Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.27□□□□□ -1.89
NPIPA2E9PIF3 DEFB109C-201ENST00000382575 264 ntBASIC3.27□□□□□ -1.89
NPIPA2E9PIF3 DEFB109B-201ENST00000382656 264 ntBASIC3.27□□□□□ -1.89
NPIPA2E9PIF3 U3.29-201ENST00000391296 212 ntBASIC3.27□□□□□ -1.89
NPIPA2E9PIF3 RNU6-712P-201ENST00000410558 100 ntBASIC3.27□□□□□ -1.89
NPIPA2E9PIF3 RNU4-22P-201ENST00000411058 166 ntBASIC3.27□□□□□ -1.89
NPIPA2E9PIF3 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.27□□□□□ -1.89
NPIPA2E9PIF3 AL159987.2-201ENST00000432754 307 ntBASIC3.27□□□□□ -1.89
NPIPA2E9PIF3 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.27□□□□□ -1.89
NPIPA2E9PIF3 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.27□□□□□ -1.89
NPIPA2E9PIF3 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.27□□□□□ -1.89
NPIPA2E9PIF3 RPS3AP12-201ENST00000443616 753 ntBASIC3.27□□□□□ -1.89
NPIPA2E9PIF3 AL031313.1-201ENST00000448435 256 ntBASIC3.27□□□□□ -1.89
NPIPA2E9PIF3 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.27□□□□□ -1.89
NPIPA2E9PIF3 snoU109.4-201ENST00000458953 143 ntBASIC3.27□□□□□ -1.89
NPIPA2E9PIF3 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.27□□□□□ -1.89
NPIPA2E9PIF3 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.27□□□□□ -1.89
NPIPA2E9PIF3 AC010460.2-201ENST00000509054 677 ntBASIC3.27□□□□□ -1.89
NPIPA2E9PIF3 RNA5SP468-201ENST00000516782 93 ntBASIC3.27□□□□□ -1.89
NPIPA2E9PIF3 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.27□□□□□ -1.89
NPIPA2E9PIF3 UBE2NP1-201ENST00000545592 458 ntBASIC3.27□□□□□ -1.89
NPIPA2E9PIF3 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.27□□□□□ -1.89
NPIPA2E9PIF3 EEF1B2P4-201ENST00000551398 348 ntBASIC3.27□□□□□ -1.89
NPIPA2E9PIF3 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.27□□□□□ -1.89
NPIPA2E9PIF3 AL163153.1-201ENST00000554223 283 ntBASIC3.27□□□□□ -1.89
NPIPA2E9PIF3 OR4T1P-201ENST00000554933 911 ntBASIC3.27□□□□□ -1.89
NPIPA2E9PIF3 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.27□□□□□ -1.89
NPIPA2E9PIF3 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.27□□□□□ -1.89
NPIPA2E9PIF3 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.27□□□□□ -1.89
NPIPA2E9PIF3 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.27□□□□□ -1.89
NPIPA2E9PIF3 MTCO2P2-201ENST00000591258 225 ntBASIC3.27□□□□□ -1.89
NPIPA2E9PIF3 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.27□□□□□ -1.89
NPIPA2E9PIF3 KLKP1-201ENST00000595979 403 ntBASIC3.27□□□□□ -1.89
NPIPA2E9PIF3 MTND3P19-201ENST00000603825 345 ntBASIC3.27□□□□□ -1.89
NPIPA2E9PIF3 AL035411.2-201ENST00000604022 421 ntBASIC3.27□□□□□ -1.89
NPIPA2E9PIF3 RNU4-5P-201ENST00000607255 135 ntBASIC3.27□□□□□ -1.89
NPIPA2E9PIF3 MIR7975-201ENST00000619350 68 ntBASIC3.27□□□□□ -1.89
NPIPA2E9PIF3 AC018755.4-201ENST00000619715 454 ntBASIC3.27□□□□□ -1.89
NPIPA2E9PIF3 AC073348.1-201ENST00000623002 331 ntBASIC3.27□□□□□ -1.89
NPIPA2E9PIF3 MIR7153-201ENST00000637758 57 ntBASIC3.27□□□□□ -1.89
NPIPA2E9PIF3 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.27□□□□□ -1.89
NPIPA2E9PIF3 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.27□□□□□ -1.89
NPIPA2E9PIF3 AC106754.1-201ENST00000562632 1513 ntBASIC3.27□□□□□ -1.89
NPIPA2E9PIF3 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.27□□□□□ -1.89
NPIPA2E9PIF3 MTND4P34-201ENST00000572715 1371 ntBASIC3.26□□□□□ -1.89
NPIPA2E9PIF3 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
NPIPA2E9PIF3 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.26□□□□□ -1.89
NPIPA2E9PIF3 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.26□□□□□ -1.89
NPIPA2E9PIF3 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
NPIPA2E9PIF3 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
NPIPA2E9PIF3 RNVU1-14-201ENST00000384770 164 ntBASIC3.26□□□□□ -1.89
NPIPA2E9PIF3 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.26□□□□□ -1.89
NPIPA2E9PIF3 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
NPIPA2E9PIF3 RPS3AP37-201ENST00000419176 745 ntBASIC3.26□□□□□ -1.89
NPIPA2E9PIF3 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.26□□□□□ -1.89
NPIPA2E9PIF3 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.26□□□□□ -1.89
NPIPA2E9PIF3 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.26□□□□□ -1.89
NPIPA2E9PIF3 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.26□□□□□ -1.89
NPIPA2E9PIF3 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
NPIPA2E9PIF3 RFC5P1-201ENST00000454419 874 ntBASIC3.26□□□□□ -1.89
NPIPA2E9PIF3 ARPC3P2-201ENST00000457786 533 ntBASIC3.26□□□□□ -1.89
NPIPA2E9PIF3 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC3.26□□□□□ -1.89
NPIPA2E9PIF3 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC3.26□□□□□ -1.89
NPIPA2E9PIF3 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.26□□□□□ -1.89
NPIPA2E9PIF3 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.26□□□□□ -1.89
NPIPA2E9PIF3 WBP1LP4-201ENST00000505043 344 ntBASIC3.26□□□□□ -1.89
NPIPA2E9PIF3 MTCYBP16-201ENST00000509187 1129 ntBASIC3.26□□□□□ -1.89
NPIPA2E9PIF3 PHBP14-201ENST00000512887 367 ntBASIC3.26□□□□□ -1.89
NPIPA2E9PIF3 AC008837.2-201ENST00000513076 418 ntBASIC3.26□□□□□ -1.89
NPIPA2E9PIF3 RNU6-1225P-201ENST00000516336 65 ntBASIC3.26□□□□□ -1.89
NPIPA2E9PIF3 RN7SKP31-201ENST00000516354 278 ntBASIC3.26□□□□□ -1.89
NPIPA2E9PIF3 SNORA70.18-201ENST00000516696 98 ntBASIC3.26□□□□□ -1.89
NPIPA2E9PIF3 RANP9-201ENST00000519957 271 ntBASIC3.26□□□□□ -1.89
NPIPA2E9PIF3 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
NPIPA2E9PIF3 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC3.26□□□□□ -1.89
NPIPA2E9PIF3 AC103843.2-201ENST00000530523 682 ntBASIC3.26□□□□□ -1.89
NPIPA2E9PIF3 OR4P1P-201ENST00000530808 1136 ntBASIC3.26□□□□□ -1.89
NPIPA2E9PIF3 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC3.26□□□□□ -1.89
NPIPA2E9PIF3 SNORD84-203ENST00000584275 78 ntBASIC3.26□□□□□ -1.89
NPIPA2E9PIF3 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.26□□□□□ -1.89
NPIPA2E9PIF3 AL390838.2-201ENST00000602394 274 ntBASIC3.26□□□□□ -1.89
NPIPA2E9PIF3 AC021749.1-201ENST00000604322 607 ntBASIC3.26□□□□□ -1.89
NPIPA2E9PIF3 AC055876.5-201ENST00000605667 259 ntBASIC3.26□□□□□ -1.89
NPIPA2E9PIF3 AC016877.3-201ENST00000606778 504 ntBASIC3.26□□□□□ -1.89
NPIPA2E9PIF3 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.26□□□□□ -1.89
NPIPA2E9PIF3 AC006213.4-201ENST00000616184 634 ntBASIC3.26□□□□□ -1.89
NPIPA2E9PIF3 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.26□□□□□ -1.89
NPIPA2E9PIF3 AL732618.1-201ENST00000623251 301 ntBASIC3.26□□□□□ -1.89
NPIPA2E9PIF3 CYP3A51P-201ENST00000633513 256 ntBASIC3.26□□□□□ -1.89
NPIPA2E9PIF3 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.26□□□□□ -1.89
NPIPA2E9PIF3 OR6C71P-202ENST00000641886 1107 ntBASIC3.26□□□□□ -1.89
NPIPA2E9PIF3 AL732372.2-225ENST00000642124 456 ntBASIC3.26□□□□□ -1.89
NPIPA2E9PIF3 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.26□□□□□ -1.89
NPIPA2E9PIF3 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.26□□□□□ -1.89
NPIPA2E9PIF3 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
NPIPA2E9PIF3 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
NPIPA2E9PIF3 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.26□□□□□ -1.89
NPIPA2E9PIF3 MTND5P1-201ENST00000445440 1375 ntBASIC3.25□□□□□ -1.89
NPIPA2E9PIF3 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.25□□□□□ -1.89
NPIPA2E9PIF3 AL049780.3-201ENST00000624612 1583 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms