Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Tpm1P58771 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tpm1P58771 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC18.32■□□□□ 0.52
Tpm1P58771 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tpm1P58771 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tpm1P58771 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Tpm1P58771 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Tpm1P58771 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tpm1P58771 Gm45212-201ENSMUST00000205831 3403 ntBASIC18.32■□□□□ 0.52
Tpm1P58771 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Tpm1P58771 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
Tpm1P58771 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Tpm1P58771 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tpm1P58771 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tpm1P58771 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tpm1P58771 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tpm1P58771 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
Tpm1P58771 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Tpm1P58771 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tpm1P58771 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tpm1P58771 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tpm1P58771 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Tpm1P58771 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Tpm1P58771 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Tpm1P58771 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tpm1P58771 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Tpm1P58771 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC18.31■□□□□ 0.52
Tpm1P58771 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tpm1P58771 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.31■□□□□ 0.52
Tpm1P58771 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Tpm1P58771 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Tpm1P58771 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC18.31■□□□□ 0.52
Tpm1P58771 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Tpm1P58771 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Tpm1P58771 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
Tpm1P58771 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tpm1P58771 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tpm1P58771 Gm43072-201ENSMUST00000200283 1671 ntBASIC18.31■□□□□ 0.52
Tpm1P58771 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Tpm1P58771 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tpm1P58771 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tpm1P58771 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tpm1P58771 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tpm1P58771 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tpm1P58771 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tpm1P58771 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tpm1P58771 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Tpm1P58771 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tpm1P58771 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tpm1P58771 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Tpm1P58771 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Tpm1P58771 Gm37179-201ENSMUST00000194862 823 ntBASIC18.3■□□□□ 0.52
Tpm1P58771 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.3■□□□□ 0.52
Tpm1P58771 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tpm1P58771 Gm10602-201ENSMUST00000098239 609 ntBASIC18.3■□□□□ 0.52
Tpm1P58771 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tpm1P58771 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tpm1P58771 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tpm1P58771 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.3■□□□□ 0.52
Tpm1P58771 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tpm1P58771 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tpm1P58771 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Tpm1P58771 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
Tpm1P58771 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC18.29■□□□□ 0.52
Tpm1P58771 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tpm1P58771 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Tpm1P58771 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tpm1P58771 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.29■□□□□ 0.52
Tpm1P58771 Gm18666-201ENSMUST00000190039 958 ntBASIC18.29■□□□□ 0.52
Tpm1P58771 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Tpm1P58771 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tpm1P58771 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tpm1P58771 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Tpm1P58771 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Tpm1P58771 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tpm1P58771 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tpm1P58771 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tpm1P58771 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Tpm1P58771 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
Tpm1P58771 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tpm1P58771 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Tpm1P58771 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tpm1P58771 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tpm1P58771 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Tpm1P58771 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tpm1P58771 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
Tpm1P58771 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tpm1P58771 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.28■□□□□ 0.52
Tpm1P58771 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.28■□□□□ 0.52
Tpm1P58771 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tpm1P58771 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Tpm1P58771 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Tpm1P58771 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tpm1P58771 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tpm1P58771 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Tpm1P58771 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
Tpm1P58771 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC18.28■□□□□ 0.52
Tpm1P58771 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tpm1P58771 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
Tpm1P58771 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms