Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sdc2P43407 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
Sdc2P43407 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.38■□□□□ 0.53
Sdc2P43407 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC18.38■□□□□ 0.53
Sdc2P43407 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sdc2P43407 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Sdc2P43407 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sdc2P43407 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sdc2P43407 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sdc2P43407 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sdc2P43407 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC18.38■□□□□ 0.53
Sdc2P43407 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sdc2P43407 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sdc2P43407 Zkscan3-208ENSMUST00000224820 5398 ntBASIC18.37■□□□□ 0.53
Sdc2P43407 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Sdc2P43407 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Sdc2P43407 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sdc2P43407 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sdc2P43407 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sdc2P43407 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sdc2P43407 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
Sdc2P43407 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sdc2P43407 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sdc2P43407 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sdc2P43407 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Sdc2P43407 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC18.37■□□□□ 0.53
Sdc2P43407 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.37■□□□□ 0.53
Sdc2P43407 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sdc2P43407 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC18.37■□□□□ 0.53
Sdc2P43407 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.37■□□□□ 0.53
Sdc2P43407 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Sdc2P43407 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Sdc2P43407 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.37■□□□□ 0.53
Sdc2P43407 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sdc2P43407 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sdc2P43407 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sdc2P43407 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Sdc2P43407 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sdc2P43407 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sdc2P43407 Gm43072-201ENSMUST00000200283 1671 ntBASIC18.37■□□□□ 0.53
Sdc2P43407 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sdc2P43407 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sdc2P43407 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sdc2P43407 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sdc2P43407 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sdc2P43407 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sdc2P43407 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sdc2P43407 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sdc2P43407 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sdc2P43407 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sdc2P43407 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sdc2P43407 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sdc2P43407 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
Sdc2P43407 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
Sdc2P43407 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Sdc2P43407 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC18.36■□□□□ 0.53
Sdc2P43407 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sdc2P43407 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC18.36■□□□□ 0.53
Sdc2P43407 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sdc2P43407 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Sdc2P43407 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sdc2P43407 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC18.36■□□□□ 0.53
Sdc2P43407 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Sdc2P43407 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sdc2P43407 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Sdc2P43407 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Sdc2P43407 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sdc2P43407 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC18.35■□□□□ 0.53
Sdc2P43407 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sdc2P43407 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Sdc2P43407 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sdc2P43407 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC18.35■□□□□ 0.53
Sdc2P43407 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sdc2P43407 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sdc2P43407 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Sdc2P43407 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sdc2P43407 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Sdc2P43407 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
Sdc2P43407 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sdc2P43407 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sdc2P43407 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Sdc2P43407 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.35■□□□□ 0.53
Sdc2P43407 Gm30025-201ENSMUST00000218555 728 ntBASIC18.35■□□□□ 0.53
Sdc2P43407 Gm18115-201ENSMUST00000221209 621 ntBASIC18.35■□□□□ 0.53
Sdc2P43407 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sdc2P43407 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Sdc2P43407 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Sdc2P43407 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC18.35■□□□□ 0.53
Sdc2P43407 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sdc2P43407 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Sdc2P43407 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC18.35■□□□□ 0.53
Sdc2P43407 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
Sdc2P43407 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sdc2P43407 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sdc2P43407 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sdc2P43407 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sdc2P43407 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sdc2P43407 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sdc2P43407 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC18.34■□□□□ 0.53
Sdc2P43407 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms