Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 NBEAP1-201ENST00000554452 979 ntBASIC1.89□□□□□ -2.11
SIX6O95475 DNAJC8P1-201ENST00000554535 372 ntBASIC1.89□□□□□ -2.11
SIX6O95475 CKS1BP1-201ENST00000555221 240 ntBASIC1.89□□□□□ -2.11
SIX6O95475 AC012213.4-201ENST00000606457 354 ntBASIC1.89□□□□□ -2.11
SIX6O95475 AL161734.1-201ENST00000609720 557 ntBASIC1.89□□□□□ -2.11
SIX6O95475 AC055764.2-201ENST00000610089 670 ntBASIC1.89□□□□□ -2.11
SIX6O95475 MIR6748-201ENST00000610433 71 ntBASIC1.89□□□□□ -2.11
SIX6O95475 AC245389.2-201ENST00000616023 576 ntBASIC1.89□□□□□ -2.11
SIX6O95475 AC243756.2-201ENST00000618406 463 ntBASIC1.89□□□□□ -2.11
SIX6O95475 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC1.89□□□□□ -2.11
SIX6O95475 AC242843.1-201ENST00000618702 573 ntBASIC1.89□□□□□ -2.11
SIX6O95475 U4.3-201ENST00000621047 82 ntBASIC1.89□□□□□ -2.11
SIX6O95475 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC1.88□□□□□ -2.11
SIX6O95475 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC1.88□□□□□ -2.11
SIX6O95475 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC1.88□□□□□ -2.11
SIX6O95475 OR5H2-201ENST00000355273 945 ntBASIC1.88□□□□□ -2.11
SIX6O95475 RNA5SP160-201ENST00000364866 120 ntBASIC1.88□□□□□ -2.11
SIX6O95475 RNVU1-14-201ENST00000384770 164 ntBASIC1.88□□□□□ -2.11
SIX6O95475 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC1.88□□□□□ -2.11
SIX6O95475 AC233728.2-201ENST00000425348 757 ntBASIC1.88□□□□□ -2.11
SIX6O95475 PSMA2P3-201ENST00000429685 675 ntBASIC1.88□□□□□ -2.11
SIX6O95475 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC1.88□□□□□ -2.11
SIX6O95475 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC1.88□□□□□ -2.11
SIX6O95475 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC1.88□□□□□ -2.11
SIX6O95475 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC1.88□□□□□ -2.11
SIX6O95475 AC108734.3-201ENST00000481241 1165 ntBASIC1.88□□□□□ -2.11
SIX6O95475 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
SIX6O95475 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC1.88□□□□□ -2.11
SIX6O95475 RNA5SP341-201ENST00000516261 117 ntBASIC1.88□□□□□ -2.11
SIX6O95475 DUXAP2-201ENST00000519198 589 ntBASIC1.88□□□□□ -2.11
SIX6O95475 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC1.88□□□□□ -2.11
SIX6O95475 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
SIX6O95475 AC008083.2-201ENST00000546707 476 ntBASIC1.88□□□□□ -2.11
SIX6O95475 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
SIX6O95475 AL121594.4-201ENST00000556211 1196 ntBASIC1.88□□□□□ -2.11
SIX6O95475 AL049874.4-201ENST00000557593 255 ntBASIC1.88□□□□□ -2.11
SIX6O95475 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC1.88□□□□□ -2.11
SIX6O95475 AC105137.2-201ENST00000569073 466 ntBASIC1.88□□□□□ -2.11
SIX6O95475 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC1.88□□□□□ -2.11
SIX6O95475 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC1.88□□□□□ -2.11
SIX6O95475 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC1.88□□□□□ -2.11
SIX6O95475 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC1.88□□□□□ -2.11
SIX6O95475 AC125494.3-201ENST00000602759 455 ntBASIC1.88□□□□□ -2.11
SIX6O95475 YPEL5P2-201ENST00000605553 359 ntBASIC1.88□□□□□ -2.11
SIX6O95475 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC1.88□□□□□ -2.11
SIX6O95475 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC1.88□□□□□ -2.11
SIX6O95475 VIS1.1-201ENST00000610517 203 ntBASIC1.88□□□□□ -2.11
SIX6O95475 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
SIX6O95475 AC013562.2-201ENST00000611632 603 ntBASIC1.88□□□□□ -2.11
SIX6O95475 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
SIX6O95475 RMST_5.1-201ENST00000618704 126 ntBASIC1.88□□□□□ -2.11
SIX6O95475 AC007342.8-201ENST00000623278 678 ntBASIC1.88□□□□□ -2.11
SIX6O95475 FTO-223ENST00000640179 210 ntTSL 5 BASIC1.88□□□□□ -2.11
SIX6O95475 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC1.88□□□□□ -2.11
SIX6O95475 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC1.88□□□□□ -2.11
SIX6O95475 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC1.88□□□□□ -2.11
SIX6O95475 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
SIX6O95475 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC1.87□□□□□ -2.11
SIX6O95475 AC090740.1-201ENST00000623193 2262 ntBASIC1.87□□□□□ -2.11
SIX6O95475 AL512646.1-201ENST00000269395 1077 ntBASIC1.87□□□□□ -2.11
SIX6O95475 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
SIX6O95475 OR56A5-201ENST00000340110 738 ntBASIC1.87□□□□□ -2.11
SIX6O95475 SNORA14A-201ENST00000364773 135 ntBASIC1.87□□□□□ -2.11
SIX6O95475 AL360182.1-201ENST00000397433 468 ntBASIC1.87□□□□□ -2.11
SIX6O95475 AL591416.1-201ENST00000404015 867 ntBASIC1.87□□□□□ -2.11
SIX6O95475 RAB28P1-201ENST00000411517 641 ntBASIC1.87□□□□□ -2.11
SIX6O95475 HMGB1P11-201ENST00000413899 637 ntBASIC1.87□□□□□ -2.11
SIX6O95475 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC1.87□□□□□ -2.11
SIX6O95475 TRAPPC2P4-201ENST00000421750 331 ntBASIC1.87□□□□□ -2.11
SIX6O95475 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.87□□□□□ -2.11
SIX6O95475 MTATP6P11-201ENST00000428071 670 ntBASIC1.87□□□□□ -2.11
SIX6O95475 MTCYBP29-201ENST00000436327 1006 ntBASIC1.87□□□□□ -2.11
SIX6O95475 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC1.87□□□□□ -2.11
SIX6O95475 AL021397.1-201ENST00000451806 248 ntBASIC1.87□□□□□ -2.11
SIX6O95475 AL024509.2-201ENST00000493462 493 ntBASIC1.87□□□□□ -2.11
SIX6O95475 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC1.87□□□□□ -2.11
SIX6O95475 AC008413.1-201ENST00000511864 177 ntBASIC1.87□□□□□ -2.11
SIX6O95475 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC1.87□□□□□ -2.11
SIX6O95475 SNORA31.1-201ENST00000515993 133 ntBASIC1.87□□□□□ -2.11
SIX6O95475 SNORA31.5-201ENST00000516190 133 ntBASIC1.87□□□□□ -2.11
SIX6O95475 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC1.87□□□□□ -2.11
SIX6O95475 AP003385.6-201ENST00000531603 374 ntBASIC1.87□□□□□ -2.11
SIX6O95475 AC022080.3-201ENST00000544433 482 ntBASIC1.87□□□□□ -2.11
SIX6O95475 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.87□□□□□ -2.11
SIX6O95475 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC1.87□□□□□ -2.11
SIX6O95475 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC1.87□□□□□ -2.11
SIX6O95475 AC002984.1-201ENST00000591692 448 ntBASIC1.87□□□□□ -2.11
SIX6O95475 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC1.87□□□□□ -2.11
SIX6O95475 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC1.87□□□□□ -2.11
SIX6O95475 AC092954.1-201ENST00000609121 445 ntBASIC1.87□□□□□ -2.11
SIX6O95475 uc_338.20-201ENST00000621563 178 ntBASIC1.87□□□□□ -2.11
SIX6O95475 MIR6766-201ENST00000622641 72 ntBASIC1.87□□□□□ -2.11
SIX6O95475 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC1.87□□□□□ -2.11
SIX6O95475 HSPE1P11-201ENST00000339579 310 ntBASIC1.86□□□□□ -2.11
SIX6O95475 RNU6-50P-201ENST00000362356 103 ntBASIC1.86□□□□□ -2.11
SIX6O95475 RNU6-1027P-201ENST00000383998 107 ntBASIC1.86□□□□□ -2.11
SIX6O95475 SNORA6-201ENST00000384033 151 ntBASIC1.86□□□□□ -2.11
SIX6O95475 AC025750.1-201ENST00000399891 379 ntBASIC1.86□□□□□ -2.11
SIX6O95475 AL139039.1-201ENST00000401900 692 ntBASIC1.86□□□□□ -2.11
SIX6O95475 RN7SKP27-201ENST00000410684 333 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms