Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Pcdh18Q8VHR0 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdh18Q8VHR0 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdh18Q8VHR0 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh18Q8VHR0 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.82■□□□□ 0.12
Pcdh18Q8VHR0 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh18Q8VHR0 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh18Q8VHR0 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh18Q8VHR0 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.82■□□□□ 0.12
Pcdh18Q8VHR0 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh18Q8VHR0 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Pcdh18Q8VHR0 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC15.82■□□□□ 0.12
Pcdh18Q8VHR0 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh18Q8VHR0 Gm12669-201ENSMUST00000122162 1009 ntBASIC15.82■□□□□ 0.12
Pcdh18Q8VHR0 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC15.82■□□□□ 0.12
Pcdh18Q8VHR0 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC15.82■□□□□ 0.12
Pcdh18Q8VHR0 AC135637.1-201ENSMUST00000227750 365 ntBASIC15.82■□□□□ 0.12
Pcdh18Q8VHR0 AC112142.1-201ENSMUST00000228796 918 ntBASIC15.82■□□□□ 0.12
Pcdh18Q8VHR0 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Pcdh18Q8VHR0 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh18Q8VHR0 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh18Q8VHR0 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh18Q8VHR0 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh18Q8VHR0 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh18Q8VHR0 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh18Q8VHR0 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh18Q8VHR0 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh18Q8VHR0 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Pcdh18Q8VHR0 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh18Q8VHR0 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh18Q8VHR0 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh18Q8VHR0 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh18Q8VHR0 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.82■□□□□ 0.12
Pcdh18Q8VHR0 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh18Q8VHR0 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh18Q8VHR0 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh18Q8VHR0 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh18Q8VHR0 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh18Q8VHR0 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh18Q8VHR0 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh18Q8VHR0 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh18Q8VHR0 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.81■□□□□ 0.12
Pcdh18Q8VHR0 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh18Q8VHR0 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC15.81■□□□□ 0.12
Pcdh18Q8VHR0 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh18Q8VHR0 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh18Q8VHR0 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh18Q8VHR0 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh18Q8VHR0 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh18Q8VHR0 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh18Q8VHR0 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh18Q8VHR0 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh18Q8VHR0 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Pcdh18Q8VHR0 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh18Q8VHR0 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh18Q8VHR0 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh18Q8VHR0 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Pcdh18Q8VHR0 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh18Q8VHR0 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh18Q8VHR0 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh18Q8VHR0 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh18Q8VHR0 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.8■□□□□ 0.12
Pcdh18Q8VHR0 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh18Q8VHR0 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.8■□□□□ 0.12
Pcdh18Q8VHR0 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.8■□□□□ 0.12
Pcdh18Q8VHR0 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Pcdh18Q8VHR0 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh18Q8VHR0 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh18Q8VHR0 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh18Q8VHR0 Gm10710-201ENSMUST00000047876 3971 ntBASIC15.8■□□□□ 0.12
Pcdh18Q8VHR0 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.8■□□□□ 0.12
Pcdh18Q8VHR0 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh18Q8VHR0 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh18Q8VHR0 Gm10517-202ENSMUST00000192970 758 ntBASIC15.8■□□□□ 0.12
Pcdh18Q8VHR0 Gm43183-201ENSMUST00000200632 547 ntBASIC15.8■□□□□ 0.12
Pcdh18Q8VHR0 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh18Q8VHR0 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh18Q8VHR0 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh18Q8VHR0 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh18Q8VHR0 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.8■□□□□ 0.12
Pcdh18Q8VHR0 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh18Q8VHR0 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh18Q8VHR0 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Pcdh18Q8VHR0 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh18Q8VHR0 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh18Q8VHR0 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh18Q8VHR0 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh18Q8VHR0 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh18Q8VHR0 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh18Q8VHR0 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh18Q8VHR0 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Pcdh18Q8VHR0 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh18Q8VHR0 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh18Q8VHR0 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh18Q8VHR0 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh18Q8VHR0 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Pcdh18Q8VHR0 Gm9694-201ENSMUST00000193347 1189 ntBASIC15.79■□□□□ 0.12
Pcdh18Q8VHR0 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC15.79■□□□□ 0.12
Pcdh18Q8VHR0 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh18Q8VHR0 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms