Protein–RNA interactions for Protein: O95639

CPSF4, Cleavage and polyadenylation specificity factor subunit 4, humanhuman

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4O95639 RNU1-100P-201ENST00000365255 165 ntBASIC2.42□□□□□ -2.02
CPSF4O95639 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.42□□□□□ -2.02
CPSF4O95639 MIR128-1-201ENST00000384921 82 ntBASIC2.42□□□□□ -2.02
CPSF4O95639 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC2.42□□□□□ -2.02
CPSF4O95639 AL121882.1-201ENST00000422893 417 ntBASIC2.42□□□□□ -2.02
CPSF4O95639 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC2.42□□□□□ -2.02
CPSF4O95639 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.42□□□□□ -2.02
CPSF4O95639 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC2.42□□□□□ -2.02
CPSF4O95639 HSD52-202ENST00000436225 772 ntTSL 3 BASIC2.42□□□□□ -2.02
CPSF4O95639 FABP5P3-201ENST00000437960 408 ntBASIC2.42□□□□□ -2.02
CPSF4O95639 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.42□□□□□ -2.02
CPSF4O95639 RPL23AP15-201ENST00000450202 459 ntBASIC2.42□□□□□ -2.02
CPSF4O95639 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC2.42□□□□□ -2.02
CPSF4O95639 AC092754.2-201ENST00000463506 460 ntBASIC2.42□□□□□ -2.02
CPSF4O95639 NCOR1P1-202ENST00000486162 291 ntBASIC2.42□□□□□ -2.02
CPSF4O95639 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CPSF4O95639 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC2.42□□□□□ -2.02
CPSF4O95639 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC2.42□□□□□ -2.02
CPSF4O95639 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC2.42□□□□□ -2.02
CPSF4O95639 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CPSF4O95639 RNA5SP282-201ENST00000516355 108 ntBASIC2.42□□□□□ -2.02
CPSF4O95639 COX6CP8-201ENST00000522620 226 ntBASIC2.42□□□□□ -2.02
CPSF4O95639 AC010198.2-201ENST00000550612 259 ntBASIC2.42□□□□□ -2.02
CPSF4O95639 SERPINE4P-201ENST00000554978 281 ntBASIC2.42□□□□□ -2.02
CPSF4O95639 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.42□□□□□ -2.02
CPSF4O95639 AC138761.3-201ENST00000579993 334 ntBASIC2.42□□□□□ -2.02
CPSF4O95639 AC010928.3-201ENST00000587712 541 ntBASIC2.42□□□□□ -2.02
CPSF4O95639 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC2.42□□□□□ -2.02
CPSF4O95639 AC004832.5-201ENST00000608677 401 ntBASIC2.42□□□□□ -2.02
CPSF4O95639 AC092608.3-201ENST00000625017 386 ntBASIC2.42□□□□□ -2.02
CPSF4O95639 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.42□□□□□ -2.02
CPSF4O95639 FAM157B-203ENST00000639350 358 ntBASIC2.42□□□□□ -2.02
CPSF4O95639 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CPSF4O95639 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
CPSF4O95639 AC092447.7-201ENST00000422212 1621 ntBASIC2.42□□□□□ -2.02
CPSF4O95639 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC2.42□□□□□ -2.02
CPSF4O95639 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.41□□□□□ -2.02
CPSF4O95639 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.41□□□□□ -2.02
CPSF4O95639 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
CPSF4O95639 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CPSF4O95639 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CPSF4O95639 MIR208A-201ENST00000362287 71 ntBASIC2.41□□□□□ -2.02
CPSF4O95639 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC2.41□□□□□ -2.02
CPSF4O95639 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC2.41□□□□□ -2.02
CPSF4O95639 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC2.41□□□□□ -2.02
CPSF4O95639 YWHAZP8-201ENST00000436935 731 ntBASIC2.41□□□□□ -2.02
CPSF4O95639 AC233982.1-201ENST00000451247 436 ntBASIC2.41□□□□□ -2.02
CPSF4O95639 BX276092.4-201ENST00000452056 248 ntBASIC2.41□□□□□ -2.02
CPSF4O95639 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC2.41□□□□□ -2.02
CPSF4O95639 AC015724.1-201ENST00000478577 156 ntBASIC2.41□□□□□ -2.02
CPSF4O95639 RPL21P47-201ENST00000483696 477 ntBASIC2.41□□□□□ -2.02
CPSF4O95639 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC2.41□□□□□ -2.02
CPSF4O95639 AC008885.2-201ENST00000509506 930 ntBASIC2.41□□□□□ -2.02
CPSF4O95639 AC104108.1-201ENST00000509930 412 ntBASIC2.41□□□□□ -2.02
CPSF4O95639 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.41□□□□□ -2.02
CPSF4O95639 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC2.41□□□□□ -2.02
CPSF4O95639 MTND2P31-201ENST00000512602 616 ntBASIC2.41□□□□□ -2.02
CPSF4O95639 SNORA70.24-201ENST00000517233 118 ntBASIC2.41□□□□□ -2.02
CPSF4O95639 RNU4-60P-201ENST00000517239 135 ntBASIC2.41□□□□□ -2.02
CPSF4O95639 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC2.41□□□□□ -2.02
CPSF4O95639 AC090136.1-201ENST00000520009 240 ntBASIC2.41□□□□□ -2.02
CPSF4O95639 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC2.41□□□□□ -2.02
CPSF4O95639 AP000916.1-201ENST00000533869 835 ntBASIC2.41□□□□□ -2.02
CPSF4O95639 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC2.41□□□□□ -2.02
CPSF4O95639 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC2.41□□□□□ -2.02
CPSF4O95639 AC074029.1-201ENST00000552531 1044 ntBASIC2.41□□□□□ -2.02
CPSF4O95639 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC2.41□□□□□ -2.02
CPSF4O95639 AL157394.1-201ENST00000562983 1224 ntBASIC2.41□□□□□ -2.02
CPSF4O95639 AC079148.1-201ENST00000565944 819 ntBASIC2.41□□□□□ -2.02
CPSF4O95639 AC034268.2-201ENST00000571784 482 ntBASIC2.41□□□□□ -2.02
CPSF4O95639 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.41□□□□□ -2.02
CPSF4O95639 AC060766.3-201ENST00000591442 263 ntBASIC2.41□□□□□ -2.02
CPSF4O95639 AC008687.2-201ENST00000597865 520 ntBASIC2.41□□□□□ -2.02
CPSF4O95639 AC091488.1-201ENST00000604239 660 ntBASIC2.41□□□□□ -2.02
CPSF4O95639 HMGN2P28-201ENST00000606102 262 ntBASIC2.41□□□□□ -2.02
CPSF4O95639 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC2.41□□□□□ -2.02
CPSF4O95639 AC245100.7-201ENST00000609678 442 ntBASIC2.41□□□□□ -2.02
CPSF4O95639 AC006213.5-201ENST00000619673 288 ntBASIC2.41□□□□□ -2.02
CPSF4O95639 AC097460.3-201ENST00000623099 442 ntBASIC2.41□□□□□ -2.02
CPSF4O95639 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.41□□□□□ -2.02
CPSF4O95639 CUL1P1-201ENST00000509510 2425 ntBASIC2.41□□□□□ -2.02
CPSF4O95639 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.41□□□□□ -2.02
CPSF4O95639 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CPSF4O95639 AC046144.1-201ENST00000478559 1853 ntBASIC2.41□□□□□ -2.02
CPSF4O95639 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.41□□□□□ -2.02
CPSF4O95639 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.02
CPSF4O95639 MAPK6PS3-201ENST00000403865 2162 ntBASIC2.4□□□□□ -2.02
CPSF4O95639 MTND5P3-201ENST00000438536 1800 ntBASIC2.4□□□□□ -2.02
CPSF4O95639 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
CPSF4O95639 AC006378.2-201ENST00000623178 2476 ntBASIC2.4□□□□□ -2.03
CPSF4O95639 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.4□□□□□ -2.03
CPSF4O95639 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
CPSF4O95639 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
CPSF4O95639 MIR16-2-201ENST00000362117 81 ntBASIC2.4□□□□□ -2.03
CPSF4O95639 RNU6-600P-201ENST00000362524 99 ntBASIC2.4□□□□□ -2.03
CPSF4O95639 RNU6-481P-201ENST00000384194 107 ntBASIC2.4□□□□□ -2.03
CPSF4O95639 SNORA51.12-201ENST00000384448 134 ntBASIC2.4□□□□□ -2.03
CPSF4O95639 MIR9-1-201ENST00000385198 89 ntBASIC2.4□□□□□ -2.03
CPSF4O95639 SNORA48.2-201ENST00000390926 124 ntBASIC2.4□□□□□ -2.03
CPSF4O95639 SNORA26.7-201ENST00000391288 122 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 134.7 ms