Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC1.38□□□□□ -2.19
CHKB-CPT1BH3BT56 RPS27P26-201ENST00000494583 239 ntBASIC1.38□□□□□ -2.19
CHKB-CPT1BH3BT56 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC1.38□□□□□ -2.19
CHKB-CPT1BH3BT56 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC1.38□□□□□ -2.19
CHKB-CPT1BH3BT56 TTC39CP1-201ENST00000512513 755 ntBASIC1.38□□□□□ -2.19
CHKB-CPT1BH3BT56 AC034159.1-201ENST00000513885 583 ntBASIC1.38□□□□□ -2.19
CHKB-CPT1BH3BT56 IGKV2D-36-201ENST00000518643 226 ntBASIC1.38□□□□□ -2.19
CHKB-CPT1BH3BT56 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC1.38□□□□□ -2.19
CHKB-CPT1BH3BT56 AC118942.1-201ENST00000529674 1035 ntBASIC1.38□□□□□ -2.19
CHKB-CPT1BH3BT56 AP002812.4-201ENST00000532139 286 ntBASIC1.38□□□□□ -2.19
CHKB-CPT1BH3BT56 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC1.38□□□□□ -2.19
CHKB-CPT1BH3BT56 GLYCAM1-201ENST00000546596 285 ntBASIC1.38□□□□□ -2.19
CHKB-CPT1BH3BT56 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
CHKB-CPT1BH3BT56 AL121603.1-201ENST00000553815 142 ntBASIC1.38□□□□□ -2.19
CHKB-CPT1BH3BT56 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC1.38□□□□□ -2.19
CHKB-CPT1BH3BT56 AL121594.4-201ENST00000556211 1196 ntBASIC1.38□□□□□ -2.19
CHKB-CPT1BH3BT56 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC1.38□□□□□ -2.19
CHKB-CPT1BH3BT56 AC044860.2-201ENST00000561005 179 ntBASIC1.38□□□□□ -2.19
CHKB-CPT1BH3BT56 AP005205.1-201ENST00000563503 508 ntBASIC1.38□□□□□ -2.19
CHKB-CPT1BH3BT56 AC023824.2-201ENST00000566185 400 ntBASIC1.38□□□□□ -2.19
CHKB-CPT1BH3BT56 MIR3939-201ENST00000582614 106 ntBASIC1.38□□□□□ -2.19
CHKB-CPT1BH3BT56 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC1.38□□□□□ -2.19
CHKB-CPT1BH3BT56 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC1.38□□□□□ -2.19
CHKB-CPT1BH3BT56 AC025016.1-201ENST00000616746 682 ntBASIC1.38□□□□□ -2.19
CHKB-CPT1BH3BT56 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC1.38□□□□□ -2.19
CHKB-CPT1BH3BT56 AC097372.4-201ENST00000625025 466 ntBASIC1.38□□□□□ -2.19
CHKB-CPT1BH3BT56 WARS-244ENST00000627608 123 ntTSL 5 BASIC1.38□□□□□ -2.19
CHKB-CPT1BH3BT56 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
CHKB-CPT1BH3BT56 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.38□□□□□ -2.19
CHKB-CPT1BH3BT56 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
CHKB-CPT1BH3BT56 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.38□□□□□ -2.19
CHKB-CPT1BH3BT56 ZNF90P1-201ENST00000480493 1951 ntBASIC1.38□□□□□ -2.19
CHKB-CPT1BH3BT56 CR848007.1-201ENST00000442354 1699 ntBASIC1.37□□□□□ -2.19
CHKB-CPT1BH3BT56 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
CHKB-CPT1BH3BT56 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
CHKB-CPT1BH3BT56 OR56A5-201ENST00000340110 738 ntBASIC1.37□□□□□ -2.19
CHKB-CPT1BH3BT56 RNU1-51P-201ENST00000365345 176 ntBASIC1.37□□□□□ -2.19
CHKB-CPT1BH3BT56 ESD-201ENST00000378697 1079 ntTSL 5 BASIC1.37□□□□□ -2.19
CHKB-CPT1BH3BT56 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
CHKB-CPT1BH3BT56 GLS-203ENST00000409215 632 ntTSL 4 BASIC1.37□□□□□ -2.19
CHKB-CPT1BH3BT56 RN7SKP27-201ENST00000410684 333 ntBASIC1.37□□□□□ -2.19
CHKB-CPT1BH3BT56 AC073264.1-201ENST00000411508 416 ntBASIC1.37□□□□□ -2.19
CHKB-CPT1BH3BT56 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC1.37□□□□□ -2.19
CHKB-CPT1BH3BT56 AC063979.1-201ENST00000415539 377 ntBASIC1.37□□□□□ -2.19
CHKB-CPT1BH3BT56 HSFY4P-201ENST00000415994 1181 ntBASIC1.37□□□□□ -2.19
CHKB-CPT1BH3BT56 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC1.37□□□□□ -2.19
CHKB-CPT1BH3BT56 HSFY1P1-201ENST00000423928 1178 ntBASIC1.37□□□□□ -2.19
CHKB-CPT1BH3BT56 GAS5-208ENST00000425771 242 ntTSL 3 BASIC1.37□□□□□ -2.19
CHKB-CPT1BH3BT56 AL365496.1-201ENST00000426885 215 ntBASIC1.37□□□□□ -2.19
CHKB-CPT1BH3BT56 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC1.37□□□□□ -2.19
CHKB-CPT1BH3BT56 AL590762.3-201ENST00000436372 640 ntBASIC1.37□□□□□ -2.19
CHKB-CPT1BH3BT56 AC006028.1-201ENST00000438379 402 ntBASIC1.37□□□□□ -2.19
CHKB-CPT1BH3BT56 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.37□□□□□ -2.19
CHKB-CPT1BH3BT56 RPL26P28-201ENST00000451325 435 ntBASIC1.37□□□□□ -2.19
CHKB-CPT1BH3BT56 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC1.37□□□□□ -2.19
CHKB-CPT1BH3BT56 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC1.37□□□□□ -2.19
CHKB-CPT1BH3BT56 AC126121.1-201ENST00000482313 553 ntBASIC1.37□□□□□ -2.19
CHKB-CPT1BH3BT56 AC073522.1-201ENST00000483312 377 ntBASIC1.37□□□□□ -2.19
CHKB-CPT1BH3BT56 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC1.37□□□□□ -2.19
CHKB-CPT1BH3BT56 AC111000.5-201ENST00000506559 1178 ntBASIC1.37□□□□□ -2.19
CHKB-CPT1BH3BT56 AC117522.3-201ENST00000507974 584 ntBASIC1.37□□□□□ -2.19
CHKB-CPT1BH3BT56 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC1.37□□□□□ -2.19
CHKB-CPT1BH3BT56 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC1.37□□□□□ -2.19
CHKB-CPT1BH3BT56 MIR2116-201ENST00000517221 80 ntBASIC1.37□□□□□ -2.19
CHKB-CPT1BH3BT56 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC1.37□□□□□ -2.19
CHKB-CPT1BH3BT56 OR5B10P-201ENST00000532869 642 ntBASIC1.37□□□□□ -2.19
CHKB-CPT1BH3BT56 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC1.37□□□□□ -2.19
CHKB-CPT1BH3BT56 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC1.37□□□□□ -2.19
CHKB-CPT1BH3BT56 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC1.37□□□□□ -2.19
CHKB-CPT1BH3BT56 MIR5186-201ENST00000577504 120 ntBASIC1.37□□□□□ -2.19
CHKB-CPT1BH3BT56 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC1.37□□□□□ -2.19
CHKB-CPT1BH3BT56 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC1.37□□□□□ -2.19
CHKB-CPT1BH3BT56 VN1R85P-201ENST00000601587 426 ntBASIC1.37□□□□□ -2.19
CHKB-CPT1BH3BT56 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC1.37□□□□□ -2.19
CHKB-CPT1BH3BT56 AC005332.10-201ENST00000612725 619 ntBASIC1.37□□□□□ -2.19
CHKB-CPT1BH3BT56 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC1.37□□□□□ -2.19
CHKB-CPT1BH3BT56 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
CHKB-CPT1BH3BT56 AP000553.5-201ENST00000641933 54 ntBASIC1.37□□□□□ -2.19
CHKB-CPT1BH3BT56 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC1.37□□□□□ -2.19
CHKB-CPT1BH3BT56 AC087359.1-201ENST00000508335 1740 ntBASIC1.37□□□□□ -2.19
CHKB-CPT1BH3BT56 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC1.37□□□□□ -2.19
CHKB-CPT1BH3BT56 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC1.37□□□□□ -2.19
CHKB-CPT1BH3BT56 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC1.37□□□□□ -2.19
CHKB-CPT1BH3BT56 MTCO1P11-201ENST00000429111 1528 ntBASIC1.36□□□□□ -2.19
CHKB-CPT1BH3BT56 NSRP1P1-201ENST00000444067 1693 ntBASIC1.36□□□□□ -2.19
CHKB-CPT1BH3BT56 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
CHKB-CPT1BH3BT56 HSPE1P11-201ENST00000339579 310 ntBASIC1.36□□□□□ -2.19
CHKB-CPT1BH3BT56 RNA5SP50-201ENST00000363731 107 ntBASIC1.36□□□□□ -2.19
CHKB-CPT1BH3BT56 RNU6-1243P-201ENST00000364028 107 ntBASIC1.36□□□□□ -2.19
CHKB-CPT1BH3BT56 MIR550A3-201ENST00000390735 95 ntBASIC1.36□□□□□ -2.19
CHKB-CPT1BH3BT56 RPLP0P7-201ENST00000416050 667 ntBASIC1.36□□□□□ -2.19
CHKB-CPT1BH3BT56 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC1.36□□□□□ -2.19
CHKB-CPT1BH3BT56 ZNF90P2-204ENST00000419323 1075 ntBASIC1.36□□□□□ -2.19
CHKB-CPT1BH3BT56 TEX41-203ENST00000420472 765 ntTSL 3 BASIC1.36□□□□□ -2.19
CHKB-CPT1BH3BT56 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC1.36□□□□□ -2.19
CHKB-CPT1BH3BT56 MTCO2P17-201ENST00000424336 677 ntBASIC1.36□□□□□ -2.19
CHKB-CPT1BH3BT56 C4BPAP2-201ENST00000428434 478 ntBASIC1.36□□□□□ -2.19
CHKB-CPT1BH3BT56 AC098826.1-201ENST00000433943 471 ntBASIC1.36□□□□□ -2.19
CHKB-CPT1BH3BT56 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC1.36□□□□□ -2.19
CHKB-CPT1BH3BT56 AC092641.1-201ENST00000440229 772 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms