Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3□□□□□ -1.93
TMX2-CTNND1H3BSU7 MIR4506-201ENST00000584693 77 ntBASIC3□□□□□ -1.93
TMX2-CTNND1H3BSU7 ELOCP29-201ENST00000588193 334 ntBASIC3□□□□□ -1.93
TMX2-CTNND1H3BSU7 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3□□□□□ -1.93
TMX2-CTNND1H3BSU7 AP002906.1-201ENST00000603405 233 ntBASIC3□□□□□ -1.93
TMX2-CTNND1H3BSU7 LLPHP1-201ENST00000603571 367 ntBASIC3□□□□□ -1.93
TMX2-CTNND1H3BSU7 AP000240.1-201ENST00000609910 452 ntBASIC3□□□□□ -1.93
TMX2-CTNND1H3BSU7 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3□□□□□ -1.93
TMX2-CTNND1H3BSU7 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3□□□□□ -1.93
TMX2-CTNND1H3BSU7 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
TMX2-CTNND1H3BSU7 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
TMX2-CTNND1H3BSU7 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3□□□□□ -1.93
TMX2-CTNND1H3BSU7 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
TMX2-CTNND1H3BSU7 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3□□□□□ -1.93
TMX2-CTNND1H3BSU7 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
TMX2-CTNND1H3BSU7 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.99□□□□□ -1.93
TMX2-CTNND1H3BSU7 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
TMX2-CTNND1H3BSU7 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC2.99□□□□□ -1.93
TMX2-CTNND1H3BSU7 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
TMX2-CTNND1H3BSU7 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
TMX2-CTNND1H3BSU7 NSRP1P1-201ENST00000444067 1693 ntBASIC2.99□□□□□ -1.93
TMX2-CTNND1H3BSU7 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
TMX2-CTNND1H3BSU7 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
TMX2-CTNND1H3BSU7 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
TMX2-CTNND1H3BSU7 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC2.99□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.99□□□□□ -1.93
TMX2-CTNND1H3BSU7 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
TMX2-CTNND1H3BSU7 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC2.99□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC2.99□□□□□ -1.93
TMX2-CTNND1H3BSU7 SEPT14P24-201ENST00000447236 180 ntBASIC2.99□□□□□ -1.93
TMX2-CTNND1H3BSU7 UQCRHP3-201ENST00000451503 251 ntBASIC2.99□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC104689.1-201ENST00000473356 768 ntBASIC2.99□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC083906.5-201ENST00000503722 328 ntBASIC2.99□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC111193.1-201ENST00000504097 155 ntBASIC2.99□□□□□ -1.93
TMX2-CTNND1H3BSU7 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.99□□□□□ -1.93
TMX2-CTNND1H3BSU7 SUMO2P5-201ENST00000506790 245 ntBASIC2.99□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC2.99□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC2.99□□□□□ -1.93
TMX2-CTNND1H3BSU7 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.99□□□□□ -1.93
TMX2-CTNND1H3BSU7 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC2.99□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC006518.2-201ENST00000542513 940 ntBASIC2.99□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC011611.5-201ENST00000552477 578 ntBASIC2.99□□□□□ -1.93
TMX2-CTNND1H3BSU7 AL163153.1-201ENST00000554223 283 ntBASIC2.99□□□□□ -1.93
TMX2-CTNND1H3BSU7 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC2.99□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC090751.1-201ENST00000566966 267 ntBASIC2.99□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC023824.3-201ENST00000569003 562 ntBASIC2.99□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC245884.10-201ENST00000597355 337 ntBASIC2.99□□□□□ -1.93
TMX2-CTNND1H3BSU7 NTAN1P1-201ENST00000603150 646 ntBASIC2.99□□□□□ -1.93
TMX2-CTNND1H3BSU7 BNIP3P4-201ENST00000604946 565 ntBASIC2.99□□□□□ -1.93
TMX2-CTNND1H3BSU7 AL158050.2-201ENST00000605336 568 ntBASIC2.99□□□□□ -1.93
TMX2-CTNND1H3BSU7 AL355816.1-201ENST00000607951 118 ntBASIC2.99□□□□□ -1.93
TMX2-CTNND1H3BSU7 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.99□□□□□ -1.93
TMX2-CTNND1H3BSU7 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.99□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC084824.4-201ENST00000620106 731 ntBASIC2.99□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC010608.3-201ENST00000625048 527 ntBASIC2.99□□□□□ -1.93
TMX2-CTNND1H3BSU7 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.99□□□□□ -1.93
TMX2-CTNND1H3BSU7 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
TMX2-CTNND1H3BSU7 MIR6733-201ENST00000635723 61 ntBASIC2.99□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.99□□□□□ -1.93
TMX2-CTNND1H3BSU7 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC2.99□□□□□ -1.93
TMX2-CTNND1H3BSU7 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.99□□□□□ -1.93
TMX2-CTNND1H3BSU7 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC103988.1-201ENST00000566382 2177 ntBASIC2.99□□□□□ -1.93
TMX2-CTNND1H3BSU7 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
TMX2-CTNND1H3BSU7 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC2.99□□□□□ -1.93
TMX2-CTNND1H3BSU7 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
TMX2-CTNND1H3BSU7 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
TMX2-CTNND1H3BSU7 MAPK6PS3-201ENST00000403865 2162 ntBASIC2.98□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.98□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC010733.2-201ENST00000589496 5702 ntBASIC2.98□□□□□ -1.93
TMX2-CTNND1H3BSU7 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
TMX2-CTNND1H3BSU7 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
TMX2-CTNND1H3BSU7 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
TMX2-CTNND1H3BSU7 NFIB-202ENST00000380924 840 ntTSL 5 BASIC2.98□□□□□ -1.93
TMX2-CTNND1H3BSU7 RNU6-298P-201ENST00000390888 96 ntBASIC2.98□□□□□ -1.93
TMX2-CTNND1H3BSU7 UBE2V1P2-201ENST00000397758 440 ntBASIC2.98□□□□□ -1.93
TMX2-CTNND1H3BSU7 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC2.98□□□□□ -1.93
TMX2-CTNND1H3BSU7 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.98□□□□□ -1.93
TMX2-CTNND1H3BSU7 USP9YP21-201ENST00000420603 432 ntBASIC2.98□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC246680.2-201ENST00000422106 389 ntBASIC2.98□□□□□ -1.93
TMX2-CTNND1H3BSU7 MTND2P9-201ENST00000422293 931 ntBASIC2.98□□□□□ -1.93
TMX2-CTNND1H3BSU7 ZNF736P7Y-201ENST00000425158 820 ntBASIC2.98□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC092634.2-201ENST00000428146 1010 ntBASIC2.98□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC008065.1-201ENST00000428525 348 ntBASIC2.98□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.98□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC025750.2-201ENST00000442609 450 ntBASIC2.98□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.98□□□□□ -1.93
TMX2-CTNND1H3BSU7 MTND1P33-201ENST00000446251 917 ntBASIC2.98□□□□□ -1.93
TMX2-CTNND1H3BSU7 AL929288.2-201ENST00000446368 407 ntBASIC2.98□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.98□□□□□ -1.93
TMX2-CTNND1H3BSU7 RPL21P8-201ENST00000465083 535 ntBASIC2.98□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC026801.2-201ENST00000515352 425 ntBASIC2.98□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC008562.1-201ENST00000521763 330 ntBASIC2.98□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC118942.1-201ENST00000529674 1035 ntBASIC2.98□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.98□□□□□ -1.93
TMX2-CTNND1H3BSU7 ZKSCAN7P1-201ENST00000543668 673 ntBASIC2.98□□□□□ -1.93
TMX2-CTNND1H3BSU7 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.98□□□□□ -1.93
TMX2-CTNND1H3BSU7 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.98□□□□□ -1.93
TMX2-CTNND1H3BSU7 MTCO1P40-201ENST00000574371 625 ntBASIC2.98□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms