Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 RNA5SP447-201ENST00000363749 119 ntBASIC6.23□□□□□ -1.41
PTCD1O75127 SNORA4.3-201ENST00000365564 137 ntBASIC6.23□□□□□ -1.41
PTCD1O75127 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PTCD1O75127 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC6.23□□□□□ -1.41
PTCD1O75127 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.23□□□□□ -1.41
PTCD1O75127 RNU6-606P-201ENST00000384721 111 ntBASIC6.23□□□□□ -1.41
PTCD1O75127 MIR568-201ENST00000385036 95 ntBASIC6.23□□□□□ -1.41
PTCD1O75127 MIR559-201ENST00000385188 96 ntBASIC6.23□□□□□ -1.41
PTCD1O75127 RNU2-47P-201ENST00000410649 186 ntBASIC6.23□□□□□ -1.41
PTCD1O75127 AC127526.1-201ENST00000417526 366 ntBASIC6.23□□□□□ -1.41
PTCD1O75127 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC6.23□□□□□ -1.41
PTCD1O75127 OR4K11P-201ENST00000431829 904 ntBASIC6.23□□□□□ -1.41
PTCD1O75127 RPS20P5-201ENST00000434808 360 ntBASIC6.23□□□□□ -1.41
PTCD1O75127 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PTCD1O75127 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC6.23□□□□□ -1.41
PTCD1O75127 AC130509.1-201ENST00000464158 433 ntBASIC6.23□□□□□ -1.41
PTCD1O75127 FTH1P24-201ENST00000503502 462 ntBASIC6.23□□□□□ -1.41
PTCD1O75127 HSPD1P15-201ENST00000505573 1122 ntBASIC6.23□□□□□ -1.41
PTCD1O75127 AC091868.1-201ENST00000508746 304 ntBASIC6.23□□□□□ -1.41
PTCD1O75127 AC017037.2-201ENST00000513850 890 ntBASIC6.23□□□□□ -1.41
PTCD1O75127 RAD21-204ENST00000518055 896 ntTSL 2 BASIC6.23□□□□□ -1.41
PTCD1O75127 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC6.23□□□□□ -1.41
PTCD1O75127 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC6.23□□□□□ -1.41
PTCD1O75127 OR4P1P-201ENST00000530808 1136 ntBASIC6.23□□□□□ -1.41
PTCD1O75127 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC6.23□□□□□ -1.41
PTCD1O75127 BNIP3P6-201ENST00000549284 499 ntBASIC6.23□□□□□ -1.41
PTCD1O75127 AL110118.1-201ENST00000553543 400 ntBASIC6.23□□□□□ -1.41
PTCD1O75127 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC6.23□□□□□ -1.41
PTCD1O75127 OR4K8P-201ENST00000578842 1048 ntBASIC6.23□□□□□ -1.41
PTCD1O75127 AC100830.2-201ENST00000581636 240 ntBASIC6.23□□□□□ -1.41
PTCD1O75127 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
PTCD1O75127 GLUD1P4-201ENST00000590914 418 ntBASIC6.23□□□□□ -1.41
PTCD1O75127 SNRPGP17-201ENST00000603780 214 ntBASIC6.23□□□□□ -1.41
PTCD1O75127 AC010591.1-201ENST00000603941 649 ntBASIC6.23□□□□□ -1.41
PTCD1O75127 uc_338.12-201ENST00000616344 181 ntBASIC6.23□□□□□ -1.41
PTCD1O75127 AL596245.1-201ENST00000618994 362 ntBASIC6.23□□□□□ -1.41
PTCD1O75127 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PTCD1O75127 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC6.23□□□□□ -1.41
PTCD1O75127 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
PTCD1O75127 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PTCD1O75127 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PTCD1O75127 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC6.23□□□□□ -1.41
PTCD1O75127 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC6.22□□□□□ -1.41
PTCD1O75127 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC6.22□□□□□ -1.41
PTCD1O75127 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
PTCD1O75127 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC6.22□□□□□ -1.41
PTCD1O75127 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC6.22□□□□□ -1.41
PTCD1O75127 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PTCD1O75127 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PTCD1O75127 MIR369-201ENST00000362155 70 ntBASIC6.22□□□□□ -1.41
PTCD1O75127 RNU4-48P-201ENST00000365559 182 ntBASIC6.22□□□□□ -1.41
PTCD1O75127 RNU6-196P-201ENST00000384315 107 ntBASIC6.22□□□□□ -1.41
PTCD1O75127 MIR129-1-201ENST00000384972 72 ntBASIC6.22□□□□□ -1.41
PTCD1O75127 AC113618.1-201ENST00000416747 285 ntBASIC6.22□□□□□ -1.41
PTCD1O75127 AL645608.4-201ENST00000423619 154 ntBASIC6.22□□□□□ -1.41
PTCD1O75127 AL358176.2-201ENST00000425769 204 ntBASIC6.22□□□□□ -1.41
PTCD1O75127 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC6.22□□□□□ -1.41
PTCD1O75127 AC236972.2-201ENST00000434979 310 ntBASIC6.22□□□□□ -1.41
PTCD1O75127 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC6.22□□□□□ -1.41
PTCD1O75127 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC6.22□□□□□ -1.41
PTCD1O75127 AC006480.1-201ENST00000449887 378 ntBASIC6.22□□□□□ -1.41
PTCD1O75127 SUMO1P2-201ENST00000452524 304 ntBASIC6.22□□□□□ -1.41
PTCD1O75127 NANOGP10-201ENST00000453325 895 ntBASIC6.22□□□□□ -1.41
PTCD1O75127 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC6.22□□□□□ -1.41
PTCD1O75127 RNU6-1208P-201ENST00000459588 107 ntBASIC6.22□□□□□ -1.41
PTCD1O75127 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC6.22□□□□□ -1.41
PTCD1O75127 AL049714.1-201ENST00000466686 347 ntBASIC6.22□□□□□ -1.41
PTCD1O75127 AC083829.1-201ENST00000503756 657 ntBASIC6.22□□□□□ -1.41
PTCD1O75127 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC6.22□□□□□ -1.41
PTCD1O75127 AC068831.4-201ENST00000556118 109 ntBASIC6.22□□□□□ -1.41
PTCD1O75127 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC6.22□□□□□ -1.41
PTCD1O75127 RPL21P12-201ENST00000559810 515 ntBASIC6.22□□□□□ -1.41
PTCD1O75127 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC6.22□□□□□ -1.41
PTCD1O75127 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC6.22□□□□□ -1.41
PTCD1O75127 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC6.22□□□□□ -1.41
PTCD1O75127 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC6.22□□□□□ -1.41
PTCD1O75127 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC6.22□□□□□ -1.41
PTCD1O75127 AC008638.3-201ENST00000603341 463 ntBASIC6.22□□□□□ -1.41
PTCD1O75127 AC123786.2-201ENST00000603459 275 ntBASIC6.22□□□□□ -1.41
PTCD1O75127 SSX9-202ENST00000608568 580 ntTSL 4 BASIC6.22□□□□□ -1.41
PTCD1O75127 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC6.22□□□□□ -1.41
PTCD1O75127 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PTCD1O75127 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC6.22□□□□□ -1.41
PTCD1O75127 AC119674.1-207ENST00000641355 633 ntBASIC6.22□□□□□ -1.41
PTCD1O75127 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PTCD1O75127 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC6.22□□□□□ -1.41
PTCD1O75127 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PTCD1O75127 UQCRC2P1-201ENST00000417777 1332 ntBASIC6.22□□□□□ -1.41
PTCD1O75127 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
PTCD1O75127 LYST-202ENST00000389794 12985 ntTSL 5 BASIC6.21□□□□□ -1.41
PTCD1O75127 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
PTCD1O75127 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.21□□□□□ -1.42
PTCD1O75127 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
PTCD1O75127 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
PTCD1O75127 SNORA73.1-201ENST00000363107 205 ntBASIC6.21□□□□□ -1.42
PTCD1O75127 RNU6-1309P-201ENST00000363305 108 ntBASIC6.21□□□□□ -1.42
PTCD1O75127 RNA5SP479-201ENST00000364858 117 ntBASIC6.21□□□□□ -1.42
PTCD1O75127 Y_RNA.367-201ENST00000365544 101 ntBASIC6.21□□□□□ -1.42
PTCD1O75127 RNU6-39P-201ENST00000384344 107 ntBASIC6.21□□□□□ -1.42
PTCD1O75127 Y_RNA.579-201ENST00000390939 94 ntBASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms