Protein–RNA interactions for Protein: Q61136

Prpf4b, Serine/threonine-protein kinase PRP4 homolog, mousemouse

Known RBP Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf4bQ61136 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Prpf4bQ61136 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Prpf4bQ61136 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Prpf4bQ61136 Gfra2-202ENSMUST00000227633 1480 ntBASIC18.77■□□□□ 0.6
Prpf4bQ61136 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Prpf4bQ61136 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Prpf4bQ61136 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Prpf4bQ61136 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Prpf4bQ61136 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Prpf4bQ61136 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Prpf4bQ61136 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Prpf4bQ61136 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Prpf4bQ61136 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Prpf4bQ61136 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Prpf4bQ61136 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Prpf4bQ61136 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Prpf4bQ61136 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Prpf4bQ61136 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Prpf4bQ61136 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Prpf4bQ61136 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Prpf4bQ61136 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Prpf4bQ61136 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Prpf4bQ61136 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC18.76■□□□□ 0.59
Prpf4bQ61136 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC18.76■□□□□ 0.59
Prpf4bQ61136 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Prpf4bQ61136 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
Prpf4bQ61136 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Prpf4bQ61136 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prpf4bQ61136 Gm7977-201ENSMUST00000193787 748 ntBASIC18.76■□□□□ 0.59
Prpf4bQ61136 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.76■□□□□ 0.59
Prpf4bQ61136 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prpf4bQ61136 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prpf4bQ61136 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC18.76■□□□□ 0.59
Prpf4bQ61136 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prpf4bQ61136 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC18.76■□□□□ 0.59
Prpf4bQ61136 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
Prpf4bQ61136 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Prpf4bQ61136 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Prpf4bQ61136 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Prpf4bQ61136 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Prpf4bQ61136 Gm6190-201ENSMUST00000220683 1374 ntBASIC18.75■□□□□ 0.59
Prpf4bQ61136 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Prpf4bQ61136 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Prpf4bQ61136 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC18.75■□□□□ 0.59
Prpf4bQ61136 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Prpf4bQ61136 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC18.75■□□□□ 0.59
Prpf4bQ61136 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Prpf4bQ61136 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Prpf4bQ61136 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Prpf4bQ61136 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC18.74■□□□□ 0.59
Prpf4bQ61136 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Prpf4bQ61136 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Prpf4bQ61136 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Prpf4bQ61136 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Prpf4bQ61136 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
Prpf4bQ61136 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Prpf4bQ61136 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Prpf4bQ61136 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Prpf4bQ61136 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Prpf4bQ61136 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Prpf4bQ61136 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Prpf4bQ61136 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Prpf4bQ61136 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Prpf4bQ61136 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Prpf4bQ61136 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Prpf4bQ61136 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Prpf4bQ61136 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Prpf4bQ61136 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Prpf4bQ61136 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Prpf4bQ61136 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Prpf4bQ61136 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Prpf4bQ61136 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Prpf4bQ61136 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Prpf4bQ61136 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Prpf4bQ61136 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.73■□□□□ 0.59
Prpf4bQ61136 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Prpf4bQ61136 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
Prpf4bQ61136 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Prpf4bQ61136 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Prpf4bQ61136 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Prpf4bQ61136 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Prpf4bQ61136 Gm45058-201ENSMUST00000205810 766 ntBASIC18.73■□□□□ 0.59
Prpf4bQ61136 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Prpf4bQ61136 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Prpf4bQ61136 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Prpf4bQ61136 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Prpf4bQ61136 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Prpf4bQ61136 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Prpf4bQ61136 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC18.73■□□□□ 0.59
Prpf4bQ61136 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Prpf4bQ61136 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Prpf4bQ61136 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Prpf4bQ61136 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.72■□□□□ 0.59
Prpf4bQ61136 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.72■□□□□ 0.59
Prpf4bQ61136 Mir5130-201ENSMUST00000175160 84 ntBASIC18.72■□□□□ 0.59
Prpf4bQ61136 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Prpf4bQ61136 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Prpf4bQ61136 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Prpf4bQ61136 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC18.72■□□□□ 0.59
Prpf4bQ61136 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms