Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
CPSF4LA6NMK7 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
CPSF4LA6NMK7 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
CPSF4LA6NMK7 RNU6-301P-201ENST00000384277 107 ntBASIC1.87□□□□□ -2.11
CPSF4LA6NMK7 SNORA51.11-201ENST00000384442 131 ntBASIC1.87□□□□□ -2.11
CPSF4LA6NMK7 Y_RNA.510-201ENST00000384511 114 ntBASIC1.87□□□□□ -2.11
CPSF4LA6NMK7 HSPE1P26-201ENST00000405341 275 ntBASIC1.87□□□□□ -2.11
CPSF4LA6NMK7 AL139156.1-201ENST00000412785 841 ntBASIC1.87□□□□□ -2.11
CPSF4LA6NMK7 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC1.87□□□□□ -2.11
CPSF4LA6NMK7 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC1.87□□□□□ -2.11
CPSF4LA6NMK7 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC1.87□□□□□ -2.11
CPSF4LA6NMK7 MTCO3P11-201ENST00000455103 774 ntBASIC1.87□□□□□ -2.11
CPSF4LA6NMK7 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC1.87□□□□□ -2.11
CPSF4LA6NMK7 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC1.87□□□□□ -2.11
CPSF4LA6NMK7 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
CPSF4LA6NMK7 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC1.87□□□□□ -2.11
CPSF4LA6NMK7 DSTNP2-201ENST00000504533 515 ntBASIC1.87□□□□□ -2.11
CPSF4LA6NMK7 AC104090.1-201ENST00000506341 1171 ntBASIC1.87□□□□□ -2.11
CPSF4LA6NMK7 RPS3AP23-202ENST00000574601 686 ntBASIC1.87□□□□□ -2.11
CPSF4LA6NMK7 SNORD53-201ENST00000579969 78 ntBASIC1.87□□□□□ -2.11
CPSF4LA6NMK7 AC120053.1-201ENST00000607706 736 ntBASIC1.87□□□□□ -2.11
CPSF4LA6NMK7 CR589904.2-201ENST00000612533 440 ntBASIC1.87□□□□□ -2.11
CPSF4LA6NMK7 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC1.87□□□□□ -2.11
CPSF4LA6NMK7 IGHVIII-44-202ENST00000636235 289 ntBASIC1.87□□□□□ -2.11
CPSF4LA6NMK7 CNOT6LP1-201ENST00000559681 1462 ntBASIC1.87□□□□□ -2.11
CPSF4LA6NMK7 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC1.86□□□□□ -2.11
CPSF4LA6NMK7 AC010680.1-201ENST00000590024 3590 ntBASIC1.86□□□□□ -2.11
CPSF4LA6NMK7 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.86□□□□□ -2.11
CPSF4LA6NMK7 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC1.86□□□□□ -2.11
CPSF4LA6NMK7 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CPSF4LA6NMK7 ANKRD36P1-201ENST00000344424 659 ntBASIC1.86□□□□□ -2.11
CPSF4LA6NMK7 RNU6-525P-201ENST00000363685 104 ntBASIC1.86□□□□□ -2.11
CPSF4LA6NMK7 ANAPC10P1-201ENST00000395991 556 ntBASIC1.86□□□□□ -2.11
CPSF4LA6NMK7 EIF4EBP2P3-201ENST00000403144 334 ntBASIC1.86□□□□□ -2.11
CPSF4LA6NMK7 AL023284.1-201ENST00000403956 276 ntBASIC1.86□□□□□ -2.11
CPSF4LA6NMK7 HMGB3P2-201ENST00000411913 584 ntBASIC1.86□□□□□ -2.11
CPSF4LA6NMK7 MTND2P2-201ENST00000434633 945 ntBASIC1.86□□□□□ -2.11
CPSF4LA6NMK7 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC1.86□□□□□ -2.11
CPSF4LA6NMK7 SNORD108-201ENST00000459332 71 ntBASIC1.86□□□□□ -2.11
CPSF4LA6NMK7 AP000852.1-201ENST00000472460 573 ntBASIC1.86□□□□□ -2.11
CPSF4LA6NMK7 AC104687.1-201ENST00000485829 412 ntBASIC1.86□□□□□ -2.11
CPSF4LA6NMK7 AC106734.1-201ENST00000568646 663 ntBASIC1.86□□□□□ -2.11
CPSF4LA6NMK7 AC009163.5-201ENST00000575421 637 ntBASIC1.86□□□□□ -2.11
CPSF4LA6NMK7 MIR4672-201ENST00000583126 81 ntBASIC1.86□□□□□ -2.11
CPSF4LA6NMK7 AL133393.1-201ENST00000603277 287 ntBASIC1.86□□□□□ -2.11
CPSF4LA6NMK7 Y_RNA.783-201ENST00000613546 102 ntBASIC1.86□□□□□ -2.11
CPSF4LA6NMK7 AL589935.2-201ENST00000616471 1231 ntBASIC1.86□□□□□ -2.11
CPSF4LA6NMK7 AL162233.1-201ENST00000620014 944 ntBASIC1.86□□□□□ -2.11
CPSF4LA6NMK7 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.86□□□□□ -2.11
CPSF4LA6NMK7 HSP90AA5P-201ENST00000438353 2192 ntBASIC1.86□□□□□ -2.11
CPSF4LA6NMK7 AC103988.1-201ENST00000566382 2177 ntBASIC1.86□□□□□ -2.11
CPSF4LA6NMK7 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
CPSF4LA6NMK7 MTND4P35-201ENST00000604257 1375 ntBASIC1.85□□□□□ -2.11
CPSF4LA6NMK7 AC080100.1-201ENST00000624239 5356 ntBASIC1.85□□□□□ -2.11
CPSF4LA6NMK7 RN7SKP32-201ENST00000410167 303 ntBASIC1.85□□□□□ -2.11
CPSF4LA6NMK7 MTCO1P43-201ENST00000431831 488 ntBASIC1.85□□□□□ -2.11
CPSF4LA6NMK7 AL590664.1-201ENST00000448065 339 ntBASIC1.85□□□□□ -2.11
CPSF4LA6NMK7 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.85□□□□□ -2.11
CPSF4LA6NMK7 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC1.85□□□□□ -2.11
CPSF4LA6NMK7 RPL21P131-201ENST00000497298 483 ntBASIC1.85□□□□□ -2.11
CPSF4LA6NMK7 SMARCE1P4-201ENST00000523647 241 ntBASIC1.85□□□□□ -2.11
CPSF4LA6NMK7 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC1.85□□□□□ -2.11
CPSF4LA6NMK7 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.85□□□□□ -2.11
CPSF4LA6NMK7 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC1.85□□□□□ -2.11
CPSF4LA6NMK7 AC009063.1-201ENST00000563342 702 ntBASIC1.85□□□□□ -2.11
CPSF4LA6NMK7 MTCO3P22-201ENST00000603219 784 ntBASIC1.85□□□□□ -2.11
CPSF4LA6NMK7 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC1.85□□□□□ -2.11
CPSF4LA6NMK7 AC009318.3-201ENST00000616916 503 ntBASIC1.85□□□□□ -2.11
CPSF4LA6NMK7 AL356266.1-201ENST00000623311 483 ntBASIC1.85□□□□□ -2.11
CPSF4LA6NMK7 CR382285.2-201ENST00000624662 1495 ntBASIC1.85□□□□□ -2.11
CPSF4LA6NMK7 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.85□□□□□ -2.11
CPSF4LA6NMK7 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC1.85□□□□□ -2.11
CPSF4LA6NMK7 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
CPSF4LA6NMK7 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.84□□□□□ -2.11
CPSF4LA6NMK7 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
CPSF4LA6NMK7 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
CPSF4LA6NMK7 RNU4-82P-201ENST00000362443 140 ntBASIC1.84□□□□□ -2.11
CPSF4LA6NMK7 RNA5SP393-201ENST00000363423 117 ntBASIC1.84□□□□□ -2.11
CPSF4LA6NMK7 AP000567.1-201ENST00000406413 156 ntBASIC1.84□□□□□ -2.11
CPSF4LA6NMK7 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC1.84□□□□□ -2.11
CPSF4LA6NMK7 RPL17P12-201ENST00000413391 526 ntBASIC1.84□□□□□ -2.11
CPSF4LA6NMK7 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC1.84□□□□□ -2.11
CPSF4LA6NMK7 AC092013.1-201ENST00000438795 332 ntBASIC1.84□□□□□ -2.11
CPSF4LA6NMK7 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC1.84□□□□□ -2.11
CPSF4LA6NMK7 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.84□□□□□ -2.11
CPSF4LA6NMK7 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.84□□□□□ -2.11
CPSF4LA6NMK7 RNA5SP364-201ENST00000516938 78 ntBASIC1.84□□□□□ -2.11
CPSF4LA6NMK7 AC027309.2-201ENST00000520566 192 ntBASIC1.84□□□□□ -2.11
CPSF4LA6NMK7 IGKV3-31-201ENST00000523109 329 ntBASIC1.84□□□□□ -2.11
CPSF4LA6NMK7 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.84□□□□□ -2.11
CPSF4LA6NMK7 AHI1-217ENST00000534469 680 ntTSL 3 BASIC1.84□□□□□ -2.11
CPSF4LA6NMK7 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.84□□□□□ -2.11
CPSF4LA6NMK7 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
CPSF4LA6NMK7 MIMT1-201ENST00000597105 1050 ntBASIC1.84□□□□□ -2.11
CPSF4LA6NMK7 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC1.84□□□□□ -2.11
CPSF4LA6NMK7 AC245517.5-201ENST00000611529 162 ntBASIC1.84□□□□□ -2.11
CPSF4LA6NMK7 RBM12B-AS1-201ENST00000623283 653 ntBASIC1.84□□□□□ -2.11
CPSF4LA6NMK7 RPL23AP61-201ENST00000623642 466 ntBASIC1.84□□□□□ -2.11
CPSF4LA6NMK7 AC119674.1-212ENST00000641155 993 ntBASIC1.84□□□□□ -2.11
CPSF4LA6NMK7 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms