Protein–RNA interactions for Protein: A0A0A6YY41

Ighv1-47, Immunoglobulin heavy variable 1-47 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-47A0A0A6YY41 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ighv1-47A0A0A6YY41 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ighv1-47A0A0A6YY41 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ighv1-47A0A0A6YY41 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ighv1-47A0A0A6YY41 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ighv1-47A0A0A6YY41 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ighv1-47A0A0A6YY41 AC093043.3-201ENSMUST00000226531 2273 ntBASIC13.54□□□□□ -0.24
Ighv1-47A0A0A6YY41 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ighv1-47A0A0A6YY41 Gm2274-201ENSMUST00000184539 609 ntBASIC13.54□□□□□ -0.24
Ighv1-47A0A0A6YY41 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ighv1-47A0A0A6YY41 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ighv1-47A0A0A6YY41 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ighv1-47A0A0A6YY41 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ighv1-47A0A0A6YY41 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ighv1-47A0A0A6YY41 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ighv1-47A0A0A6YY41 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ighv1-47A0A0A6YY41 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Ighv1-47A0A0A6YY41 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ighv1-47A0A0A6YY41 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-47A0A0A6YY41 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC13.53□□□□□ -0.24
Ighv1-47A0A0A6YY41 Gm44616-201ENSMUST00000206417 1732 ntBASIC13.53□□□□□ -0.24
Ighv1-47A0A0A6YY41 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-47A0A0A6YY41 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC13.53□□□□□ -0.24
Ighv1-47A0A0A6YY41 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Ighv1-47A0A0A6YY41 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-47A0A0A6YY41 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-47A0A0A6YY41 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-47A0A0A6YY41 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-47A0A0A6YY41 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC13.53□□□□□ -0.24
Ighv1-47A0A0A6YY41 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-47A0A0A6YY41 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC13.53□□□□□ -0.24
Ighv1-47A0A0A6YY41 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-47A0A0A6YY41 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-47A0A0A6YY41 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Ighv1-47A0A0A6YY41 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-47A0A0A6YY41 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-47A0A0A6YY41 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-47A0A0A6YY41 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-47A0A0A6YY41 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC13.53□□□□□ -0.24
Ighv1-47A0A0A6YY41 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-47A0A0A6YY41 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-47A0A0A6YY41 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-47A0A0A6YY41 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-47A0A0A6YY41 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Ighv1-47A0A0A6YY41 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-47A0A0A6YY41 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-47A0A0A6YY41 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-47A0A0A6YY41 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-47A0A0A6YY41 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC13.53□□□□□ -0.24
Ighv1-47A0A0A6YY41 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-47A0A0A6YY41 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-47A0A0A6YY41 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Ighv1-47A0A0A6YY41 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-47A0A0A6YY41 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ighv1-47A0A0A6YY41 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC13.52□□□□□ -0.24
Ighv1-47A0A0A6YY41 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC13.52□□□□□ -0.24
Ighv1-47A0A0A6YY41 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ighv1-47A0A0A6YY41 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ighv1-47A0A0A6YY41 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ighv1-47A0A0A6YY41 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Ighv1-47A0A0A6YY41 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC13.52□□□□□ -0.25
Ighv1-47A0A0A6YY41 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ighv1-47A0A0A6YY41 Gm20472-201ENSMUST00000174403 1240 ntBASIC13.52□□□□□ -0.25
Ighv1-47A0A0A6YY41 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ighv1-47A0A0A6YY41 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ighv1-47A0A0A6YY41 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ighv1-47A0A0A6YY41 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ighv1-47A0A0A6YY41 Zkscan3-208ENSMUST00000224820 5398 ntBASIC13.52□□□□□ -0.25
Ighv1-47A0A0A6YY41 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Ighv1-47A0A0A6YY41 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ighv1-47A0A0A6YY41 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ighv1-47A0A0A6YY41 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC13.52□□□□□ -0.25
Ighv1-47A0A0A6YY41 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Ighv1-47A0A0A6YY41 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ighv1-47A0A0A6YY41 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Ighv1-47A0A0A6YY41 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ighv1-47A0A0A6YY41 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC13.52□□□□□ -0.25
Ighv1-47A0A0A6YY41 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ighv1-47A0A0A6YY41 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ighv1-47A0A0A6YY41 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ighv1-47A0A0A6YY41 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ighv1-47A0A0A6YY41 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ighv1-47A0A0A6YY41 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ighv1-47A0A0A6YY41 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ighv1-47A0A0A6YY41 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ighv1-47A0A0A6YY41 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ighv1-47A0A0A6YY41 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Ighv1-47A0A0A6YY41 AC154855.1-201ENSMUST00000227353 1458 ntBASIC13.51□□□□□ -0.25
Ighv1-47A0A0A6YY41 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
Ighv1-47A0A0A6YY41 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ighv1-47A0A0A6YY41 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC13.51□□□□□ -0.25
Ighv1-47A0A0A6YY41 Gm13474-201ENSMUST00000122466 815 ntBASIC13.51□□□□□ -0.25
Ighv1-47A0A0A6YY41 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC13.51□□□□□ -0.25
Ighv1-47A0A0A6YY41 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC13.51□□□□□ -0.25
Ighv1-47A0A0A6YY41 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC13.51□□□□□ -0.25
Ighv1-47A0A0A6YY41 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC13.51□□□□□ -0.25
Ighv1-47A0A0A6YY41 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ighv1-47A0A0A6YY41 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ighv1-47A0A0A6YY41 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Ighv1-47A0A0A6YY41 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms