
VIMP08670 SNORD3H-201ENST00000384486 214 ntBASIC3.58□□□□□ -1.84
VIMP08670 MIR1284-201ENST00000408337 120 ntBASIC3.58□□□□□ -1.84
VIMP08670 RNU2-47P-201ENST00000410649 186 ntBASIC3.58□□□□□ -1.84
VIMP08670 AC093578.1-201ENST00000415219 368 ntBASIC3.58□□□□□ -1.84
VIMP08670 RPL7P30-201ENST00000420888 709 ntBASIC3.58□□□□□ -1.84
VIMP08670 AL139421.1-201ENST00000423010 169 ntBASIC3.58□□□□□ -1.84
VIMP08670 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC3.58□□□□□ -1.84
VIMP08670 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.58□□□□□ -1.84
VIMP08670 AP000907.1-201ENST00000428428 510 ntBASIC3.58□□□□□ -1.84
VIMP08670 RPS25P9-201ENST00000435591 252 ntBASIC3.58□□□□□ -1.84
VIMP08670 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC3.58□□□□□ -1.84
VIMP08670 TRIM60P18-201ENST00000441518 828 ntBASIC3.58□□□□□ -1.84
VIMP08670 AL357552.1-201ENST00000445254 415 ntBASIC3.58□□□□□ -1.84
VIMP08670 RPL7P52-201ENST00000449200 742 ntBASIC3.58□□□□□ -1.84
VIMP08670 AC010655.1-201ENST00000449336 292 ntBASIC3.58□□□□□ -1.84
VIMP08670 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.58□□□□□ -1.84
VIMP08670 Z82190.1-201ENST00000454534 490 ntBASIC3.58□□□□□ -1.84
VIMP08670 NECAP1P2-201ENST00000455668 727 ntBASIC3.58□□□□□ -1.84
VIMP08670 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.58□□□□□ -1.84
VIMP08670 ST13P14-201ENST00000474095 734 ntBASIC3.58□□□□□ -1.84
VIMP08670 AP000563.1-201ENST00000490865 758 ntBASIC3.58□□□□□ -1.84
VIMP08670 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.58□□□□□ -1.84
VIMP08670 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.58□□□□□ -1.84
VIMP08670 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.58□□□□□ -1.84
VIMP08670 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.58□□□□□ -1.84
VIMP08670 AC091951.3-201ENST00000504093 246 ntBASIC3.58□□□□□ -1.84
VIMP08670 AC020699.1-201ENST00000505161 445 ntBASIC3.58□□□□□ -1.84
VIMP08670 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC3.58□□□□□ -1.84
VIMP08670 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC3.58□□□□□ -1.84
VIMP08670 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.58□□□□□ -1.84
VIMP08670 RAB9BP1-201ENST00000519581 626 ntBASIC3.58□□□□□ -1.84
VIMP08670 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.58□□□□□ -1.84
VIMP08670 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.58□□□□□ -1.84
VIMP08670 MTCO1P49-201ENST00000523429 802 ntBASIC3.58□□□□□ -1.84
VIMP08670 OR5AK1P-201ENST00000524837 922 ntBASIC3.58□□□□□ -1.84
VIMP08670 AP001372.4-201ENST00000524889 472 ntBASIC3.58□□□□□ -1.84
VIMP08670 DEFB131D-201ENST00000526803 184 ntBASIC3.58□□□□□ -1.84
VIMP08670 AP000926.4-201ENST00000527351 454 ntBASIC3.58□□□□□ -1.84
VIMP08670 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
VIMP08670 AC026333.2-201ENST00000542164 106 ntBASIC3.58□□□□□ -1.84
VIMP08670 SETP7-201ENST00000552169 453 ntBASIC3.58□□□□□ -1.84
VIMP08670 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.58□□□□□ -1.84
VIMP08670 DUXAP6-201ENST00000553858 601 ntBASIC3.58□□□□□ -1.84
VIMP08670 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.58□□□□□ -1.84
VIMP08670 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.58□□□□□ -1.84
VIMP08670 AC009712.1-201ENST00000564938 316 ntBASIC3.58□□□□□ -1.84
VIMP08670 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.58□□□□□ -1.84
VIMP08670 MIR4474-201ENST00000579189 78 ntBASIC3.58□□□□□ -1.84
VIMP08670 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.58□□□□□ -1.84
VIMP08670 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC3.58□□□□□ -1.84
VIMP08670 ARF4P1-201ENST00000605447 541 ntBASIC3.58□□□□□ -1.84
VIMP08670 AC006270.3-201ENST00000605967 1036 ntBASIC3.58□□□□□ -1.84
VIMP08670 AC007349.4-201ENST00000608114 532 ntBASIC3.58□□□□□ -1.84
VIMP08670 AC015967.1-201ENST00000619893 476 ntBASIC3.58□□□□□ -1.84
VIMP08670 AL353748.2-201ENST00000622148 471 ntBASIC3.58□□□□□ -1.84
VIMP08670 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC3.58□□□□□ -1.84
VIMP08670 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
VIMP08670 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.58□□□□□ -1.84
VIMP08670 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
VIMP08670 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
VIMP08670 MTND4P34-201ENST00000572715 1371 ntBASIC3.58□□□□□ -1.84
VIMP08670 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
VIMP08670 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
VIMP08670 AP000776.1-201ENST00000530032 1663 ntBASIC3.58□□□□□ -1.84
VIMP08670 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.58□□□□□ -1.84
VIMP08670 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.58□□□□□ -1.84
VIMP08670 AC116096.1-201ENST00000566804 2314 ntBASIC3.58□□□□□ -1.84
VIMP08670 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
VIMP08670 MIR513B-201ENST00000385136 84 ntBASIC3.57□□□□□ -1.84
VIMP08670 SOD2P1-201ENST00000396543 562 ntBASIC3.57□□□□□ -1.84
VIMP08670 AL031679.1-201ENST00000400616 525 ntBASIC3.57□□□□□ -1.84
VIMP08670 CYCSP45-201ENST00000402289 315 ntBASIC3.57□□□□□ -1.84
VIMP08670 AL356473.1-201ENST00000406203 1408 ntBASIC3.57□□□□□ -1.84
VIMP08670 METTL5-204ENST00000409340 472 ntTSL 5 BASIC3.57□□□□□ -1.84
VIMP08670 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC3.57□□□□□ -1.84
VIMP08670 AC245291.1-201ENST00000419501 328 ntBASIC3.57□□□□□ -1.84
VIMP08670 DUTP6-201ENST00000425573 462 ntBASIC3.57□□□□□ -1.84
VIMP08670 RPL18P10-201ENST00000425606 538 ntBASIC3.57□□□□□ -1.84
VIMP08670 MTCYBP45-201ENST00000435243 565 ntBASIC3.57□□□□□ -1.84
VIMP08670 HMGN2P20-201ENST00000437531 273 ntBASIC3.57□□□□□ -1.84
VIMP08670 MUPP-201ENST00000438111 566 ntBASIC3.57□□□□□ -1.84
VIMP08670 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.57□□□□□ -1.84
VIMP08670 CR769776.1-201ENST00000441254 787 ntBASIC3.57□□□□□ -1.84
VIMP08670 SETD6P1-201ENST00000444575 317 ntBASIC3.57□□□□□ -1.84
VIMP08670 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.57□□□□□ -1.84
VIMP08670 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.57□□□□□ -1.84
VIMP08670 RNU7-136P-201ENST00000458819 69 ntBASIC3.57□□□□□ -1.84
VIMP08670 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.57□□□□□ -1.84
VIMP08670 RPS4XP15-201ENST00000489210 795 ntBASIC3.57□□□□□ -1.84
VIMP08670 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.57□□□□□ -1.84
VIMP08670 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.57□□□□□ -1.84
VIMP08670 AC010587.2-201ENST00000511727 448 ntBASIC3.57□□□□□ -1.84
VIMP08670 AC108064.1-201ENST00000513791 460 ntBASIC3.57□□□□□ -1.84
VIMP08670 SNORA64.4-201ENST00000516632 81 ntBASIC3.57□□□□□ -1.84
VIMP08670 MRPL49P2-201ENST00000521066 465 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms