Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.62□□□□□ -1.83
SIX3O95343 AC097478.2-201ENST00000610572 514 ntBASIC3.62□□□□□ -1.83
SIX3O95343 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.62□□□□□ -1.83
SIX3O95343 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
SIX3O95343 AL360181.4-201ENST00000621752 134 ntBASIC3.62□□□□□ -1.83
SIX3O95343 AL356585.4-201ENST00000623078 1229 ntBASIC3.62□□□□□ -1.83
SIX3O95343 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.62□□□□□ -1.83
SIX3O95343 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.62□□□□□ -1.83
SIX3O95343 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SIX3O95343 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SIX3O95343 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.62□□□□□ -1.83
SIX3O95343 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.62□□□□□ -1.83
SIX3O95343 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.61□□□□□ -1.83
SIX3O95343 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
SIX3O95343 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
SIX3O95343 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
SIX3O95343 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
SIX3O95343 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
SIX3O95343 DHFRP6-201ENST00000401776 268 ntBASIC3.61□□□□□ -1.83
SIX3O95343 SNORA3.3-201ENST00000408712 125 ntBASIC3.61□□□□□ -1.83
SIX3O95343 OR1AA1P-201ENST00000419597 916 ntBASIC3.61□□□□□ -1.83
SIX3O95343 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.61□□□□□ -1.83
SIX3O95343 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.61□□□□□ -1.83
SIX3O95343 SDCBPP1-201ENST00000440192 890 ntBASIC3.61□□□□□ -1.83
SIX3O95343 TRGVB-201ENST00000453257 471 ntBASIC3.61□□□□□ -1.83
SIX3O95343 NANOGP10-201ENST00000453325 895 ntBASIC3.61□□□□□ -1.83
SIX3O95343 Z82190.1-201ENST00000454534 490 ntBASIC3.61□□□□□ -1.83
SIX3O95343 HMGN2P16-201ENST00000456802 261 ntBASIC3.61□□□□□ -1.83
SIX3O95343 USP9YP25-201ENST00000457708 443 ntBASIC3.61□□□□□ -1.83
SIX3O95343 AC097493.1-201ENST00000463958 372 ntBASIC3.61□□□□□ -1.83
SIX3O95343 RPS23P3-201ENST00000470993 430 ntBASIC3.61□□□□□ -1.83
SIX3O95343 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.61□□□□□ -1.83
SIX3O95343 AC096751.1-202ENST00000502691 1067 ntBASIC3.61□□□□□ -1.83
SIX3O95343 AC010460.1-201ENST00000507087 466 ntBASIC3.61□□□□□ -1.83
SIX3O95343 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.61□□□□□ -1.83
SIX3O95343 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.61□□□□□ -1.83
SIX3O95343 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.61□□□□□ -1.83
SIX3O95343 RNU6-1095P-201ENST00000516148 108 ntBASIC3.61□□□□□ -1.83
SIX3O95343 RNU6-311P-201ENST00000516224 102 ntBASIC3.61□□□□□ -1.83
SIX3O95343 RNU6-150P-201ENST00000516237 95 ntBASIC3.61□□□□□ -1.83
SIX3O95343 RNU1-103P-201ENST00000516502 125 ntBASIC3.61□□□□□ -1.83
SIX3O95343 OR5AK1P-201ENST00000524837 922 ntBASIC3.61□□□□□ -1.83
SIX3O95343 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.61□□□□□ -1.83
SIX3O95343 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.61□□□□□ -1.83
SIX3O95343 AC106782.4-201ENST00000568264 210 ntBASIC3.61□□□□□ -1.83
SIX3O95343 AC090615.1-201ENST00000577519 154 ntBASIC3.61□□□□□ -1.83
SIX3O95343 MIR4286-201ENST00000580651 93 ntBASIC3.61□□□□□ -1.83
SIX3O95343 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.61□□□□□ -1.83
SIX3O95343 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC3.61□□□□□ -1.83
SIX3O95343 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC3.61□□□□□ -1.83
SIX3O95343 TUG1_1.1-201ENST00000610654 145 ntBASIC3.61□□□□□ -1.83
SIX3O95343 MIR6875-201ENST00000617506 72 ntBASIC3.61□□□□□ -1.83
SIX3O95343 AC015967.1-201ENST00000619893 476 ntBASIC3.61□□□□□ -1.83
SIX3O95343 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.61□□□□□ -1.83
SIX3O95343 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.61□□□□□ -1.83
SIX3O95343 MFSD8-236ENST00000641509 4050 ntBASIC3.6□□□□□ -1.83
SIX3O95343 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
SIX3O95343 RNA5SP119-201ENST00000362715 117 ntBASIC3.6□□□□□ -1.83
SIX3O95343 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
SIX3O95343 MIR30B-201ENST00000384850 88 ntBASIC3.6□□□□□ -1.83
SIX3O95343 RNU6-1242P-201ENST00000391052 103 ntBASIC3.6□□□□□ -1.83
SIX3O95343 Z98941.1-201ENST00000407764 100 ntBASIC3.6□□□□□ -1.83
SIX3O95343 USP9YP33-201ENST00000412220 421 ntBASIC3.6□□□□□ -1.83
SIX3O95343 AL139247.1-201ENST00000422768 325 ntBASIC3.6□□□□□ -1.83
SIX3O95343 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC3.6□□□□□ -1.83
SIX3O95343 AC002075.2-201ENST00000425207 252 ntBASIC3.6□□□□□ -1.83
SIX3O95343 DUTP6-201ENST00000425573 462 ntBASIC3.6□□□□□ -1.83
SIX3O95343 AC236972.1-201ENST00000433225 199 ntBASIC3.6□□□□□ -1.83
SIX3O95343 USP9YP35-201ENST00000435696 412 ntBASIC3.6□□□□□ -1.83
SIX3O95343 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.6□□□□□ -1.83
SIX3O95343 AC234775.1-201ENST00000454247 670 ntBASIC3.6□□□□□ -1.83
SIX3O95343 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SIX3O95343 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.6□□□□□ -1.83
SIX3O95343 AC078785.3-201ENST00000476607 425 ntBASIC3.6□□□□□ -1.83
SIX3O95343 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.6□□□□□ -1.83
SIX3O95343 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC3.6□□□□□ -1.83
SIX3O95343 AP001804.3-201ENST00000525146 880 ntBASIC3.6□□□□□ -1.83
SIX3O95343 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.6□□□□□ -1.83
SIX3O95343 AC010198.2-201ENST00000550612 259 ntBASIC3.6□□□□□ -1.83
SIX3O95343 AC023161.2-201ENST00000551218 780 ntBASIC3.6□□□□□ -1.83
SIX3O95343 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SIX3O95343 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.6□□□□□ -1.83
SIX3O95343 DUXAP11-201ENST00000603858 526 ntBASIC3.6□□□□□ -1.83
SIX3O95343 AC245297.2-201ENST00000610119 565 ntBASIC3.6□□□□□ -1.83
SIX3O95343 AC106028.5-201ENST00000610332 395 ntBASIC3.6□□□□□ -1.83
SIX3O95343 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SIX3O95343 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.6□□□□□ -1.83
SIX3O95343 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SIX3O95343 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SIX3O95343 AC007656.2-201ENST00000624902 4547 ntBASIC3.6□□□□□ -1.83
SIX3O95343 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SIX3O95343 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.6□□□□□ -1.83
SIX3O95343 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SIX3O95343 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SIX3O95343 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
SIX3O95343 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SIX3O95343 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
SIX3O95343 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.59□□□□□ -1.83
SIX3O95343 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
SIX3O95343 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms