Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 AC011451.2-201ENST00000604303 598 ntBASIC5.27□□□□□ -1.57
CCDC85CA6NKD9 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC85CA6NKD9 AL161734.1-201ENST00000609720 557 ntBASIC5.27□□□□□ -1.57
CCDC85CA6NKD9 AL133173.2-201ENST00000614270 90 ntBASIC5.27□□□□□ -1.57
CCDC85CA6NKD9 AL022401.1-201ENST00000619498 108 ntBASIC5.27□□□□□ -1.57
CCDC85CA6NKD9 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.27□□□□□ -1.57
CCDC85CA6NKD9 U3.53-201ENST00000628922 216 ntBASIC5.27□□□□□ -1.57
CCDC85CA6NKD9 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC85CA6NKD9 AL022311.1-201ENST00000623726 19416 ntBASIC5.27□□□□□ -1.57
CCDC85CA6NKD9 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC85CA6NKD9 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
CCDC85CA6NKD9 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.27□□□□□ -1.57
CCDC85CA6NKD9 GHR-213ENST00000622294 4312 ntTSL 5 BASIC5.27□□□□□ -1.57
CCDC85CA6NKD9 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.26□□□□□ -1.57
CCDC85CA6NKD9 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC85CA6NKD9 AC090229.1-201ENST00000590983 1609 ntBASIC5.26□□□□□ -1.57
CCDC85CA6NKD9 GVINP1-202ENST00000531871 7271 ntBASIC5.26□□□□□ -1.57
CCDC85CA6NKD9 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC85CA6NKD9 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
CCDC85CA6NKD9 MFF-206ENST00000392059 1710 ntTSL 5 BASIC5.26□□□□□ -1.57
CCDC85CA6NKD9 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC85CA6NKD9 RNU5A-8P-201ENST00000364102 114 ntBASIC5.26□□□□□ -1.57
CCDC85CA6NKD9 RNU6-356P-201ENST00000384140 107 ntBASIC5.26□□□□□ -1.57
CCDC85CA6NKD9 RNU6-114P-201ENST00000384704 105 ntBASIC5.26□□□□□ -1.57
CCDC85CA6NKD9 MIR19A-201ENST00000384878 82 ntBASIC5.26□□□□□ -1.57
CCDC85CA6NKD9 SNORD115-47-201ENST00000391226 86 ntBASIC5.26□□□□□ -1.57
CCDC85CA6NKD9 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC5.26□□□□□ -1.57
CCDC85CA6NKD9 GNG5P5-201ENST00000420444 220 ntBASIC5.26□□□□□ -1.57
CCDC85CA6NKD9 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC5.26□□□□□ -1.57
CCDC85CA6NKD9 AC019097.1-201ENST00000424783 735 ntBASIC5.26□□□□□ -1.57
CCDC85CA6NKD9 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC85CA6NKD9 AC002486.1-201ENST00000435098 391 ntBASIC5.26□□□□□ -1.57
CCDC85CA6NKD9 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.26□□□□□ -1.57
CCDC85CA6NKD9 AC116353.2-201ENST00000505332 712 ntBASIC5.26□□□□□ -1.57
CCDC85CA6NKD9 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC5.26□□□□□ -1.57
CCDC85CA6NKD9 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC5.26□□□□□ -1.57
CCDC85CA6NKD9 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC5.26□□□□□ -1.57
CCDC85CA6NKD9 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC5.26□□□□□ -1.57
CCDC85CA6NKD9 RNU6-528P-201ENST00000516926 100 ntBASIC5.26□□□□□ -1.57
CCDC85CA6NKD9 RN7SKP289-201ENST00000517244 295 ntBASIC5.26□□□□□ -1.57
CCDC85CA6NKD9 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC85CA6NKD9 RPS3AP4-201ENST00000555161 764 ntBASIC5.26□□□□□ -1.57
CCDC85CA6NKD9 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.26□□□□□ -1.57
CCDC85CA6NKD9 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC5.26□□□□□ -1.57
CCDC85CA6NKD9 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.26□□□□□ -1.57
CCDC85CA6NKD9 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC5.26□□□□□ -1.57
CCDC85CA6NKD9 AC007363.1-201ENST00000604736 620 ntBASIC5.26□□□□□ -1.57
CCDC85CA6NKD9 MIR98-201ENST00000606724 119 ntBASIC5.26□□□□□ -1.57
CCDC85CA6NKD9 AC116312.1-201ENST00000606841 314 ntBASIC5.26□□□□□ -1.57
CCDC85CA6NKD9 AC104458.1-201ENST00000608243 463 ntBASIC5.26□□□□□ -1.57
CCDC85CA6NKD9 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.26□□□□□ -1.57
CCDC85CA6NKD9 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
CCDC85CA6NKD9 AL159972.1-201ENST00000625150 448 ntBASIC5.26□□□□□ -1.57
CCDC85CA6NKD9 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC85CA6NKD9 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC85CA6NKD9 BTBD10P1-201ENST00000549824 1352 ntBASIC5.26□□□□□ -1.57
CCDC85CA6NKD9 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC85CA6NKD9 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC5.26□□□□□ -1.57
CCDC85CA6NKD9 Z73965.1-201ENST00000623412 2297 ntBASIC5.26□□□□□ -1.57
CCDC85CA6NKD9 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC85CA6NKD9 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC85CA6NKD9 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.25□□□□□ -1.57
CCDC85CA6NKD9 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC85CA6NKD9 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
CCDC85CA6NKD9 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC85CA6NKD9 RNU6-282P-201ENST00000365357 103 ntBASIC5.25□□□□□ -1.57
CCDC85CA6NKD9 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CCDC85CA6NKD9 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC5.25□□□□□ -1.57
CCDC85CA6NKD9 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC5.25□□□□□ -1.57
CCDC85CA6NKD9 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
CCDC85CA6NKD9 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.25□□□□□ -1.57
CCDC85CA6NKD9 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC5.25□□□□□ -1.57
CCDC85CA6NKD9 AC236972.1-201ENST00000433225 199 ntBASIC5.25□□□□□ -1.57
CCDC85CA6NKD9 TIMM9P1-201ENST00000436122 256 ntBASIC5.25□□□□□ -1.57
CCDC85CA6NKD9 FTH1P1-201ENST00000437933 532 ntBASIC5.25□□□□□ -1.57
CCDC85CA6NKD9 BX679664.2-201ENST00000439282 283 ntBASIC5.25□□□□□ -1.57
CCDC85CA6NKD9 AC093156.1-201ENST00000440382 670 ntBASIC5.25□□□□□ -1.57
CCDC85CA6NKD9 RPS4XP4-201ENST00000443195 763 ntBASIC5.25□□□□□ -1.57
CCDC85CA6NKD9 FTH1P21-201ENST00000512179 511 ntBASIC5.25□□□□□ -1.57
CCDC85CA6NKD9 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC5.25□□□□□ -1.57
CCDC85CA6NKD9 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.25□□□□□ -1.57
CCDC85CA6NKD9 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC5.25□□□□□ -1.57
CCDC85CA6NKD9 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC5.25□□□□□ -1.57
CCDC85CA6NKD9 MIR4458-201ENST00000578872 75 ntBASIC5.25□□□□□ -1.57
CCDC85CA6NKD9 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.25□□□□□ -1.57
CCDC85CA6NKD9 AC008277.2-201ENST00000605196 797 ntBASIC5.25□□□□□ -1.57
CCDC85CA6NKD9 AL121932.1-201ENST00000605542 214 ntBASIC5.25□□□□□ -1.57
CCDC85CA6NKD9 RNA5SP108-201ENST00000605921 117 ntBASIC5.25□□□□□ -1.57
CCDC85CA6NKD9 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC5.25□□□□□ -1.57
CCDC85CA6NKD9 AL355073.2-201ENST00000612106 557 ntBASIC5.25□□□□□ -1.57
CCDC85CA6NKD9 AL442067.2-201ENST00000614033 363 ntBASIC5.25□□□□□ -1.57
CCDC85CA6NKD9 U6.42-201ENST00000618440 107 ntBASIC5.25□□□□□ -1.57
CCDC85CA6NKD9 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC5.25□□□□□ -1.57
CCDC85CA6NKD9 AL356585.4-201ENST00000623078 1229 ntBASIC5.25□□□□□ -1.57
CCDC85CA6NKD9 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC5.25□□□□□ -1.57
CCDC85CA6NKD9 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
CCDC85CA6NKD9 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.25□□□□□ -1.57
CCDC85CA6NKD9 AC233263.6-201ENST00000631132 1963 ntBASIC5.25□□□□□ -1.57
CCDC85CA6NKD9 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
CCDC85CA6NKD9 LARP1BP1-201ENST00000506036 1359 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms