Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 AC092608.2-201ENST00000624427 218 ntBASIC2.11□□□□□ -2.07
TCRBV3S1A0A5B6 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.11□□□□□ -2.07
TCRBV3S1A0A5B6 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
TCRBV3S1A0A5B6 AC138915.1-201ENST00000565427 1685 ntBASIC2.11□□□□□ -2.07
TCRBV3S1A0A5B6 AC008432.1-201ENST00000615912 1320 ntBASIC2.11□□□□□ -2.07
TCRBV3S1A0A5B6 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
TCRBV3S1A0A5B6 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.1□□□□□ -2.07
TCRBV3S1A0A5B6 AC009487.4-201ENST00000624969 3585 ntBASIC2.1□□□□□ -2.07
TCRBV3S1A0A5B6 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
TCRBV3S1A0A5B6 AC097714.1-201ENST00000511272 1647 ntBASIC2.1□□□□□ -2.07
TCRBV3S1A0A5B6 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
TCRBV3S1A0A5B6 ZNF833P-201ENST00000424938 1494 ntBASIC2.1□□□□□ -2.07
TCRBV3S1A0A5B6 RNU2-52P-201ENST00000410680 190 ntBASIC2.1□□□□□ -2.07
TCRBV3S1A0A5B6 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.1□□□□□ -2.07
TCRBV3S1A0A5B6 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.1□□□□□ -2.07
TCRBV3S1A0A5B6 LSM1P1-201ENST00000438629 273 ntBASIC2.1□□□□□ -2.07
TCRBV3S1A0A5B6 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC2.1□□□□□ -2.07
TCRBV3S1A0A5B6 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.1□□□□□ -2.07
TCRBV3S1A0A5B6 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.1□□□□□ -2.07
TCRBV3S1A0A5B6 AL157827.1-201ENST00000447622 132 ntBASIC2.1□□□□□ -2.07
TCRBV3S1A0A5B6 RPL23AP7-203ENST00000449021 469 ntBASIC2.1□□□□□ -2.07
TCRBV3S1A0A5B6 Z99714.1-201ENST00000450463 807 ntBASIC2.1□□□□□ -2.07
TCRBV3S1A0A5B6 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.1□□□□□ -2.07
TCRBV3S1A0A5B6 SNORA84-201ENST00000459229 133 ntBASIC2.1□□□□□ -2.07
TCRBV3S1A0A5B6 AC135721.1-201ENST00000497954 479 ntBASIC2.1□□□□□ -2.07
TCRBV3S1A0A5B6 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.1□□□□□ -2.07
TCRBV3S1A0A5B6 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.1□□□□□ -2.07
TCRBV3S1A0A5B6 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.1□□□□□ -2.07
TCRBV3S1A0A5B6 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.1□□□□□ -2.07
TCRBV3S1A0A5B6 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.1□□□□□ -2.07
TCRBV3S1A0A5B6 AC087373.1-201ENST00000524920 491 ntBASIC2.1□□□□□ -2.07
TCRBV3S1A0A5B6 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
TCRBV3S1A0A5B6 CASP1-216ENST00000534497 825 ntTSL 5 BASIC2.1□□□□□ -2.07
TCRBV3S1A0A5B6 SERPINE4P-201ENST00000554978 281 ntBASIC2.1□□□□□ -2.07
TCRBV3S1A0A5B6 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC2.1□□□□□ -2.07
TCRBV3S1A0A5B6 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.1□□□□□ -2.07
TCRBV3S1A0A5B6 AC009163.5-201ENST00000575421 637 ntBASIC2.1□□□□□ -2.07
TCRBV3S1A0A5B6 AC069304.3-201ENST00000603938 1084 ntBASIC2.1□□□□□ -2.07
TCRBV3S1A0A5B6 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.1□□□□□ -2.07
TCRBV3S1A0A5B6 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.1□□□□□ -2.07
TCRBV3S1A0A5B6 AC107294.1-201ENST00000609524 467 ntBASIC2.1□□□□□ -2.07
TCRBV3S1A0A5B6 AL391834.1-201ENST00000609609 560 ntBASIC2.1□□□□□ -2.07
TCRBV3S1A0A5B6 MIR6895-201ENST00000613497 78 ntBASIC2.1□□□□□ -2.07
TCRBV3S1A0A5B6 AC009831.4-201ENST00000620744 325 ntBASIC2.1□□□□□ -2.07
TCRBV3S1A0A5B6 AC092159.4-201ENST00000624944 550 ntBASIC2.1□□□□□ -2.07
TCRBV3S1A0A5B6 AC093591.3-201ENST00000634516 308 ntBASIC2.1□□□□□ -2.07
TCRBV3S1A0A5B6 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
TCRBV3S1A0A5B6 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.1□□□□□ -2.07
TCRBV3S1A0A5B6 AP001350.1-201ENST00000601906 1524 ntBASIC2.1□□□□□ -2.07
TCRBV3S1A0A5B6 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.09□□□□□ -2.07
TCRBV3S1A0A5B6 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.09□□□□□ -2.07
TCRBV3S1A0A5B6 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
TCRBV3S1A0A5B6 RNA5SP138-201ENST00000365098 114 ntBASIC2.09□□□□□ -2.07
TCRBV3S1A0A5B6 RNU6-532P-201ENST00000384318 107 ntBASIC2.09□□□□□ -2.07
TCRBV3S1A0A5B6 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.09□□□□□ -2.07
TCRBV3S1A0A5B6 MTATP6P4-201ENST00000427725 675 ntBASIC2.09□□□□□ -2.07
TCRBV3S1A0A5B6 ARL5AP4-201ENST00000430731 512 ntBASIC2.09□□□□□ -2.07
TCRBV3S1A0A5B6 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.09□□□□□ -2.07
TCRBV3S1A0A5B6 AL591719.1-201ENST00000444669 744 ntBASIC2.09□□□□□ -2.07
TCRBV3S1A0A5B6 CDC27P1-201ENST00000445384 715 ntBASIC2.09□□□□□ -2.07
TCRBV3S1A0A5B6 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.09□□□□□ -2.07
TCRBV3S1A0A5B6 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
TCRBV3S1A0A5B6 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC2.09□□□□□ -2.07
TCRBV3S1A0A5B6 AC010625.1-201ENST00000511296 403 ntBASIC2.09□□□□□ -2.07
TCRBV3S1A0A5B6 ACTR6P1-201ENST00000514311 1104 ntBASIC2.09□□□□□ -2.07
TCRBV3S1A0A5B6 RPPH1-2P-201ENST00000516688 293 ntBASIC2.09□□□□□ -2.07
TCRBV3S1A0A5B6 AC025755.1-201ENST00000521306 278 ntBASIC2.09□□□□□ -2.07
TCRBV3S1A0A5B6 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC2.09□□□□□ -2.07
TCRBV3S1A0A5B6 AC121758.2-201ENST00000553271 193 ntBASIC2.09□□□□□ -2.07
TCRBV3S1A0A5B6 MIR4444-1-201ENST00000581696 74 ntBASIC2.09□□□□□ -2.07
TCRBV3S1A0A5B6 MIR4444-2-201ENST00000584390 74 ntBASIC2.09□□□□□ -2.07
TCRBV3S1A0A5B6 AL133507.1-201ENST00000605269 557 ntBASIC2.09□□□□□ -2.07
TCRBV3S1A0A5B6 AC008962.1-201ENST00000605729 304 ntBASIC2.09□□□□□ -2.07
TCRBV3S1A0A5B6 CR392039.4-201ENST00000624968 501 ntBASIC2.09□□□□□ -2.07
TCRBV3S1A0A5B6 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC2.09□□□□□ -2.08
TCRBV3S1A0A5B6 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
TCRBV3S1A0A5B6 MTND4P1-201ENST00000457501 1466 ntBASIC2.08□□□□□ -2.08
TCRBV3S1A0A5B6 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.08□□□□□ -2.08
TCRBV3S1A0A5B6 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
TCRBV3S1A0A5B6 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
TCRBV3S1A0A5B6 OR56A5-201ENST00000340110 738 ntBASIC2.08□□□□□ -2.08
TCRBV3S1A0A5B6 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.08□□□□□ -2.08
TCRBV3S1A0A5B6 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.08□□□□□ -2.08
TCRBV3S1A0A5B6 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.08□□□□□ -2.08
TCRBV3S1A0A5B6 AL021397.1-201ENST00000451806 248 ntBASIC2.08□□□□□ -2.08
TCRBV3S1A0A5B6 AC025033.1-201ENST00000463883 194 ntBASIC2.08□□□□□ -2.08
TCRBV3S1A0A5B6 AC011825.1-201ENST00000484967 388 ntBASIC2.08□□□□□ -2.08
TCRBV3S1A0A5B6 RPL23AP49-201ENST00000492925 468 ntBASIC2.08□□□□□ -2.08
TCRBV3S1A0A5B6 AC080014.1-201ENST00000496877 1201 ntBASIC2.08□□□□□ -2.08
TCRBV3S1A0A5B6 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC2.08□□□□□ -2.08
TCRBV3S1A0A5B6 SETP12-201ENST00000514068 805 ntBASIC2.08□□□□□ -2.08
TCRBV3S1A0A5B6 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.08□□□□□ -2.08
TCRBV3S1A0A5B6 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC2.08□□□□□ -2.08
TCRBV3S1A0A5B6 COX6CP8-201ENST00000522620 226 ntBASIC2.08□□□□□ -2.08
TCRBV3S1A0A5B6 OR4R1P-201ENST00000529879 463 ntBASIC2.08□□□□□ -2.08
TCRBV3S1A0A5B6 AC021269.2-201ENST00000532318 330 ntBASIC2.08□□□□□ -2.08
TCRBV3S1A0A5B6 OSBPL9P3-201ENST00000534523 595 ntBASIC2.08□□□□□ -2.08
TCRBV3S1A0A5B6 CR383656.14-201ENST00000551951 406 ntBASIC2.08□□□□□ -2.08
TCRBV3S1A0A5B6 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.08□□□□□ -2.08
TCRBV3S1A0A5B6 ELOCP29-201ENST00000588193 334 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms