Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC1.66□□□□□ -2.14
TRAV13-2A0A0B4J235 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC1.66□□□□□ -2.14
TRAV13-2A0A0B4J235 AC079597.1-201ENST00000624306 508 ntBASIC1.66□□□□□ -2.14
TRAV13-2A0A0B4J235 AC007342.9-201ENST00000623877 1385 ntBASIC1.66□□□□□ -2.14
TRAV13-2A0A0B4J235 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
TRAV13-2A0A0B4J235 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
TRAV13-2A0A0B4J235 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.14
TRAV13-2A0A0B4J235 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC1.65□□□□□ -2.15
TRAV13-2A0A0B4J235 AL596028.1-201ENST00000326971 197 ntBASIC1.65□□□□□ -2.15
TRAV13-2A0A0B4J235 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC1.65□□□□□ -2.15
TRAV13-2A0A0B4J235 RNA5SP37-201ENST00000365420 130 ntBASIC1.65□□□□□ -2.15
TRAV13-2A0A0B4J235 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.65□□□□□ -2.15
TRAV13-2A0A0B4J235 SNORA56-201ENST00000383966 129 ntBASIC1.65□□□□□ -2.15
TRAV13-2A0A0B4J235 RNU6-185P-201ENST00000384421 107 ntBASIC1.65□□□□□ -2.15
TRAV13-2A0A0B4J235 RNU6-1072P-201ENST00000384703 107 ntBASIC1.65□□□□□ -2.15
TRAV13-2A0A0B4J235 RNU6-443P-201ENST00000384780 107 ntBASIC1.65□□□□□ -2.15
TRAV13-2A0A0B4J235 MIR490-201ENST00000384865 128 ntBASIC1.65□□□□□ -2.15
TRAV13-2A0A0B4J235 U3.37-201ENST00000408528 213 ntBASIC1.65□□□□□ -2.15
TRAV13-2A0A0B4J235 RPL26P37-201ENST00000411983 438 ntBASIC1.65□□□□□ -2.15
TRAV13-2A0A0B4J235 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.65□□□□□ -2.15
TRAV13-2A0A0B4J235 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
TRAV13-2A0A0B4J235 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC1.65□□□□□ -2.15
TRAV13-2A0A0B4J235 ATP5F1P1-201ENST00000433775 569 ntBASIC1.65□□□□□ -2.15
TRAV13-2A0A0B4J235 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC1.65□□□□□ -2.15
TRAV13-2A0A0B4J235 PGBD4P3-201ENST00000440731 581 ntBASIC1.65□□□□□ -2.15
TRAV13-2A0A0B4J235 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC1.65□□□□□ -2.15
TRAV13-2A0A0B4J235 AL121871.1-201ENST00000443413 436 ntBASIC1.65□□□□□ -2.15
TRAV13-2A0A0B4J235 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC1.65□□□□□ -2.15
TRAV13-2A0A0B4J235 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC1.65□□□□□ -2.15
TRAV13-2A0A0B4J235 HMGB1P26-201ENST00000452520 628 ntBASIC1.65□□□□□ -2.15
TRAV13-2A0A0B4J235 AC008280.2-201ENST00000455473 307 ntBASIC1.65□□□□□ -2.15
TRAV13-2A0A0B4J235 RPS15AP34-201ENST00000487776 387 ntBASIC1.65□□□□□ -2.15
TRAV13-2A0A0B4J235 AP001960.1-201ENST00000506494 658 ntBASIC1.65□□□□□ -2.15
TRAV13-2A0A0B4J235 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC1.65□□□□□ -2.15
TRAV13-2A0A0B4J235 AC092593.2-201ENST00000513866 913 ntBASIC1.65□□□□□ -2.15
TRAV13-2A0A0B4J235 AC034244.2-201ENST00000514668 858 ntBASIC1.65□□□□□ -2.15
TRAV13-2A0A0B4J235 RNU1-45P-201ENST00000517191 141 ntBASIC1.65□□□□□ -2.15
TRAV13-2A0A0B4J235 AP003467.2-201ENST00000520175 319 ntBASIC1.65□□□□□ -2.15
TRAV13-2A0A0B4J235 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC1.65□□□□□ -2.15
TRAV13-2A0A0B4J235 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC1.65□□□□□ -2.15
TRAV13-2A0A0B4J235 AC103810.1-201ENST00000579873 453 ntBASIC1.65□□□□□ -2.15
TRAV13-2A0A0B4J235 AL121917.1-203ENST00000605534 577 ntBASIC1.65□□□□□ -2.15
TRAV13-2A0A0B4J235 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC1.65□□□□□ -2.15
TRAV13-2A0A0B4J235 MIR6840-201ENST00000611937 71 ntBASIC1.65□□□□□ -2.15
TRAV13-2A0A0B4J235 U4.3-201ENST00000621047 82 ntBASIC1.65□□□□□ -2.15
TRAV13-2A0A0B4J235 AC095031.1-201ENST00000623685 672 ntBASIC1.65□□□□□ -2.15
TRAV13-2A0A0B4J235 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC1.65□□□□□ -2.15
TRAV13-2A0A0B4J235 AC110079.1-202ENST00000635213 138 ntBASIC1.65□□□□□ -2.15
TRAV13-2A0A0B4J235 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC1.65□□□□□ -2.15
TRAV13-2A0A0B4J235 CRYM-AS1-204ENST00000637983 556 ntBASIC1.65□□□□□ -2.15
TRAV13-2A0A0B4J235 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.15
TRAV13-2A0A0B4J235 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
TRAV13-2A0A0B4J235 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC1.64□□□□□ -2.15
TRAV13-2A0A0B4J235 CUL1P1-201ENST00000509510 2425 ntBASIC1.64□□□□□ -2.15
TRAV13-2A0A0B4J235 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
TRAV13-2A0A0B4J235 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
TRAV13-2A0A0B4J235 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
TRAV13-2A0A0B4J235 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
TRAV13-2A0A0B4J235 RNA5SP21-201ENST00000410917 96 ntBASIC1.64□□□□□ -2.15
TRAV13-2A0A0B4J235 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC1.64□□□□□ -2.15
TRAV13-2A0A0B4J235 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC1.64□□□□□ -2.15
TRAV13-2A0A0B4J235 MTND1P23-201ENST00000416931 372 ntBASIC1.64□□□□□ -2.15
TRAV13-2A0A0B4J235 FNDC3CP-201ENST00000420795 1155 ntBASIC1.64□□□□□ -2.15
TRAV13-2A0A0B4J235 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC1.64□□□□□ -2.15
TRAV13-2A0A0B4J235 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC1.64□□□□□ -2.15
TRAV13-2A0A0B4J235 AL031659.1-201ENST00000447075 539 ntBASIC1.64□□□□□ -2.15
TRAV13-2A0A0B4J235 DPPA3P1-201ENST00000448050 469 ntBASIC1.64□□□□□ -2.15
TRAV13-2A0A0B4J235 TEX41-209ENST00000451478 452 ntTSL 2 BASIC1.64□□□□□ -2.15
TRAV13-2A0A0B4J235 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC1.64□□□□□ -2.15
TRAV13-2A0A0B4J235 MTCYBP14-201ENST00000457471 715 ntBASIC1.64□□□□□ -2.15
TRAV13-2A0A0B4J235 AC113155.1-201ENST00000511141 769 ntBASIC1.64□□□□□ -2.15
TRAV13-2A0A0B4J235 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC1.64□□□□□ -2.15
TRAV13-2A0A0B4J235 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.64□□□□□ -2.15
TRAV13-2A0A0B4J235 TTC39CP1-201ENST00000512513 755 ntBASIC1.64□□□□□ -2.15
TRAV13-2A0A0B4J235 RNA5SP282-201ENST00000516355 108 ntBASIC1.64□□□□□ -2.15
TRAV13-2A0A0B4J235 SNORA31.21-201ENST00000517180 77 ntBASIC1.64□□□□□ -2.15
TRAV13-2A0A0B4J235 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC1.64□□□□□ -2.15
TRAV13-2A0A0B4J235 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC1.64□□□□□ -2.15
TRAV13-2A0A0B4J235 AC007954.1-201ENST00000554198 494 ntBASIC1.64□□□□□ -2.15
TRAV13-2A0A0B4J235 AC093227.2-201ENST00000589357 285 ntBASIC1.64□□□□□ -2.15
TRAV13-2A0A0B4J235 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.64□□□□□ -2.15
TRAV13-2A0A0B4J235 AC112503.2-201ENST00000609005 552 ntBASIC1.64□□□□□ -2.15
TRAV13-2A0A0B4J235 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC1.64□□□□□ -2.15
TRAV13-2A0A0B4J235 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
TRAV13-2A0A0B4J235 MTCO1P12-201ENST00000414273 1543 ntBASIC1.64□□□□□ -2.15
TRAV13-2A0A0B4J235 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC1.64□□□□□ -2.15
TRAV13-2A0A0B4J235 AL359893.1-201ENST00000447628 1580 ntBASIC1.64□□□□□ -2.15
TRAV13-2A0A0B4J235 AL355596.1-201ENST00000565399 3996 ntBASIC1.63□□□□□ -2.15
TRAV13-2A0A0B4J235 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
TRAV13-2A0A0B4J235 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
TRAV13-2A0A0B4J235 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.63□□□□□ -2.15
TRAV13-2A0A0B4J235 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC1.63□□□□□ -2.15
TRAV13-2A0A0B4J235 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
TRAV13-2A0A0B4J235 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.63□□□□□ -2.15
TRAV13-2A0A0B4J235 RNA5SP456-201ENST00000364002 114 ntBASIC1.63□□□□□ -2.15
TRAV13-2A0A0B4J235 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
TRAV13-2A0A0B4J235 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
TRAV13-2A0A0B4J235 MIR524-201ENST00000385242 87 ntBASIC1.63□□□□□ -2.15
TRAV13-2A0A0B4J235 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
TRAV13-2A0A0B4J235 RPS4XP3-201ENST00000398541 413 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms