Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 OR4K11P-201ENST00000431829 904 ntBASIC4.37□□□□□ -1.71
PHGDHO43175 FTH1P1-201ENST00000437933 532 ntBASIC4.37□□□□□ -1.71
PHGDHO43175 AC006466.1-201ENST00000438721 289 ntBASIC4.37□□□□□ -1.71
PHGDHO43175 RPS17P13-201ENST00000448974 407 ntBASIC4.37□□□□□ -1.71
PHGDHO43175 AC010655.1-201ENST00000449336 292 ntBASIC4.37□□□□□ -1.71
PHGDHO43175 AC234775.1-201ENST00000454247 670 ntBASIC4.37□□□□□ -1.71
PHGDHO43175 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC4.37□□□□□ -1.71
PHGDHO43175 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.37□□□□□ -1.71
PHGDHO43175 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.37□□□□□ -1.71
PHGDHO43175 AC010460.1-201ENST00000507087 466 ntBASIC4.37□□□□□ -1.71
PHGDHO43175 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.37□□□□□ -1.71
PHGDHO43175 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PHGDHO43175 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.37□□□□□ -1.71
PHGDHO43175 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.37□□□□□ -1.71
PHGDHO43175 MIR3118-1-201ENST00000581787 76 ntBASIC4.37□□□□□ -1.71
PHGDHO43175 AC090616.5-202ENST00000582111 297 ntBASIC4.37□□□□□ -1.71
PHGDHO43175 AC006254.3-201ENST00000603353 884 ntBASIC4.37□□□□□ -1.71
PHGDHO43175 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.37□□□□□ -1.71
PHGDHO43175 AC090948.1-201ENST00000607464 549 ntBASIC4.37□□□□□ -1.71
PHGDHO43175 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PHGDHO43175 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.37□□□□□ -1.71
PHGDHO43175 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.37□□□□□ -1.71
PHGDHO43175 AC138649.3-201ENST00000622154 254 ntBASIC4.37□□□□□ -1.71
PHGDHO43175 AL732618.1-201ENST00000623251 301 ntBASIC4.37□□□□□ -1.71
PHGDHO43175 AC091953.2-201ENST00000623979 160 ntBASIC4.37□□□□□ -1.71
PHGDHO43175 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.37□□□□□ -1.71
PHGDHO43175 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PHGDHO43175 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
PHGDHO43175 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
PHGDHO43175 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.37□□□□□ -1.71
PHGDHO43175 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
PHGDHO43175 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PHGDHO43175 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PHGDHO43175 AC006971.1-201ENST00000407916 4486 ntBASIC4.36□□□□□ -1.71
PHGDHO43175 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PHGDHO43175 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
PHGDHO43175 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.36□□□□□ -1.71
PHGDHO43175 RN7SKP226-201ENST00000364912 300 ntBASIC4.36□□□□□ -1.71
PHGDHO43175 Y_RNA.296-201ENST00000364930 108 ntBASIC4.36□□□□□ -1.71
PHGDHO43175 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
PHGDHO43175 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
PHGDHO43175 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.36□□□□□ -1.71
PHGDHO43175 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC4.36□□□□□ -1.71
PHGDHO43175 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC4.36□□□□□ -1.71
PHGDHO43175 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.36□□□□□ -1.71
PHGDHO43175 AC092832.1-201ENST00000422934 400 ntBASIC4.36□□□□□ -1.71
PHGDHO43175 AL360081.1-201ENST00000428299 555 ntBASIC4.36□□□□□ -1.71
PHGDHO43175 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC4.36□□□□□ -1.71
PHGDHO43175 CBX1P1-201ENST00000440184 427 ntBASIC4.36□□□□□ -1.71
PHGDHO43175 MTND1P1-201ENST00000445453 368 ntBASIC4.36□□□□□ -1.71
PHGDHO43175 MTCO3P20-201ENST00000454926 688 ntBASIC4.36□□□□□ -1.71
PHGDHO43175 AC010326.1-201ENST00000462726 602 ntBASIC4.36□□□□□ -1.71
PHGDHO43175 NIP7P2-201ENST00000485801 544 ntBASIC4.36□□□□□ -1.71
PHGDHO43175 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC4.36□□□□□ -1.71
PHGDHO43175 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
PHGDHO43175 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.36□□□□□ -1.71
PHGDHO43175 AC015795.1-201ENST00000513669 327 ntBASIC4.36□□□□□ -1.71
PHGDHO43175 RNU6-1095P-201ENST00000516148 108 ntBASIC4.36□□□□□ -1.71
PHGDHO43175 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.36□□□□□ -1.71
PHGDHO43175 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC4.36□□□□□ -1.71
PHGDHO43175 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.36□□□□□ -1.71
PHGDHO43175 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.36□□□□□ -1.71
PHGDHO43175 AL391840.1-201ENST00000571144 367 ntBASIC4.36□□□□□ -1.71
PHGDHO43175 AC099489.2-201ENST00000574976 260 ntBASIC4.36□□□□□ -1.71
PHGDHO43175 OR4K8P-201ENST00000578842 1048 ntBASIC4.36□□□□□ -1.71
PHGDHO43175 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.36□□□□□ -1.71
PHGDHO43175 AL158211.4-201ENST00000606988 584 ntBASIC4.36□□□□□ -1.71
PHGDHO43175 AC090970.3-201ENST00000612566 866 ntBASIC4.36□□□□□ -1.71
PHGDHO43175 AC026368.1-201ENST00000614934 690 ntBASIC4.36□□□□□ -1.71
PHGDHO43175 LINC00901.1-201ENST00000617252 152 ntBASIC4.36□□□□□ -1.71
PHGDHO43175 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.36□□□□□ -1.71
PHGDHO43175 AC091953.3-201ENST00000623220 236 ntBASIC4.36□□□□□ -1.71
PHGDHO43175 AC068880.5-201ENST00000624331 290 ntBASIC4.36□□□□□ -1.71
PHGDHO43175 AC068137.3-201ENST00000639191 341 ntBASIC4.36□□□□□ -1.71
PHGDHO43175 AC073869.6-201ENST00000640656 341 ntBASIC4.36□□□□□ -1.71
PHGDHO43175 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
PHGDHO43175 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PHGDHO43175 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PHGDHO43175 AC090337.1-201ENST00000579651 2074 ntBASIC4.36□□□□□ -1.71
PHGDHO43175 AC025031.4-201ENST00000621248 3271 ntBASIC4.36□□□□□ -1.71
PHGDHO43175 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
PHGDHO43175 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PHGDHO43175 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
PHGDHO43175 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
PHGDHO43175 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.35□□□□□ -1.71
PHGDHO43175 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PHGDHO43175 RN7SKP103-201ENST00000363848 320 ntBASIC4.35□□□□□ -1.71
PHGDHO43175 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
PHGDHO43175 RPL23AP32-201ENST00000395315 459 ntBASIC4.35□□□□□ -1.71
PHGDHO43175 RNA5SP104-201ENST00000410989 118 ntBASIC4.35□□□□□ -1.71
PHGDHO43175 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC4.35□□□□□ -1.71
PHGDHO43175 AC127391.1-201ENST00000411737 98 ntBASIC4.35□□□□□ -1.71
PHGDHO43175 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.35□□□□□ -1.71
PHGDHO43175 OR1AA1P-201ENST00000419597 916 ntBASIC4.35□□□□□ -1.71
PHGDHO43175 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.35□□□□□ -1.71
PHGDHO43175 RPL7AP25-201ENST00000423357 805 ntBASIC4.35□□□□□ -1.71
PHGDHO43175 AC019097.1-201ENST00000424783 735 ntBASIC4.35□□□□□ -1.71
PHGDHO43175 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.35□□□□□ -1.71
PHGDHO43175 AL358934.1-201ENST00000432346 324 ntBASIC4.35□□□□□ -1.71
PHGDHO43175 AC119618.1-201ENST00000434191 222 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms