Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.66□□□□□ -1.82
VTNP04004 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.66□□□□□ -1.82
VTNP04004 PSMA2P3-201ENST00000429685 675 ntBASIC3.66□□□□□ -1.82
VTNP04004 MTND5P25-201ENST00000430499 799 ntBASIC3.66□□□□□ -1.82
VTNP04004 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.66□□□□□ -1.82
VTNP04004 MTCO2P20-201ENST00000437339 673 ntBASIC3.66□□□□□ -1.82
VTNP04004 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.66□□□□□ -1.82
VTNP04004 MTCO2P25-201ENST00000447065 681 ntBASIC3.66□□□□□ -1.82
VTNP04004 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC3.66□□□□□ -1.82
VTNP04004 AC146507.1-201ENST00000468335 354 ntBASIC3.66□□□□□ -1.82
VTNP04004 AC087879.1-201ENST00000474343 374 ntBASIC3.66□□□□□ -1.82
VTNP04004 FCF1P3-201ENST00000496394 590 ntBASIC3.66□□□□□ -1.82
VTNP04004 PRELID3BP7-201ENST00000503606 469 ntBASIC3.66□□□□□ -1.82
VTNP04004 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.66□□□□□ -1.82
VTNP04004 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.66□□□□□ -1.82
VTNP04004 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
VTNP04004 AC109445.1-201ENST00000512356 383 ntBASIC3.66□□□□□ -1.82
VTNP04004 AC018797.3-201ENST00000513388 1241 ntBASIC3.66□□□□□ -1.82
VTNP04004 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.66□□□□□ -1.82
VTNP04004 IGKV2-23-201ENST00000518729 323 ntBASIC3.66□□□□□ -1.82
VTNP04004 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.66□□□□□ -1.82
VTNP04004 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.66□□□□□ -1.82
VTNP04004 OR8L1P-201ENST00000534005 955 ntBASIC3.66□□□□□ -1.82
VTNP04004 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.66□□□□□ -1.82
VTNP04004 AC009094.1-201ENST00000564443 426 ntBASIC3.66□□□□□ -1.82
VTNP04004 AF131215.7-201ENST00000602443 707 ntBASIC3.66□□□□□ -1.82
VTNP04004 AC021171.1-201ENST00000603137 706 ntBASIC3.66□□□□□ -1.82
VTNP04004 AL031281.1-201ENST00000604049 488 ntBASIC3.66□□□□□ -1.82
VTNP04004 AC025811.1-201ENST00000604312 472 ntBASIC3.66□□□□□ -1.82
VTNP04004 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.66□□□□□ -1.82
VTNP04004 AC007490.1-201ENST00000624321 703 ntBASIC3.66□□□□□ -1.82
VTNP04004 AC098679.5-201ENST00000624394 571 ntBASIC3.66□□□□□ -1.82
VTNP04004 MIR1322-201ENST00000638013 71 ntBASIC3.66□□□□□ -1.82
VTNP04004 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
VTNP04004 AC104454.1-201ENST00000421341 1401 ntBASIC3.66□□□□□ -1.82
VTNP04004 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.66□□□□□ -1.82
VTNP04004 DBF4P1-201ENST00000412976 1892 ntBASIC3.66□□□□□ -1.82
VTNP04004 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
VTNP04004 DCAF13P1-201ENST00000495256 1330 ntBASIC3.66□□□□□ -1.82
VTNP04004 AC107982.1-201ENST00000507171 1300 ntBASIC3.66□□□□□ -1.82
VTNP04004 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
VTNP04004 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
VTNP04004 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
VTNP04004 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
VTNP04004 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
VTNP04004 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
VTNP04004 AL121978.1-201ENST00000402778 359 ntBASIC3.65□□□□□ -1.83
VTNP04004 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.65□□□□□ -1.83
VTNP04004 AMD1P2-201ENST00000412936 992 ntBASIC3.65□□□□□ -1.83
VTNP04004 AC092634.6-201ENST00000418558 192 ntBASIC3.65□□□□□ -1.83
VTNP04004 AC005345.1-201ENST00000431868 217 ntBASIC3.65□□□□□ -1.83
VTNP04004 RPL7P34-201ENST00000433316 712 ntBASIC3.65□□□□□ -1.83
VTNP04004 AC006028.1-201ENST00000438379 402 ntBASIC3.65□□□□□ -1.83
VTNP04004 AC127537.2-201ENST00000439258 465 ntBASIC3.65□□□□□ -1.83
VTNP04004 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
VTNP04004 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.65□□□□□ -1.83
VTNP04004 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.65□□□□□ -1.83
VTNP04004 RPL29P29-201ENST00000448725 423 ntBASIC3.65□□□□□ -1.83
VTNP04004 ANKRD26P4-201ENST00000455755 950 ntBASIC3.65□□□□□ -1.83
VTNP04004 RPS29P2-201ENST00000479278 136 ntBASIC3.65□□□□□ -1.83
VTNP04004 AC013828.1-201ENST00000481845 158 ntBASIC3.65□□□□□ -1.83
VTNP04004 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.65□□□□□ -1.83
VTNP04004 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.65□□□□□ -1.83
VTNP04004 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.65□□□□□ -1.83
VTNP04004 MTCO1P30-201ENST00000515244 580 ntBASIC3.65□□□□□ -1.83
VTNP04004 MTATP6P15-201ENST00000527233 835 ntBASIC3.65□□□□□ -1.83
VTNP04004 AP003461.1-201ENST00000528866 78 ntBASIC3.65□□□□□ -1.83
VTNP04004 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.65□□□□□ -1.83
VTNP04004 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.65□□□□□ -1.83
VTNP04004 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.65□□□□□ -1.83
VTNP04004 MTCYBP27-201ENST00000555160 670 ntBASIC3.65□□□□□ -1.83
VTNP04004 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.65□□□□□ -1.83
VTNP04004 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
VTNP04004 AC074051.3-201ENST00000570238 358 ntBASIC3.65□□□□□ -1.83
VTNP04004 MIR4738-201ENST00000579134 87 ntBASIC3.65□□□□□ -1.83
VTNP04004 SNORD39.3-201ENST00000584451 71 ntBASIC3.65□□□□□ -1.83
VTNP04004 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
VTNP04004 AC006539.2-201ENST00000601729 572 ntBASIC3.65□□□□□ -1.83
VTNP04004 YWHAQP7-201ENST00000603536 658 ntBASIC3.65□□□□□ -1.83
VTNP04004 RNA5SP108-201ENST00000605921 117 ntBASIC3.65□□□□□ -1.83
VTNP04004 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.65□□□□□ -1.83
VTNP04004 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.65□□□□□ -1.83
VTNP04004 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.65□□□□□ -1.83
VTNP04004 AC006065.5-201ENST00000623427 349 ntBASIC3.65□□□□□ -1.83
VTNP04004 MTND2P41-201ENST00000637599 773 ntBASIC3.65□□□□□ -1.83
VTNP04004 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.65□□□□□ -1.83
VTNP04004 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
VTNP04004 NF1-214ENST00000490416 1329 ntTSL 3 BASIC3.65□□□□□ -1.83
VTNP04004 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
VTNP04004 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
VTNP04004 ELL2P4-201ENST00000446870 1376 ntBASIC3.64□□□□□ -1.83
VTNP04004 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
VTNP04004 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.64□□□□□ -1.83
VTNP04004 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
VTNP04004 RNU1-70P-201ENST00000362618 164 ntBASIC3.64□□□□□ -1.83
VTNP04004 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.64□□□□□ -1.83
VTNP04004 RNU6-441P-201ENST00000384545 106 ntBASIC3.64□□□□□ -1.83
VTNP04004 RNY3P9-201ENST00000384727 106 ntBASIC3.64□□□□□ -1.83
VTNP04004 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC3.64□□□□□ -1.83
VTNP04004 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms