Protein–RNA interactions for Protein: Q9UQE7

SMC3, Structural maintenance of chromosomes protein 3, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3Q9UQE7 AP002906.1-201ENST00000603405 233 ntBASIC3.61□□□□□ -1.83
SMC3Q9UQE7 AP004247.3-201ENST00000608682 624 ntBASIC3.61□□□□□ -1.83
SMC3Q9UQE7 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
SMC3Q9UQE7 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.61□□□□□ -1.83
SMC3Q9UQE7 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.61□□□□□ -1.83
SMC3Q9UQE7 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
SMC3Q9UQE7 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.61□□□□□ -1.83
SMC3Q9UQE7 AC090897.3-201ENST00000636973 1157 ntBASIC3.61□□□□□ -1.83
SMC3Q9UQE7 MTND5P19-201ENST00000424872 1794 ntBASIC3.61□□□□□ -1.83
SMC3Q9UQE7 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.61□□□□□ -1.83
SMC3Q9UQE7 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.6□□□□□ -1.83
SMC3Q9UQE7 Y_RNA.126-201ENST00000363382 111 ntBASIC3.6□□□□□ -1.83
SMC3Q9UQE7 SNORD15B-201ENST00000384714 146 ntBASIC3.6□□□□□ -1.83
SMC3Q9UQE7 TAF9BP1-201ENST00000396646 746 ntBASIC3.6□□□□□ -1.83
SMC3Q9UQE7 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
SMC3Q9UQE7 RPS7P15-201ENST00000415804 584 ntBASIC3.6□□□□□ -1.83
SMC3Q9UQE7 AC009237.2-201ENST00000421358 284 ntBASIC3.6□□□□□ -1.83
SMC3Q9UQE7 RPP40P1-201ENST00000426762 456 ntBASIC3.6□□□□□ -1.83
SMC3Q9UQE7 AC097713.2-201ENST00000430199 356 ntBASIC3.6□□□□□ -1.83
SMC3Q9UQE7 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC3.6□□□□□ -1.83
SMC3Q9UQE7 KCTD10P1-201ENST00000434203 625 ntBASIC3.6□□□□□ -1.83
SMC3Q9UQE7 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC3.6□□□□□ -1.83
SMC3Q9UQE7 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.6□□□□□ -1.83
SMC3Q9UQE7 AC010301.1-201ENST00000473936 355 ntBASIC3.6□□□□□ -1.83
SMC3Q9UQE7 RN7SL283P-201ENST00000489055 303 ntBASIC3.6□□□□□ -1.83
SMC3Q9UQE7 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SMC3Q9UQE7 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC3.6□□□□□ -1.83
SMC3Q9UQE7 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
SMC3Q9UQE7 AC111000.2-201ENST00000507775 550 ntBASIC3.6□□□□□ -1.83
SMC3Q9UQE7 MTCYBP37-201ENST00000510642 1133 ntBASIC3.6□□□□□ -1.83
SMC3Q9UQE7 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.6□□□□□ -1.83
SMC3Q9UQE7 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
SMC3Q9UQE7 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC3.6□□□□□ -1.83
SMC3Q9UQE7 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.6□□□□□ -1.83
SMC3Q9UQE7 MTATP6P2-201ENST00000603319 678 ntBASIC3.6□□□□□ -1.83
SMC3Q9UQE7 BNIP3P19-201ENST00000605397 577 ntBASIC3.6□□□□□ -1.83
SMC3Q9UQE7 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.6□□□□□ -1.83
SMC3Q9UQE7 AC138932.5-201ENST00000617759 563 ntBASIC3.6□□□□□ -1.83
SMC3Q9UQE7 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.6□□□□□ -1.83
SMC3Q9UQE7 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.6□□□□□ -1.83
SMC3Q9UQE7 AC022509.4-201ENST00000621404 572 ntBASIC3.6□□□□□ -1.83
SMC3Q9UQE7 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.6□□□□□ -1.83
SMC3Q9UQE7 AC093875.1-201ENST00000623688 504 ntBASIC3.6□□□□□ -1.83
SMC3Q9UQE7 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SMC3Q9UQE7 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC3.6□□□□□ -1.83
SMC3Q9UQE7 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.6□□□□□ -1.83
SMC3Q9UQE7 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
SMC3Q9UQE7 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SMC3Q9UQE7 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
SMC3Q9UQE7 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.59□□□□□ -1.83
SMC3Q9UQE7 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
SMC3Q9UQE7 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SMC3Q9UQE7 RNU1-85P-201ENST00000364127 164 ntBASIC3.59□□□□□ -1.83
SMC3Q9UQE7 SNORA62.3-201ENST00000365110 153 ntBASIC3.59□□□□□ -1.83
SMC3Q9UQE7 U8.9-201ENST00000365667 134 ntBASIC3.59□□□□□ -1.83
SMC3Q9UQE7 RNU6-354P-201ENST00000383862 107 ntBASIC3.59□□□□□ -1.83
SMC3Q9UQE7 RNU6-610P-201ENST00000384264 107 ntBASIC3.59□□□□□ -1.83
SMC3Q9UQE7 MIR134-201ENST00000385258 73 ntBASIC3.59□□□□□ -1.83
SMC3Q9UQE7 SNORD67-201ENST00000390833 111 ntBASIC3.59□□□□□ -1.83
SMC3Q9UQE7 RNU6-932P-201ENST00000391108 106 ntBASIC3.59□□□□□ -1.83
SMC3Q9UQE7 SNORA26.7-201ENST00000391288 122 ntBASIC3.59□□□□□ -1.83
SMC3Q9UQE7 RNU4-78P-201ENST00000410940 126 ntBASIC3.59□□□□□ -1.83
SMC3Q9UQE7 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC3.59□□□□□ -1.83
SMC3Q9UQE7 AL159987.2-201ENST00000432754 307 ntBASIC3.59□□□□□ -1.83
SMC3Q9UQE7 AC011242.1-201ENST00000433596 1158 ntBASIC3.59□□□□□ -1.83
SMC3Q9UQE7 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC3.59□□□□□ -1.83
SMC3Q9UQE7 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.59□□□□□ -1.83
SMC3Q9UQE7 RN7SL863P-201ENST00000462370 296 ntBASIC3.59□□□□□ -1.83
SMC3Q9UQE7 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SMC3Q9UQE7 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.59□□□□□ -1.83
SMC3Q9UQE7 RN7SL633P-201ENST00000488974 297 ntBASIC3.59□□□□□ -1.83
SMC3Q9UQE7 KLHL2P1-201ENST00000508691 521 ntBASIC3.59□□□□□ -1.83
SMC3Q9UQE7 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.59□□□□□ -1.83
SMC3Q9UQE7 SNORA31.1-201ENST00000515993 133 ntBASIC3.59□□□□□ -1.83
SMC3Q9UQE7 SNORA31.5-201ENST00000516190 133 ntBASIC3.59□□□□□ -1.83
SMC3Q9UQE7 RNU6-416P-201ENST00000516265 103 ntBASIC3.59□□□□□ -1.83
SMC3Q9UQE7 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.59□□□□□ -1.83
SMC3Q9UQE7 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC3.59□□□□□ -1.83
SMC3Q9UQE7 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.59□□□□□ -1.83
SMC3Q9UQE7 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.59□□□□□ -1.83
SMC3Q9UQE7 AC055876.1-202ENST00000567053 138 ntBASIC3.59□□□□□ -1.83
SMC3Q9UQE7 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.59□□□□□ -1.83
SMC3Q9UQE7 AC090079.2-201ENST00000575289 768 ntBASIC3.59□□□□□ -1.83
SMC3Q9UQE7 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.59□□□□□ -1.83
SMC3Q9UQE7 DUXAP4-201ENST00000603046 613 ntBASIC3.59□□□□□ -1.83
SMC3Q9UQE7 AC120053.1-201ENST00000607706 736 ntBASIC3.59□□□□□ -1.83
SMC3Q9UQE7 AL513477.2-201ENST00000607858 568 ntBASIC3.59□□□□□ -1.83
SMC3Q9UQE7 AC013468.1-201ENST00000608680 598 ntBASIC3.59□□□□□ -1.83
SMC3Q9UQE7 AC131902.3-201ENST00000611767 581 ntBASIC3.59□□□□□ -1.83
SMC3Q9UQE7 AP000720.1-201ENST00000625091 483 ntBASIC3.59□□□□□ -1.83
SMC3Q9UQE7 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
SMC3Q9UQE7 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SMC3Q9UQE7 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.59□□□□□ -1.84
SMC3Q9UQE7 AP002907.1-201ENST00000606361 1430 ntBASIC3.59□□□□□ -1.84
SMC3Q9UQE7 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
SMC3Q9UQE7 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.84
SMC3Q9UQE7 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SMC3Q9UQE7 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.58□□□□□ -1.84
SMC3Q9UQE7 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SMC3Q9UQE7 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms