Protein–RNA interactions for Protein: O54689

Ccr6, C-C chemokine receptor type 6, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr6O54689 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
Ccr6O54689 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccr6O54689 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Ccr6O54689 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccr6O54689 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccr6O54689 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccr6O54689 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ccr6O54689 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccr6O54689 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
Ccr6O54689 AC099934.2-201ENSMUST00000196389 70 ntBASIC13.79□□□□□ -0.2
Ccr6O54689 AC156953.1-201ENSMUST00000196953 70 ntBASIC13.79□□□□□ -0.2
Ccr6O54689 AC157822.2-201ENSMUST00000200291 70 ntBASIC13.79□□□□□ -0.2
Ccr6O54689 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC13.79□□□□□ -0.2
Ccr6O54689 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccr6O54689 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccr6O54689 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccr6O54689 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccr6O54689 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccr6O54689 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ccr6O54689 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ccr6O54689 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccr6O54689 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC13.78□□□□□ -0.2
Ccr6O54689 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Ccr6O54689 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccr6O54689 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccr6O54689 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ccr6O54689 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ccr6O54689 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC13.78□□□□□ -0.2
Ccr6O54689 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccr6O54689 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC13.78□□□□□ -0.2
Ccr6O54689 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Ccr6O54689 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccr6O54689 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccr6O54689 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Ccr6O54689 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccr6O54689 Gm26524-201ENSMUST00000192339 390 ntBASIC13.78□□□□□ -0.2
Ccr6O54689 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC13.78□□□□□ -0.2
Ccr6O54689 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC13.78□□□□□ -0.2
Ccr6O54689 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccr6O54689 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Ccr6O54689 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccr6O54689 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccr6O54689 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ccr6O54689 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccr6O54689 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC13.78□□□□□ -0.2
Ccr6O54689 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccr6O54689 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccr6O54689 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccr6O54689 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Ccr6O54689 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Ccr6O54689 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccr6O54689 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccr6O54689 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ccr6O54689 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ccr6O54689 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ccr6O54689 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ccr6O54689 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccr6O54689 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccr6O54689 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Ccr6O54689 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccr6O54689 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Ccr6O54689 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ccr6O54689 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccr6O54689 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccr6O54689 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC13.77□□□□□ -0.21
Ccr6O54689 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC13.77□□□□□ -0.21
Ccr6O54689 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccr6O54689 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccr6O54689 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ccr6O54689 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccr6O54689 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccr6O54689 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Ccr6O54689 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC13.77□□□□□ -0.21
Ccr6O54689 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ccr6O54689 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Ccr6O54689 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccr6O54689 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccr6O54689 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccr6O54689 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccr6O54689 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
Ccr6O54689 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ccr6O54689 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccr6O54689 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccr6O54689 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccr6O54689 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccr6O54689 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Ccr6O54689 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccr6O54689 Wnt10b-204ENSMUST00000226655 1807 ntBASIC13.76□□□□□ -0.21
Ccr6O54689 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Ccr6O54689 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccr6O54689 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccr6O54689 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Ccr6O54689 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccr6O54689 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Ccr6O54689 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccr6O54689 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC13.76□□□□□ -0.21
Ccr6O54689 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ccr6O54689 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ccr6O54689 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccr6O54689 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms