Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lsm1Q8VC85 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lsm1Q8VC85 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Lsm1Q8VC85 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Lsm1Q8VC85 Gm30025-201ENSMUST00000218555 728 ntBASIC15.7■□□□□ 0.1
Lsm1Q8VC85 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lsm1Q8VC85 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.7■□□□□ 0.1
Lsm1Q8VC85 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lsm1Q8VC85 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Lsm1Q8VC85 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Lsm1Q8VC85 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lsm1Q8VC85 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Lsm1Q8VC85 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lsm1Q8VC85 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lsm1Q8VC85 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Lsm1Q8VC85 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lsm1Q8VC85 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lsm1Q8VC85 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lsm1Q8VC85 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lsm1Q8VC85 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lsm1Q8VC85 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lsm1Q8VC85 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lsm1Q8VC85 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lsm1Q8VC85 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.69■□□□□ 0.1
Lsm1Q8VC85 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lsm1Q8VC85 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.69■□□□□ 0.1
Lsm1Q8VC85 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lsm1Q8VC85 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lsm1Q8VC85 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lsm1Q8VC85 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lsm1Q8VC85 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lsm1Q8VC85 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lsm1Q8VC85 Gm16061-201ENSMUST00000122167 857 ntBASIC15.69■□□□□ 0.1
Lsm1Q8VC85 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Lsm1Q8VC85 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC15.69■□□□□ 0.1
Lsm1Q8VC85 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC15.69■□□□□ 0.1
Lsm1Q8VC85 Gm29994-201ENSMUST00000195495 1193 ntBASIC15.69■□□□□ 0.1
Lsm1Q8VC85 Gm9484-201ENSMUST00000195892 1159 ntBASIC15.69■□□□□ 0.1
Lsm1Q8VC85 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lsm1Q8VC85 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lsm1Q8VC85 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lsm1Q8VC85 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lsm1Q8VC85 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lsm1Q8VC85 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Lsm1Q8VC85 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC15.69■□□□□ 0.1
Lsm1Q8VC85 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Lsm1Q8VC85 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.69■□□□□ 0.1
Lsm1Q8VC85 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lsm1Q8VC85 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lsm1Q8VC85 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lsm1Q8VC85 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Lsm1Q8VC85 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC15.69■□□□□ 0.1
Lsm1Q8VC85 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lsm1Q8VC85 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Lsm1Q8VC85 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Lsm1Q8VC85 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lsm1Q8VC85 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lsm1Q8VC85 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lsm1Q8VC85 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Lsm1Q8VC85 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lsm1Q8VC85 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
Lsm1Q8VC85 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lsm1Q8VC85 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lsm1Q8VC85 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lsm1Q8VC85 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Lsm1Q8VC85 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Lsm1Q8VC85 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lsm1Q8VC85 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Lsm1Q8VC85 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Lsm1Q8VC85 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lsm1Q8VC85 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Lsm1Q8VC85 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
Lsm1Q8VC85 Gm13474-201ENSMUST00000122466 815 ntBASIC15.68■□□□□ 0.1
Lsm1Q8VC85 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Lsm1Q8VC85 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Lsm1Q8VC85 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Lsm1Q8VC85 Gm2274-201ENSMUST00000184539 609 ntBASIC15.68■□□□□ 0.1
Lsm1Q8VC85 Gm18421-201ENSMUST00000204122 625 ntBASIC15.68■□□□□ 0.1
Lsm1Q8VC85 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
Lsm1Q8VC85 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lsm1Q8VC85 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Lsm1Q8VC85 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Lsm1Q8VC85 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Lsm1Q8VC85 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lsm1Q8VC85 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lsm1Q8VC85 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lsm1Q8VC85 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Lsm1Q8VC85 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC15.68■□□□□ 0.1
Lsm1Q8VC85 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC15.68■□□□□ 0.1
Lsm1Q8VC85 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.68■□□□□ 0.1
Lsm1Q8VC85 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lsm1Q8VC85 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.68■□□□□ 0.1
Lsm1Q8VC85 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC15.68■□□□□ 0.1
Lsm1Q8VC85 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lsm1Q8VC85 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lsm1Q8VC85 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Lsm1Q8VC85 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lsm1Q8VC85 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lsm1Q8VC85 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.67■□□□□ 0.1
Lsm1Q8VC85 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms