Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LRRK2Q5S007 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRRK2Q5S007 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LRRK2Q5S007 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
LRRK2Q5S007 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRRK2Q5S007 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LRRK2Q5S007 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.67■□□□□ 0.26
LRRK2Q5S007 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRRK2Q5S007 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LRRK2Q5S007 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRRK2Q5S007 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.67■□□□□ 0.26
LRRK2Q5S007 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.67■□□□□ 0.26
LRRK2Q5S007 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRRK2Q5S007 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
LRRK2Q5S007 AC018712.1-201ENST00000455767 687 ntBASIC16.67■□□□□ 0.26
LRRK2Q5S007 RPL13AP23-201ENST00000480739 586 ntBASIC16.67■□□□□ 0.26
LRRK2Q5S007 AC073648.2-201ENST00000510116 352 ntBASIC16.67■□□□□ 0.26
LRRK2Q5S007 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.67■□□□□ 0.26
LRRK2Q5S007 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
LRRK2Q5S007 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
LRRK2Q5S007 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.67■□□□□ 0.26
LRRK2Q5S007 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC16.67■□□□□ 0.26
LRRK2Q5S007 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRRK2Q5S007 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.67■□□□□ 0.26
LRRK2Q5S007 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.67■□□□□ 0.26
LRRK2Q5S007 AC083906.6-201ENST00000641366 219 ntBASIC16.67■□□□□ 0.26
LRRK2Q5S007 AC079781.4-201ENST00000641908 219 ntBASIC16.67■□□□□ 0.26
LRRK2Q5S007 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRRK2Q5S007 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LRRK2Q5S007 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
LRRK2Q5S007 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRK2Q5S007 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.66■□□□□ 0.26
LRRK2Q5S007 MIR3197-201ENST00000582241 73 ntBASIC16.66■□□□□ 0.26
LRRK2Q5S007 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.66■□□□□ 0.26
LRRK2Q5S007 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.66■□□□□ 0.26
LRRK2Q5S007 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LRRK2Q5S007 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
LRRK2Q5S007 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LRRK2Q5S007 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.66■□□□□ 0.26
LRRK2Q5S007 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRK2Q5S007 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRK2Q5S007 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRK2Q5S007 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LRRK2Q5S007 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRK2Q5S007 GPAT2P1-201ENST00000444924 1672 ntBASIC16.66■□□□□ 0.26
LRRK2Q5S007 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRK2Q5S007 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC16.66■□□□□ 0.26
LRRK2Q5S007 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LRRK2Q5S007 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRK2Q5S007 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.66■□□□□ 0.26
LRRK2Q5S007 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRK2Q5S007 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC16.66■□□□□ 0.26
LRRK2Q5S007 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRK2Q5S007 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRK2Q5S007 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC16.66■□□□□ 0.26
LRRK2Q5S007 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LRRK2Q5S007 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.65■□□□□ 0.26
LRRK2Q5S007 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRK2Q5S007 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRK2Q5S007 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LRRK2Q5S007 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LRRK2Q5S007 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.65■□□□□ 0.26
LRRK2Q5S007 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.65■□□□□ 0.26
LRRK2Q5S007 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.65■□□□□ 0.26
LRRK2Q5S007 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.65■□□□□ 0.26
LRRK2Q5S007 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
LRRK2Q5S007 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
LRRK2Q5S007 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LRRK2Q5S007 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
LRRK2Q5S007 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LRRK2Q5S007 RPSAP43-201ENST00000402237 625 ntBASIC16.65■□□□□ 0.26
LRRK2Q5S007 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LRRK2Q5S007 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.65■□□□□ 0.26
LRRK2Q5S007 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.65■□□□□ 0.26
LRRK2Q5S007 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
LRRK2Q5S007 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.65■□□□□ 0.26
LRRK2Q5S007 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.65■□□□□ 0.26
LRRK2Q5S007 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRK2Q5S007 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.65■□□□□ 0.26
LRRK2Q5S007 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRK2Q5S007 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRK2Q5S007 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC16.64■□□□□ 0.26
LRRK2Q5S007 GPX1P2-201ENST00000429271 606 ntBASIC16.64■□□□□ 0.25
LRRK2Q5S007 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRK2Q5S007 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.64■□□□□ 0.25
LRRK2Q5S007 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.64■□□□□ 0.25
LRRK2Q5S007 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.64■□□□□ 0.25
LRRK2Q5S007 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.64■□□□□ 0.25
LRRK2Q5S007 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.64■□□□□ 0.25
LRRK2Q5S007 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRK2Q5S007 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC16.64■□□□□ 0.25
LRRK2Q5S007 TUB-203ENST00000534099 1759 ntTSL 2 BASIC16.64■□□□□ 0.25
LRRK2Q5S007 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRK2Q5S007 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.64■□□□□ 0.25
LRRK2Q5S007 IGHV3-47-201ENST00000425060 335 ntBASIC16.64■□□□□ 0.25
LRRK2Q5S007 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.64■□□□□ 0.25
LRRK2Q5S007 IGHV3-22-201ENST00000520721 359 ntBASIC16.64■□□□□ 0.25
LRRK2Q5S007 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.64■□□□□ 0.25
LRRK2Q5S007 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LRRK2Q5S007 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms