Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 TSPY22P-201ENST00000427496 604 ntBASIC21.63■■□□□ 1.05
HTTP42858 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
HTTP42858 KRT18P58-201ENST00000527480 1120 ntBASIC21.63■■□□□ 1.05
HTTP42858 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC21.63■■□□□ 1.05
HTTP42858 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
HTTP42858 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HTTP42858 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.63■■□□□ 1.05
HTTP42858 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
HTTP42858 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
HTTP42858 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC21.63■■□□□ 1.05
HTTP42858 AC092865.5-201ENST00000545435 363 ntBASIC21.63■■□□□ 1.05
HTTP42858 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HTTP42858 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
HTTP42858 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HTTP42858 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC21.63■■□□□ 1.05
HTTP42858 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
HTTP42858 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC21.63■■□□□ 1.05
HTTP42858 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC21.63■■□□□ 1.05
HTTP42858 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
HTTP42858 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.62■■□□□ 1.05
HTTP42858 LSM5-204ENST00000409909 740 ntTSL 2 BASIC21.62■■□□□ 1.05
HTTP42858 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
HTTP42858 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC21.62■■□□□ 1.05
HTTP42858 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.62■■□□□ 1.05
HTTP42858 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC21.62■■□□□ 1.05
HTTP42858 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
HTTP42858 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
HTTP42858 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
HTTP42858 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC21.62■■□□□ 1.05
HTTP42858 AC079602.3-201ENST00000623931 403 ntBASIC21.62■■□□□ 1.05
HTTP42858 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC21.62■■□□□ 1.05
HTTP42858 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC21.62■■□□□ 1.05
HTTP42858 MOK-225ENST00000522867 1883 ntTSL 5 BASIC21.62■■□□□ 1.05
HTTP42858 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
HTTP42858 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
HTTP42858 BX842568.4-201ENST00000421222 227 ntBASIC21.62■■□□□ 1.05
HTTP42858 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC21.62■■□□□ 1.05
HTTP42858 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC21.62■■□□□ 1.05
HTTP42858 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
HTTP42858 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.61■■□□□ 1.05
HTTP42858 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
HTTP42858 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
HTTP42858 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC21.61■■□□□ 1.05
HTTP42858 DFFB-203ENST00000341385 572 ntTSL 5 BASIC21.61■■□□□ 1.05
HTTP42858 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HTTP42858 ABR-204ENST00000543210 1049 ntTSL 2 BASIC21.61■■□□□ 1.05
HTTP42858 AL121772.3-201ENST00000610840 674 ntBASIC21.61■■□□□ 1.05
HTTP42858 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.61■■□□□ 1.05
HTTP42858 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
HTTP42858 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HTTP42858 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HTTP42858 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.61■■□□□ 1.05
HTTP42858 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HTTP42858 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
HTTP42858 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC21.61■■□□□ 1.05
HTTP42858 KRT16P6-202ENST00000425692 1426 ntBASIC21.61■■□□□ 1.05
HTTP42858 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
HTTP42858 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC21.61■■□□□ 1.05
HTTP42858 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
HTTP42858 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.61■■□□□ 1.05
HTTP42858 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC21.6■■□□□ 1.05
HTTP42858 RNF126P1-202ENST00000569893 925 ntBASIC21.6■■□□□ 1.05
HTTP42858 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC21.6■■□□□ 1.05
HTTP42858 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC21.6■■□□□ 1.05
HTTP42858 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
HTTP42858 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HTTP42858 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
HTTP42858 TLE1-202ENST00000376484 666 ntTSL 3 BASIC21.6■■□□□ 1.05
HTTP42858 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC21.6■■□□□ 1.05
HTTP42858 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC21.6■■□□□ 1.05
HTTP42858 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC21.6■■□□□ 1.05
HTTP42858 SPEG-225ENST00000617028 815 ntTSL 5 BASIC21.6■■□□□ 1.05
HTTP42858 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
HTTP42858 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HTTP42858 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HTTP42858 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
HTTP42858 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HTTP42858 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC21.6■■□□□ 1.05
HTTP42858 LINC00265-3P-201ENST00000447588 903 ntBASIC21.6■■□□□ 1.05
HTTP42858 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC21.6■■□□□ 1.05
HTTP42858 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
HTTP42858 AC024243.1-201ENST00000609234 778 ntBASIC21.6■■□□□ 1.05
HTTP42858 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HTTP42858 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HTTP42858 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC21.59■■□□□ 1.05
HTTP42858 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HTTP42858 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC21.59■■□□□ 1.05
HTTP42858 AL773604.1-201ENST00000617417 272 ntBASIC21.59■■□□□ 1.05
HTTP42858 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.59■■□□□ 1.05
HTTP42858 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HTTP42858 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
HTTP42858 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HTTP42858 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
HTTP42858 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HTTP42858 Z83836.1-201ENST00000624605 1642 ntBASIC21.59■■□□□ 1.05
HTTP42858 AC007225.1-201ENST00000566331 1836 ntBASIC21.59■■□□□ 1.05
HTTP42858 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HTTP42858 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.59■■□□□ 1.05
HTTP42858 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
HTTP42858 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms