Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC2.74□□□□□ -1.97
HLA-DPB1P04440 AC084024.2-201ENST00000503480 791 ntBASIC2.74□□□□□ -1.97
HLA-DPB1P04440 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.74□□□□□ -1.97
HLA-DPB1P04440 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.74□□□□□ -1.97
HLA-DPB1P04440 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC2.74□□□□□ -1.97
HLA-DPB1P04440 AC019227.1-201ENST00000526902 510 ntBASIC2.74□□□□□ -1.97
HLA-DPB1P04440 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC2.74□□□□□ -1.97
HLA-DPB1P04440 AC087894.1-201ENST00000538359 518 ntBASIC2.74□□□□□ -1.97
HLA-DPB1P04440 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC2.74□□□□□ -1.97
HLA-DPB1P04440 AC087897.1-201ENST00000550134 156 ntBASIC2.74□□□□□ -1.97
HLA-DPB1P04440 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC2.74□□□□□ -1.97
HLA-DPB1P04440 MIR2682-201ENST00000580305 110 ntBASIC2.74□□□□□ -1.97
HLA-DPB1P04440 MAGOH2P-202ENST00000584384 429 ntBASIC2.74□□□□□ -1.97
HLA-DPB1P04440 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC2.74□□□□□ -1.97
HLA-DPB1P04440 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.74□□□□□ -1.97
HLA-DPB1P04440 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.74□□□□□ -1.97
HLA-DPB1P04440 AL513477.2-201ENST00000607858 568 ntBASIC2.74□□□□□ -1.97
HLA-DPB1P04440 AC124016.2-201ENST00000610058 665 ntBASIC2.74□□□□□ -1.97
HLA-DPB1P04440 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
HLA-DPB1P04440 Z99129.2-201ENST00000619967 314 ntBASIC2.74□□□□□ -1.97
HLA-DPB1P04440 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC2.74□□□□□ -1.97
HLA-DPB1P04440 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC2.74□□□□□ -1.97
HLA-DPB1P04440 MAPK10-362ENST00000641864 4484 ntBASIC2.74□□□□□ -1.97
HLA-DPB1P04440 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.74□□□□□ -1.97
HLA-DPB1P04440 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC2.74□□□□□ -1.97
HLA-DPB1P04440 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
HLA-DPB1P04440 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.74□□□□□ -1.97
HLA-DPB1P04440 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC2.74□□□□□ -1.97
HLA-DPB1P04440 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC2.73□□□□□ -1.97
HLA-DPB1P04440 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC2.73□□□□□ -1.97
HLA-DPB1P04440 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.73□□□□□ -1.97
HLA-DPB1P04440 ZNF33BP1-201ENST00000452497 1834 ntBASIC2.73□□□□□ -1.97
HLA-DPB1P04440 UBE2Q2P1-202ENST00000354771 883 ntBASIC2.73□□□□□ -1.97
HLA-DPB1P04440 SNORA7.2-201ENST00000364446 145 ntBASIC2.73□□□□□ -1.97
HLA-DPB1P04440 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
HLA-DPB1P04440 RNU6-657P-201ENST00000383904 107 ntBASIC2.73□□□□□ -1.97
HLA-DPB1P04440 RNU6-761P-201ENST00000384148 107 ntBASIC2.73□□□□□ -1.97
HLA-DPB1P04440 MIR34B-201ENST00000385076 84 ntBASIC2.73□□□□□ -1.97
HLA-DPB1P04440 MIR607-201ENST00000385241 96 ntBASIC2.73□□□□□ -1.97
HLA-DPB1P04440 MTND4LP20-201ENST00000402379 270 ntBASIC2.73□□□□□ -1.97
HLA-DPB1P04440 AL133264.1-201ENST00000407157 562 ntBASIC2.73□□□□□ -1.97
HLA-DPB1P04440 RNA5SP120-201ENST00000410900 112 ntBASIC2.73□□□□□ -1.97
HLA-DPB1P04440 EI24P1-201ENST00000416584 867 ntBASIC2.73□□□□□ -1.97
HLA-DPB1P04440 AC092634.6-201ENST00000418558 192 ntBASIC2.73□□□□□ -1.97
HLA-DPB1P04440 KRR1P1-201ENST00000419430 803 ntBASIC2.73□□□□□ -1.97
HLA-DPB1P04440 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC2.73□□□□□ -1.97
HLA-DPB1P04440 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC2.73□□□□□ -1.97
HLA-DPB1P04440 RAC1P8-201ENST00000427086 527 ntBASIC2.73□□□□□ -1.97
HLA-DPB1P04440 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC2.73□□□□□ -1.97
HLA-DPB1P04440 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC2.73□□□□□ -1.97
HLA-DPB1P04440 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC2.73□□□□□ -1.97
HLA-DPB1P04440 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC2.73□□□□□ -1.97
HLA-DPB1P04440 AC108734.1-201ENST00000439549 399 ntBASIC2.73□□□□□ -1.97
HLA-DPB1P04440 AL591503.2-201ENST00000442314 1005 ntBASIC2.73□□□□□ -1.97
HLA-DPB1P04440 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
HLA-DPB1P04440 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC2.73□□□□□ -1.97
HLA-DPB1P04440 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC2.73□□□□□ -1.97
HLA-DPB1P04440 AC034236.1-201ENST00000469891 373 ntBASIC2.73□□□□□ -1.97
HLA-DPB1P04440 RN7SL601P-201ENST00000471221 293 ntBASIC2.73□□□□□ -1.97
HLA-DPB1P04440 RPL23AP11-201ENST00000475260 469 ntBASIC2.73□□□□□ -1.97
HLA-DPB1P04440 RPL31P13-201ENST00000484151 370 ntBASIC2.73□□□□□ -1.97
HLA-DPB1P04440 RPL32P34-201ENST00000486380 400 ntBASIC2.73□□□□□ -1.97
HLA-DPB1P04440 DYNLL1P6-201ENST00000503440 264 ntBASIC2.73□□□□□ -1.97
HLA-DPB1P04440 AC110794.1-201ENST00000505816 425 ntBASIC2.73□□□□□ -1.97
HLA-DPB1P04440 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC2.73□□□□□ -1.97
HLA-DPB1P04440 AC069306.1-201ENST00000507006 843 ntBASIC2.73□□□□□ -1.97
HLA-DPB1P04440 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.73□□□□□ -1.97
HLA-DPB1P04440 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC2.73□□□□□ -1.97
HLA-DPB1P04440 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC2.73□□□□□ -1.97
HLA-DPB1P04440 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC2.73□□□□□ -1.97
HLA-DPB1P04440 AP004371.1-201ENST00000525240 214 ntBASIC2.73□□□□□ -1.97
HLA-DPB1P04440 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC2.73□□□□□ -1.97
HLA-DPB1P04440 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC2.73□□□□□ -1.97
HLA-DPB1P04440 AC126365.2-201ENST00000580630 379 ntBASIC2.73□□□□□ -1.97
HLA-DPB1P04440 AC083760.1-201ENST00000589621 670 ntBASIC2.73□□□□□ -1.97
HLA-DPB1P04440 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC2.73□□□□□ -1.97
HLA-DPB1P04440 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC2.73□□□□□ -1.97
HLA-DPB1P04440 AC124312.4-201ENST00000605533 310 ntBASIC2.73□□□□□ -1.97
HLA-DPB1P04440 AL583856.2-201ENST00000606298 543 ntBASIC2.73□□□□□ -1.97
HLA-DPB1P04440 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
HLA-DPB1P04440 AC126544.2-201ENST00000625174 749 ntBASIC2.73□□□□□ -1.97
HLA-DPB1P04440 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.72□□□□□ -1.97
HLA-DPB1P04440 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.72□□□□□ -1.97
HLA-DPB1P04440 MTND5P7-201ENST00000413558 1798 ntBASIC2.72□□□□□ -1.97
HLA-DPB1P04440 AC000367.1-201ENST00000452711 1766 ntBASIC2.72□□□□□ -1.97
HLA-DPB1P04440 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
HLA-DPB1P04440 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.72□□□□□ -1.97
HLA-DPB1P04440 RPL7P27-201ENST00000403775 720 ntBASIC2.72□□□□□ -1.97
HLA-DPB1P04440 AL023807.1-201ENST00000407932 359 ntBASIC2.72□□□□□ -1.97
HLA-DPB1P04440 AC096533.1-201ENST00000411645 353 ntBASIC2.72□□□□□ -1.97
HLA-DPB1P04440 RPS7P9-201ENST00000414704 586 ntBASIC2.72□□□□□ -1.97
HLA-DPB1P04440 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC2.72□□□□□ -1.97
HLA-DPB1P04440 AL451062.2-201ENST00000427515 271 ntBASIC2.72□□□□□ -1.97
HLA-DPB1P04440 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2.72□□□□□ -1.97
HLA-DPB1P04440 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
HLA-DPB1P04440 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.72□□□□□ -1.97
HLA-DPB1P04440 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.72□□□□□ -1.97
HLA-DPB1P04440 TAF8-207ENST00000482432 556 ntTSL 2 BASIC2.72□□□□□ -1.97
HLA-DPB1P04440 RN7SL20P-201ENST00000488827 297 ntBASIC2.72□□□□□ -1.97
HLA-DPB1P04440 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms