Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb3Q91XZ7 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC16.39■□□□□ 0.21
Pcdhb3Q91XZ7 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb3Q91XZ7 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb3Q91XZ7 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb3Q91XZ7 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb3Q91XZ7 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb3Q91XZ7 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb3Q91XZ7 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb3Q91XZ7 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb3Q91XZ7 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb3Q91XZ7 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb3Q91XZ7 Gm15375-201ENSMUST00000119510 849 ntBASIC16.39■□□□□ 0.21
Pcdhb3Q91XZ7 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC16.39■□□□□ 0.21
Pcdhb3Q91XZ7 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC16.39■□□□□ 0.21
Pcdhb3Q91XZ7 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.39■□□□□ 0.21
Pcdhb3Q91XZ7 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb3Q91XZ7 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb3Q91XZ7 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb3Q91XZ7 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb3Q91XZ7 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb3Q91XZ7 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb3Q91XZ7 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb3Q91XZ7 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Pcdhb3Q91XZ7 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb3Q91XZ7 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb3Q91XZ7 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb3Q91XZ7 CT010444.2-201ENSMUST00000217877 1629 ntBASIC16.38■□□□□ 0.21
Pcdhb3Q91XZ7 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb3Q91XZ7 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb3Q91XZ7 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Pcdhb3Q91XZ7 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb3Q91XZ7 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb3Q91XZ7 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb3Q91XZ7 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb3Q91XZ7 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb3Q91XZ7 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
Pcdhb3Q91XZ7 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb3Q91XZ7 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb3Q91XZ7 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Pcdhb3Q91XZ7 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Pcdhb3Q91XZ7 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb3Q91XZ7 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Pcdhb3Q91XZ7 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb3Q91XZ7 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Pcdhb3Q91XZ7 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb3Q91XZ7 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb3Q91XZ7 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Pcdhb3Q91XZ7 Gm10584-201ENSMUST00000207036 2628 ntBASIC16.37■□□□□ 0.21
Pcdhb3Q91XZ7 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb3Q91XZ7 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb3Q91XZ7 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb3Q91XZ7 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC16.37■□□□□ 0.21
Pcdhb3Q91XZ7 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb3Q91XZ7 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb3Q91XZ7 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb3Q91XZ7 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb3Q91XZ7 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Pcdhb3Q91XZ7 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb3Q91XZ7 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb3Q91XZ7 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb3Q91XZ7 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
Pcdhb3Q91XZ7 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb3Q91XZ7 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb3Q91XZ7 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb3Q91XZ7 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb3Q91XZ7 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb3Q91XZ7 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Pcdhb3Q91XZ7 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb3Q91XZ7 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC16.36■□□□□ 0.21
Pcdhb3Q91XZ7 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb3Q91XZ7 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Pcdhb3Q91XZ7 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.36■□□□□ 0.21
Pcdhb3Q91XZ7 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Pcdhb3Q91XZ7 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb3Q91XZ7 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.36■□□□□ 0.21
Pcdhb3Q91XZ7 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb3Q91XZ7 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.36■□□□□ 0.21
Pcdhb3Q91XZ7 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC16.36■□□□□ 0.21
Pcdhb3Q91XZ7 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb3Q91XZ7 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb3Q91XZ7 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb3Q91XZ7 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb3Q91XZ7 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb3Q91XZ7 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb3Q91XZ7 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.36■□□□□ 0.21
Pcdhb3Q91XZ7 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb3Q91XZ7 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb3Q91XZ7 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb3Q91XZ7 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb3Q91XZ7 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb3Q91XZ7 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb3Q91XZ7 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb3Q91XZ7 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Pcdhb3Q91XZ7 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb3Q91XZ7 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb3Q91XZ7 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb3Q91XZ7 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb3Q91XZ7 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb3Q91XZ7 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms