Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AC244517.1-201ENST00000606030 2086 ntBASIC2.46□□□□□ -2.01
HLA-DQA1P01909 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
HLA-DQA1P01909 AL645568.2-201ENST00000432815 1337 ntBASIC2.46□□□□□ -2.02
HLA-DQA1P01909 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.46□□□□□ -2.02
HLA-DQA1P01909 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
HLA-DQA1P01909 snoZ40.1-201ENST00000364540 72 ntBASIC2.46□□□□□ -2.02
HLA-DQA1P01909 RNU1-64P-201ENST00000365443 163 ntBASIC2.46□□□□□ -2.02
HLA-DQA1P01909 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
HLA-DQA1P01909 AL359837.1-201ENST00000381357 287 ntBASIC2.46□□□□□ -2.02
HLA-DQA1P01909 Y_RNA.408-201ENST00000383987 102 ntBASIC2.46□□□□□ -2.02
HLA-DQA1P01909 RNU6-1181P-201ENST00000384191 106 ntBASIC2.46□□□□□ -2.02
HLA-DQA1P01909 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
HLA-DQA1P01909 RNU6ATAC-201ENST00000408749 126 ntBASIC2.46□□□□□ -2.02
HLA-DQA1P01909 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
HLA-DQA1P01909 RNU2-42P-201ENST00000410697 113 ntBASIC2.46□□□□□ -2.02
HLA-DQA1P01909 CYCSP19-201ENST00000411715 316 ntBASIC2.46□□□□□ -2.02
HLA-DQA1P01909 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC2.46□□□□□ -2.02
HLA-DQA1P01909 AL161449.1-201ENST00000414531 1199 ntBASIC2.46□□□□□ -2.02
HLA-DQA1P01909 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.46□□□□□ -2.02
HLA-DQA1P01909 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.46□□□□□ -2.02
HLA-DQA1P01909 AL390023.1-201ENST00000428836 262 ntBASIC2.46□□□□□ -2.02
HLA-DQA1P01909 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC2.46□□□□□ -2.02
HLA-DQA1P01909 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC2.46□□□□□ -2.02
HLA-DQA1P01909 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC2.46□□□□□ -2.02
HLA-DQA1P01909 RPL7P52-201ENST00000449200 742 ntBASIC2.46□□□□□ -2.02
HLA-DQA1P01909 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
HLA-DQA1P01909 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.46□□□□□ -2.02
HLA-DQA1P01909 RPS27AP1-201ENST00000475545 471 ntBASIC2.46□□□□□ -2.02
HLA-DQA1P01909 AL024509.2-201ENST00000493462 493 ntBASIC2.46□□□□□ -2.02
HLA-DQA1P01909 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC2.46□□□□□ -2.02
HLA-DQA1P01909 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC2.46□□□□□ -2.02
HLA-DQA1P01909 SCARNA14-201ENST00000516903 136 ntBASIC2.46□□□□□ -2.02
HLA-DQA1P01909 RNU1-45P-201ENST00000517191 141 ntBASIC2.46□□□□□ -2.02
HLA-DQA1P01909 RNU6-1261P-201ENST00000517194 104 ntBASIC2.46□□□□□ -2.02
HLA-DQA1P01909 AC091163.3-201ENST00000518269 1144 ntBASIC2.46□□□□□ -2.02
HLA-DQA1P01909 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.46□□□□□ -2.02
HLA-DQA1P01909 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC2.46□□□□□ -2.02
HLA-DQA1P01909 AP001189.2-201ENST00000527320 189 ntBASIC2.46□□□□□ -2.02
HLA-DQA1P01909 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC2.46□□□□□ -2.02
HLA-DQA1P01909 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.46□□□□□ -2.02
HLA-DQA1P01909 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC2.46□□□□□ -2.02
HLA-DQA1P01909 AC008127.2-201ENST00000549925 1075 ntBASIC2.46□□□□□ -2.02
HLA-DQA1P01909 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC2.46□□□□□ -2.02
HLA-DQA1P01909 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.46□□□□□ -2.02
HLA-DQA1P01909 YWHAZP1-201ENST00000556286 722 ntBASIC2.46□□□□□ -2.02
HLA-DQA1P01909 GTF2IP8-201ENST00000560687 584 ntBASIC2.46□□□□□ -2.02
HLA-DQA1P01909 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.46□□□□□ -2.02
HLA-DQA1P01909 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC2.46□□□□□ -2.02
HLA-DQA1P01909 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC2.46□□□□□ -2.02
HLA-DQA1P01909 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC2.46□□□□□ -2.02
HLA-DQA1P01909 MIR3912-201ENST00000577566 105 ntBASIC2.46□□□□□ -2.02
HLA-DQA1P01909 MTCO3P13-201ENST00000577757 781 ntBASIC2.46□□□□□ -2.02
HLA-DQA1P01909 AC015917.1-201ENST00000579654 510 ntBASIC2.46□□□□□ -2.02
HLA-DQA1P01909 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC2.46□□□□□ -2.02
HLA-DQA1P01909 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC2.46□□□□□ -2.02
HLA-DQA1P01909 AL158050.2-201ENST00000605336 568 ntBASIC2.46□□□□□ -2.02
HLA-DQA1P01909 AC107871.2-201ENST00000612894 502 ntBASIC2.46□□□□□ -2.02
HLA-DQA1P01909 AC231759.1-201ENST00000616455 597 ntBASIC2.46□□□□□ -2.02
HLA-DQA1P01909 AC123767.1-202ENST00000620407 817 ntBASIC2.46□□□□□ -2.02
HLA-DQA1P01909 AC009269.6-201ENST00000621778 588 ntBASIC2.46□□□□□ -2.02
HLA-DQA1P01909 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
HLA-DQA1P01909 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.46□□□□□ -2.02
HLA-DQA1P01909 CYP3A51P-201ENST00000633513 256 ntBASIC2.46□□□□□ -2.02
HLA-DQA1P01909 AC013437.2-201ENST00000639587 677 ntBASIC2.46□□□□□ -2.02
HLA-DQA1P01909 MKKS-204ENST00000639674 192 ntBASIC2.46□□□□□ -2.02
HLA-DQA1P01909 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC2.46□□□□□ -2.02
HLA-DQA1P01909 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.46□□□□□ -2.02
HLA-DQA1P01909 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.46□□□□□ -2.02
HLA-DQA1P01909 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC2.45□□□□□ -2.02
HLA-DQA1P01909 GDI2P1-201ENST00000429312 1336 ntBASIC2.45□□□□□ -2.02
HLA-DQA1P01909 HSP90AA4P-202ENST00000506915 2228 ntBASIC2.45□□□□□ -2.02
HLA-DQA1P01909 AC004925.1-201ENST00000624256 2706 ntBASIC2.45□□□□□ -2.02
HLA-DQA1P01909 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
HLA-DQA1P01909 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
HLA-DQA1P01909 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
HLA-DQA1P01909 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
HLA-DQA1P01909 U8.9-201ENST00000365667 134 ntBASIC2.45□□□□□ -2.02
HLA-DQA1P01909 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.45□□□□□ -2.02
HLA-DQA1P01909 NFIB-202ENST00000380924 840 ntTSL 5 BASIC2.45□□□□□ -2.02
HLA-DQA1P01909 AL450338.1-201ENST00000407987 512 ntBASIC2.45□□□□□ -2.02
HLA-DQA1P01909 SNORD88.1-201ENST00000408684 91 ntBASIC2.45□□□□□ -2.02
HLA-DQA1P01909 RNU2-71P-201ENST00000411395 189 ntBASIC2.45□□□□□ -2.02
HLA-DQA1P01909 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.45□□□□□ -2.02
HLA-DQA1P01909 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC2.45□□□□□ -2.02
HLA-DQA1P01909 RPS7P15-201ENST00000415804 584 ntBASIC2.45□□□□□ -2.02
HLA-DQA1P01909 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC2.45□□□□□ -2.02
HLA-DQA1P01909 DPPA2P1-201ENST00000428060 556 ntBASIC2.45□□□□□ -2.02
HLA-DQA1P01909 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.45□□□□□ -2.02
HLA-DQA1P01909 HIGD1AP11-201ENST00000438361 280 ntBASIC2.45□□□□□ -2.02
HLA-DQA1P01909 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.45□□□□□ -2.02
HLA-DQA1P01909 ZNF736P1Y-201ENST00000440402 1276 ntBASIC2.45□□□□□ -2.02
HLA-DQA1P01909 RABEPKP1-201ENST00000440529 1026 ntBASIC2.45□□□□□ -2.02
HLA-DQA1P01909 MTATP6P14-201ENST00000455189 673 ntBASIC2.45□□□□□ -2.02
HLA-DQA1P01909 AC079203.1-201ENST00000487972 404 ntBASIC2.45□□□□□ -2.02
HLA-DQA1P01909 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC2.45□□□□□ -2.02
HLA-DQA1P01909 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.45□□□□□ -2.02
HLA-DQA1P01909 MTND4LP22-201ENST00000508209 276 ntBASIC2.45□□□□□ -2.02
HLA-DQA1P01909 AC010460.2-201ENST00000509054 677 ntBASIC2.45□□□□□ -2.02
HLA-DQA1P01909 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC2.45□□□□□ -2.02
HLA-DQA1P01909 AC087808.1-201ENST00000520501 361 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 151.5 ms