Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.12□□□□□ -1.75
RTN3O95197 AL590282.1-201ENST00000610379 1136 ntBASIC4.12□□□□□ -1.75
RTN3O95197 AC009464.1-201ENST00000615731 469 ntBASIC4.12□□□□□ -1.75
RTN3O95197 AL591424.2-201ENST00000617023 128 ntBASIC4.12□□□□□ -1.75
RTN3O95197 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.12□□□□□ -1.75
RTN3O95197 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.12□□□□□ -1.75
RTN3O95197 CRYM-AS1-204ENST00000637983 556 ntBASIC4.12□□□□□ -1.75
RTN3O95197 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RTN3O95197 AC011477.1-204ENST00000623416 1325 ntBASIC4.12□□□□□ -1.75
RTN3O95197 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RTN3O95197 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RTN3O95197 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.12□□□□□ -1.75
RTN3O95197 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RTN3O95197 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
RTN3O95197 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.11□□□□□ -1.75
RTN3O95197 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RTN3O95197 AC010733.2-201ENST00000589496 5702 ntBASIC4.11□□□□□ -1.75
RTN3O95197 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.11□□□□□ -1.75
RTN3O95197 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
RTN3O95197 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.11□□□□□ -1.75
RTN3O95197 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RTN3O95197 RNU6-462P-201ENST00000362659 105 ntBASIC4.11□□□□□ -1.75
RTN3O95197 MIR554-201ENST00000384874 96 ntBASIC4.11□□□□□ -1.75
RTN3O95197 AL356131.1-201ENST00000405826 414 ntBASIC4.11□□□□□ -1.75
RTN3O95197 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.11□□□□□ -1.75
RTN3O95197 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC4.11□□□□□ -1.75
RTN3O95197 AL389915.1-201ENST00000422463 466 ntBASIC4.11□□□□□ -1.75
RTN3O95197 AL035407.1-201ENST00000429211 571 ntBASIC4.11□□□□□ -1.75
RTN3O95197 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
RTN3O95197 MTND5P14-201ENST00000441481 1267 ntBASIC4.11□□□□□ -1.75
RTN3O95197 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.11□□□□□ -1.75
RTN3O95197 EEF1E1P1-201ENST00000446998 430 ntBASIC4.11□□□□□ -1.75
RTN3O95197 RPL7P52-201ENST00000449200 742 ntBASIC4.11□□□□□ -1.75
RTN3O95197 Z82190.1-201ENST00000454534 490 ntBASIC4.11□□□□□ -1.75
RTN3O95197 VN1R40P-201ENST00000455196 941 ntBASIC4.11□□□□□ -1.75
RTN3O95197 AC034236.1-201ENST00000469891 373 ntBASIC4.11□□□□□ -1.75
RTN3O95197 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC4.11□□□□□ -1.75
RTN3O95197 AC104685.1-201ENST00000502445 371 ntBASIC4.11□□□□□ -1.75
RTN3O95197 MTCYBP35-201ENST00000503630 1137 ntBASIC4.11□□□□□ -1.75
RTN3O95197 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.11□□□□□ -1.75
RTN3O95197 RNU6-1073P-201ENST00000517182 106 ntBASIC4.11□□□□□ -1.75
RTN3O95197 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.11□□□□□ -1.75
RTN3O95197 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC4.11□□□□□ -1.75
RTN3O95197 UBTFL10-201ENST00000528532 562 ntBASIC4.11□□□□□ -1.75
RTN3O95197 DUXAP6-201ENST00000553858 601 ntBASIC4.11□□□□□ -1.75
RTN3O95197 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
RTN3O95197 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC4.11□□□□□ -1.75
RTN3O95197 AC034105.4-201ENST00000568304 277 ntBASIC4.11□□□□□ -1.75
RTN3O95197 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.11□□□□□ -1.75
RTN3O95197 AC020914.6-201ENST00000594327 272 ntBASIC4.11□□□□□ -1.75
RTN3O95197 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.11□□□□□ -1.75
RTN3O95197 AC007687.1-201ENST00000602704 304 ntBASIC4.11□□□□□ -1.75
RTN3O95197 AC012669.1-201ENST00000603209 283 ntBASIC4.11□□□□□ -1.75
RTN3O95197 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.11□□□□□ -1.75
RTN3O95197 RNU6-88P-201ENST00000606801 100 ntBASIC4.11□□□□□ -1.75
RTN3O95197 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC4.11□□□□□ -1.75
RTN3O95197 FP236240.3-201ENST00000623061 327 ntBASIC4.11□□□□□ -1.75
RTN3O95197 AL356585.4-201ENST00000623078 1229 ntBASIC4.11□□□□□ -1.75
RTN3O95197 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.11□□□□□ -1.75
RTN3O95197 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RTN3O95197 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.11□□□□□ -1.75
RTN3O95197 AL161912.2-201ENST00000565707 3007 ntBASIC4.11□□□□□ -1.75
RTN3O95197 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.11□□□□□ -1.75
RTN3O95197 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RTN3O95197 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.11□□□□□ -1.75
RTN3O95197 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RTN3O95197 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.1□□□□□ -1.75
RTN3O95197 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
RTN3O95197 RNU6-600P-201ENST00000362524 99 ntBASIC4.1□□□□□ -1.75
RTN3O95197 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
RTN3O95197 U1.1-201ENST00000384101 164 ntBASIC4.1□□□□□ -1.75
RTN3O95197 RNU6ATAC-201ENST00000408749 126 ntBASIC4.1□□□□□ -1.75
RTN3O95197 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC4.1□□□□□ -1.75
RTN3O95197 AC007389.2-201ENST00000434630 306 ntBASIC4.1□□□□□ -1.75
RTN3O95197 RANP8-201ENST00000444720 713 ntBASIC4.1□□□□□ -1.75
RTN3O95197 AC002381.1-201ENST00000447049 280 ntBASIC4.1□□□□□ -1.75
RTN3O95197 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC4.1□□□□□ -1.75
RTN3O95197 AL139824.2-201ENST00000458731 1095 ntBASIC4.1□□□□□ -1.75
RTN3O95197 RN7SL93P-201ENST00000463035 293 ntBASIC4.1□□□□□ -1.75
RTN3O95197 RN7SL330P-201ENST00000469709 307 ntBASIC4.1□□□□□ -1.75
RTN3O95197 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.1□□□□□ -1.75
RTN3O95197 RPL23AP55-201ENST00000498163 452 ntBASIC4.1□□□□□ -1.75
RTN3O95197 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC4.1□□□□□ -1.75
RTN3O95197 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.1□□□□□ -1.75
RTN3O95197 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC4.1□□□□□ -1.75
RTN3O95197 RNU6-1095P-201ENST00000516148 108 ntBASIC4.1□□□□□ -1.75
RTN3O95197 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RTN3O95197 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RTN3O95197 AC087481.2-201ENST00000565492 330 ntBASIC4.1□□□□□ -1.75
RTN3O95197 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.1□□□□□ -1.75
RTN3O95197 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RTN3O95197 AC004853.1-201ENST00000604902 698 ntBASIC4.1□□□□□ -1.75
RTN3O95197 Z99289.3-201ENST00000605586 594 ntBASIC4.1□□□□□ -1.75
RTN3O95197 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.1□□□□□ -1.75
RTN3O95197 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RTN3O95197 AL607023.1-201ENST00000620045 248 ntBASIC4.1□□□□□ -1.75
RTN3O95197 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RTN3O95197 BDP1P-201ENST00000582658 1990 ntBASIC4.1□□□□□ -1.75
RTN3O95197 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC4.1□□□□□ -1.75
RTN3O95197 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms