Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 CKAP2P1-201ENST00000555477 2049 ntBASIC1.9□□□□□ -2.11
SSSCA1O60232 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC1.9□□□□□ -2.11
SSSCA1O60232 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
SSSCA1O60232 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
SSSCA1O60232 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
SSSCA1O60232 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
SSSCA1O60232 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
SSSCA1O60232 MIR27B-201ENST00000385129 97 ntBASIC1.9□□□□□ -2.11
SSSCA1O60232 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC1.9□□□□□ -2.11
SSSCA1O60232 USP9YP27-201ENST00000418455 438 ntBASIC1.9□□□□□ -2.11
SSSCA1O60232 AJ239321.1-201ENST00000424255 564 ntBASIC1.9□□□□□ -2.11
SSSCA1O60232 WARS2P1-201ENST00000429678 537 ntBASIC1.9□□□□□ -2.11
SSSCA1O60232 FCF1P1-201ENST00000432690 571 ntBASIC1.9□□□□□ -2.11
SSSCA1O60232 AC105272.1-201ENST00000438604 198 ntBASIC1.9□□□□□ -2.11
SSSCA1O60232 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC1.9□□□□□ -2.11
SSSCA1O60232 ELOCP13-201ENST00000443934 329 ntBASIC1.9□□□□□ -2.11
SSSCA1O60232 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC1.9□□□□□ -2.11
SSSCA1O60232 AP002345.1-201ENST00000456493 928 ntBASIC1.9□□□□□ -2.11
SSSCA1O60232 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC1.9□□□□□ -2.11
SSSCA1O60232 GTF2IP9-201ENST00000502460 301 ntBASIC1.9□□□□□ -2.11
SSSCA1O60232 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC1.9□□□□□ -2.11
SSSCA1O60232 HIGD1AP18-201ENST00000520730 278 ntBASIC1.9□□□□□ -2.11
SSSCA1O60232 AP004371.1-201ENST00000525240 214 ntBASIC1.9□□□□□ -2.11
SSSCA1O60232 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC1.9□□□□□ -2.11
SSSCA1O60232 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
SSSCA1O60232 NOP56P3-201ENST00000549457 385 ntBASIC1.9□□□□□ -2.11
SSSCA1O60232 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC1.9□□□□□ -2.11
SSSCA1O60232 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC1.9□□□□□ -2.11
SSSCA1O60232 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC1.9□□□□□ -2.11
SSSCA1O60232 AC105137.2-201ENST00000569073 466 ntBASIC1.9□□□□□ -2.11
SSSCA1O60232 MIR5694-201ENST00000581190 76 ntBASIC1.9□□□□□ -2.11
SSSCA1O60232 AC010620.2-201ENST00000600135 313 ntBASIC1.9□□□□□ -2.11
SSSCA1O60232 AC009220.3-201ENST00000604318 586 ntBASIC1.9□□□□□ -2.11
SSSCA1O60232 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC1.9□□□□□ -2.11
SSSCA1O60232 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC1.9□□□□□ -2.11
SSSCA1O60232 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC1.9□□□□□ -2.11
SSSCA1O60232 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC1.9□□□□□ -2.11
SSSCA1O60232 MIR8057-201ENST00000620957 69 ntBASIC1.9□□□□□ -2.11
SSSCA1O60232 AL160394.1-201ENST00000624765 724 ntBASIC1.9□□□□□ -2.11
SSSCA1O60232 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC1.9□□□□□ -2.11
SSSCA1O60232 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
SSSCA1O60232 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC1.9□□□□□ -2.11
SSSCA1O60232 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
SSSCA1O60232 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
SSSCA1O60232 OFD1P5Y-201ENST00000447585 2590 ntBASIC1.89□□□□□ -2.11
SSSCA1O60232 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
SSSCA1O60232 AC097714.1-201ENST00000511272 1647 ntBASIC1.89□□□□□ -2.11
SSSCA1O60232 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
SSSCA1O60232 OR5H15-201ENST00000383696 930 ntBASIC1.89□□□□□ -2.11
SSSCA1O60232 RNU6-629P-201ENST00000384061 103 ntBASIC1.89□□□□□ -2.11
SSSCA1O60232 SNORA44-201ENST00000384584 132 ntBASIC1.89□□□□□ -2.11
SSSCA1O60232 MIR627-201ENST00000384979 97 ntBASIC1.89□□□□□ -2.11
SSSCA1O60232 RPS15AP40-201ENST00000419621 391 ntBASIC1.89□□□□□ -2.11
SSSCA1O60232 ARL5AP4-201ENST00000430731 512 ntBASIC1.89□□□□□ -2.11
SSSCA1O60232 RPS7P2-201ENST00000435134 607 ntBASIC1.89□□□□□ -2.11
SSSCA1O60232 CDC27P1-201ENST00000445384 715 ntBASIC1.89□□□□□ -2.11
SSSCA1O60232 RPL6P5-201ENST00000445678 828 ntBASIC1.89□□□□□ -2.11
SSSCA1O60232 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC1.89□□□□□ -2.11
SSSCA1O60232 BX276092.4-201ENST00000452056 248 ntBASIC1.89□□□□□ -2.11
SSSCA1O60232 AL031183.1-201ENST00000457667 207 ntBASIC1.89□□□□□ -2.11
SSSCA1O60232 FTH1P2-201ENST00000466086 412 ntBASIC1.89□□□□□ -2.11
SSSCA1O60232 RPL36AP51-201ENST00000487216 318 ntBASIC1.89□□□□□ -2.11
SSSCA1O60232 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
SSSCA1O60232 SRI-210ENST00000490437 570 ntTSL 2 BASIC1.89□□□□□ -2.11
SSSCA1O60232 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC1.89□□□□□ -2.11
SSSCA1O60232 HMGB1P22-201ENST00000505315 124 ntBASIC1.89□□□□□ -2.11
SSSCA1O60232 AC034159.1-201ENST00000513885 583 ntBASIC1.89□□□□□ -2.11
SSSCA1O60232 HIGD1AP3-201ENST00000515857 278 ntBASIC1.89□□□□□ -2.11
SSSCA1O60232 RNA5SP320-201ENST00000516263 124 ntBASIC1.89□□□□□ -2.11
SSSCA1O60232 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC1.89□□□□□ -2.11
SSSCA1O60232 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC1.89□□□□□ -2.11
SSSCA1O60232 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC1.89□□□□□ -2.11
SSSCA1O60232 AC008083.2-201ENST00000546707 476 ntBASIC1.89□□□□□ -2.11
SSSCA1O60232 AC007115.1-201ENST00000546853 234 ntBASIC1.89□□□□□ -2.11
SSSCA1O60232 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC1.89□□□□□ -2.11
SSSCA1O60232 PCNAP1-202ENST00000595299 752 ntBASIC1.89□□□□□ -2.11
SSSCA1O60232 AL137843.1-201ENST00000605078 385 ntBASIC1.89□□□□□ -2.11
SSSCA1O60232 AC245389.1-201ENST00000605141 529 ntBASIC1.89□□□□□ -2.11
SSSCA1O60232 AC093732.2-201ENST00000607950 274 ntBASIC1.89□□□□□ -2.11
SSSCA1O60232 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC1.89□□□□□ -2.11
SSSCA1O60232 AC135776.4-201ENST00000624300 1904 ntBASIC1.89□□□□□ -2.11
SSSCA1O60232 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC1.89□□□□□ -2.11
SSSCA1O60232 AL049780.3-201ENST00000624612 1583 ntBASIC1.89□□□□□ -2.11
SSSCA1O60232 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC1.88□□□□□ -2.11
SSSCA1O60232 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
SSSCA1O60232 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
SSSCA1O60232 SNORA71.3-201ENST00000362582 128 ntBASIC1.88□□□□□ -2.11
SSSCA1O60232 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
SSSCA1O60232 HNRNPDP2-201ENST00000406475 478 ntBASIC1.88□□□□□ -2.11
SSSCA1O60232 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC1.88□□□□□ -2.11
SSSCA1O60232 MTATP6P11-201ENST00000428071 670 ntBASIC1.88□□□□□ -2.11
SSSCA1O60232 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC1.88□□□□□ -2.11
SSSCA1O60232 AL031659.1-201ENST00000447075 539 ntBASIC1.88□□□□□ -2.11
SSSCA1O60232 AP000936.2-201ENST00000447151 681 ntBASIC1.88□□□□□ -2.11
SSSCA1O60232 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC1.88□□□□□ -2.11
SSSCA1O60232 AL035407.2-201ENST00000454090 378 ntBASIC1.88□□□□□ -2.11
SSSCA1O60232 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC1.88□□□□□ -2.11
SSSCA1O60232 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC1.88□□□□□ -2.11
SSSCA1O60232 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC1.88□□□□□ -2.11
SSSCA1O60232 RAC1P5-201ENST00000512182 576 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms