Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CFAP99D6REC4 AC109446.4-201ENST00000623235 2755 ntBASIC6.12□□□□□ -1.43
CFAP99D6REC4 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
CFAP99D6REC4 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.11□□□□□ -1.43
CFAP99D6REC4 AC087516.1-201ENST00000561236 2428 ntBASIC6.11□□□□□ -1.43
CFAP99D6REC4 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CFAP99D6REC4 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.11□□□□□ -1.43
CFAP99D6REC4 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CFAP99D6REC4 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.11□□□□□ -1.43
CFAP99D6REC4 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC6.11□□□□□ -1.43
CFAP99D6REC4 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CFAP99D6REC4 BTBD10P1-201ENST00000549824 1352 ntBASIC6.11□□□□□ -1.43
CFAP99D6REC4 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CFAP99D6REC4 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
CFAP99D6REC4 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
CFAP99D6REC4 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
CFAP99D6REC4 RNA5SP232-201ENST00000364144 119 ntBASIC6.11□□□□□ -1.43
CFAP99D6REC4 RNU6-371P-201ENST00000364283 108 ntBASIC6.11□□□□□ -1.43
CFAP99D6REC4 Y_RNA.270-201ENST00000364693 104 ntBASIC6.11□□□□□ -1.43
CFAP99D6REC4 RNU6-611P-201ENST00000384276 104 ntBASIC6.11□□□□□ -1.43
CFAP99D6REC4 MIR628-201ENST00000385229 95 ntBASIC6.11□□□□□ -1.43
CFAP99D6REC4 AC013442.1-201ENST00000397347 228 ntBASIC6.11□□□□□ -1.43
CFAP99D6REC4 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.11□□□□□ -1.43
CFAP99D6REC4 AC130360.1-201ENST00000425489 1117 ntBASIC6.11□□□□□ -1.43
CFAP99D6REC4 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC6.11□□□□□ -1.43
CFAP99D6REC4 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC6.11□□□□□ -1.43
CFAP99D6REC4 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.11□□□□□ -1.43
CFAP99D6REC4 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.11□□□□□ -1.43
CFAP99D6REC4 CEACAMP6-201ENST00000452007 574 ntBASIC6.11□□□□□ -1.43
CFAP99D6REC4 RPS27AP3-201ENST00000453803 454 ntBASIC6.11□□□□□ -1.43
CFAP99D6REC4 LINC01399-202ENST00000458450 244 ntBASIC6.11□□□□□ -1.43
CFAP99D6REC4 snoU13.29-201ENST00000459370 104 ntBASIC6.11□□□□□ -1.43
CFAP99D6REC4 AL133445.1-201ENST00000467051 452 ntBASIC6.11□□□□□ -1.43
CFAP99D6REC4 AC105384.2-201ENST00000508433 640 ntBASIC6.11□□□□□ -1.43
CFAP99D6REC4 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC6.11□□□□□ -1.43
CFAP99D6REC4 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC6.11□□□□□ -1.43
CFAP99D6REC4 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.11□□□□□ -1.43
CFAP99D6REC4 AC130365.2-201ENST00000525882 1201 ntBASIC6.11□□□□□ -1.43
CFAP99D6REC4 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC6.11□□□□□ -1.43
CFAP99D6REC4 AC036111.2-201ENST00000533247 901 ntBASIC6.11□□□□□ -1.43
CFAP99D6REC4 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC6.11□□□□□ -1.43
CFAP99D6REC4 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC6.11□□□□□ -1.43
CFAP99D6REC4 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
CFAP99D6REC4 AC008555.7-201ENST00000605008 583 ntBASIC6.11□□□□□ -1.43
CFAP99D6REC4 AP001052.1-201ENST00000626421 99 ntBASIC6.11□□□□□ -1.43
CFAP99D6REC4 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.11□□□□□ -1.43
CFAP99D6REC4 AC092070.2-203ENST00000598377 3644 ntBASIC6.11□□□□□ -1.43
CFAP99D6REC4 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
CFAP99D6REC4 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
CFAP99D6REC4 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
CFAP99D6REC4 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
CFAP99D6REC4 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CFAP99D6REC4 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC6.11□□□□□ -1.43
CFAP99D6REC4 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
CFAP99D6REC4 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.11□□□□□ -1.43
CFAP99D6REC4 AC005725.1-201ENST00000577346 2607 ntBASIC6.11□□□□□ -1.43
CFAP99D6REC4 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CFAP99D6REC4 AC068870.1-201ENST00000563737 2455 ntBASIC6.1□□□□□ -1.43
CFAP99D6REC4 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
CFAP99D6REC4 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CFAP99D6REC4 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CFAP99D6REC4 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
CFAP99D6REC4 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.1□□□□□ -1.43
CFAP99D6REC4 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
CFAP99D6REC4 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
CFAP99D6REC4 PHKBP1-201ENST00000450951 1951 ntBASIC6.1□□□□□ -1.43
CFAP99D6REC4 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CFAP99D6REC4 Y_RNA.183-201ENST00000363882 113 ntBASIC6.1□□□□□ -1.43
CFAP99D6REC4 RNY3P11-201ENST00000364153 102 ntBASIC6.1□□□□□ -1.43
CFAP99D6REC4 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.1□□□□□ -1.43
CFAP99D6REC4 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CFAP99D6REC4 CDC123-202ENST00000378900 933 ntTSL 5 BASIC6.1□□□□□ -1.43
CFAP99D6REC4 RNU6-746P-201ENST00000384112 109 ntBASIC6.1□□□□□ -1.43
CFAP99D6REC4 RNU6-933P-201ENST00000384424 107 ntBASIC6.1□□□□□ -1.43
CFAP99D6REC4 RPL21P90-201ENST00000415692 466 ntBASIC6.1□□□□□ -1.43
CFAP99D6REC4 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC6.1□□□□□ -1.43
CFAP99D6REC4 AL391219.1-201ENST00000422570 483 ntBASIC6.1□□□□□ -1.43
CFAP99D6REC4 AC016712.1-201ENST00000431088 378 ntBASIC6.1□□□□□ -1.43
CFAP99D6REC4 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.1□□□□□ -1.43
CFAP99D6REC4 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.1□□□□□ -1.43
CFAP99D6REC4 GAPDHP59-201ENST00000435908 267 ntBASIC6.1□□□□□ -1.43
CFAP99D6REC4 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC6.1□□□□□ -1.43
CFAP99D6REC4 EEF1B2P3-201ENST00000447718 678 ntBASIC6.1□□□□□ -1.43
CFAP99D6REC4 RNU7-169P-201ENST00000459456 61 ntBASIC6.1□□□□□ -1.43
CFAP99D6REC4 RN7SL717P-201ENST00000478343 297 ntBASIC6.1□□□□□ -1.43
CFAP99D6REC4 AL117692.1-201ENST00000494283 713 ntBASIC6.1□□□□□ -1.43
CFAP99D6REC4 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC6.1□□□□□ -1.43
CFAP99D6REC4 NDUFB4P9-201ENST00000511646 388 ntBASIC6.1□□□□□ -1.43
CFAP99D6REC4 RNU5B-3P-201ENST00000516601 115 ntBASIC6.1□□□□□ -1.43
CFAP99D6REC4 RN7SKP277-201ENST00000516895 283 ntBASIC6.1□□□□□ -1.43
CFAP99D6REC4 RN7SKP183-201ENST00000517169 324 ntBASIC6.1□□□□□ -1.43
CFAP99D6REC4 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.1□□□□□ -1.43
CFAP99D6REC4 AC034114.1-201ENST00000520293 285 ntBASIC6.1□□□□□ -1.43
CFAP99D6REC4 AC087369.1-201ENST00000520775 996 ntBASIC6.1□□□□□ -1.43
CFAP99D6REC4 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC6.1□□□□□ -1.43
CFAP99D6REC4 AC068446.3-201ENST00000555285 382 ntBASIC6.1□□□□□ -1.43
CFAP99D6REC4 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC6.1□□□□□ -1.43
CFAP99D6REC4 AC009852.2-201ENST00000567898 485 ntBASIC6.1□□□□□ -1.43
CFAP99D6REC4 AC004584.2-201ENST00000570407 410 ntBASIC6.1□□□□□ -1.43
CFAP99D6REC4 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms