Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 PTMAP5-201ENST00000393073 333 ntBASIC6.05□□□□□ -1.44
CDK11AQ9UQ88 AL121972.1-201ENST00000402023 252 ntBASIC6.05□□□□□ -1.44
CDK11AQ9UQ88 RPL23AP39-201ENST00000415533 405 ntBASIC6.05□□□□□ -1.44
CDK11AQ9UQ88 MTCYBP38-201ENST00000417160 1123 ntBASIC6.05□□□□□ -1.44
CDK11AQ9UQ88 OFD1P18Y-201ENST00000420889 959 ntBASIC6.05□□□□□ -1.44
CDK11AQ9UQ88 Z99497.1-201ENST00000421282 135 ntBASIC6.05□□□□□ -1.44
CDK11AQ9UQ88 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC6.05□□□□□ -1.44
CDK11AQ9UQ88 MED14P1-201ENST00000430517 648 ntBASIC6.05□□□□□ -1.44
CDK11AQ9UQ88 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC6.05□□□□□ -1.44
CDK11AQ9UQ88 RPS3AP12-201ENST00000443616 753 ntBASIC6.05□□□□□ -1.44
CDK11AQ9UQ88 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC6.05□□□□□ -1.44
CDK11AQ9UQ88 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CDK11AQ9UQ88 RPL26P28-201ENST00000451325 435 ntBASIC6.05□□□□□ -1.44
CDK11AQ9UQ88 RAP1BP2-201ENST00000478270 544 ntBASIC6.05□□□□□ -1.44
CDK11AQ9UQ88 AC106707.2-201ENST00000484182 374 ntBASIC6.05□□□□□ -1.44
CDK11AQ9UQ88 AC108078.3-201ENST00000502633 489 ntBASIC6.05□□□□□ -1.44
CDK11AQ9UQ88 VWA8P1-201ENST00000510889 176 ntBASIC6.05□□□□□ -1.44
CDK11AQ9UQ88 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
CDK11AQ9UQ88 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC6.05□□□□□ -1.44
CDK11AQ9UQ88 RNU2-58P-201ENST00000516403 183 ntBASIC6.05□□□□□ -1.44
CDK11AQ9UQ88 RN7SKP116-201ENST00000516902 319 ntBASIC6.05□□□□□ -1.44
CDK11AQ9UQ88 AC239860.2-201ENST00000525886 270 ntBASIC6.05□□□□□ -1.44
CDK11AQ9UQ88 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CDK11AQ9UQ88 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC6.05□□□□□ -1.44
CDK11AQ9UQ88 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CDK11AQ9UQ88 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CDK11AQ9UQ88 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC6.05□□□□□ -1.44
CDK11AQ9UQ88 AC023161.2-201ENST00000551218 780 ntBASIC6.05□□□□□ -1.44
CDK11AQ9UQ88 AC024909.2-201ENST00000553035 286 ntBASIC6.05□□□□□ -1.44
CDK11AQ9UQ88 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC6.05□□□□□ -1.44
CDK11AQ9UQ88 SULT1C2P1-202ENST00000562418 459 ntBASIC6.05□□□□□ -1.44
CDK11AQ9UQ88 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC6.05□□□□□ -1.44
CDK11AQ9UQ88 AP001521.1-201ENST00000609150 300 ntBASIC6.05□□□□□ -1.44
CDK11AQ9UQ88 AC096577.2-201ENST00000611455 153 ntBASIC6.05□□□□□ -1.44
CDK11AQ9UQ88 AC073114.1-201ENST00000612027 490 ntBASIC6.05□□□□□ -1.44
CDK11AQ9UQ88 uc_338.32-201ENST00000615087 172 ntBASIC6.05□□□□□ -1.44
CDK11AQ9UQ88 AL357559.1-201ENST00000622228 274 ntBASIC6.05□□□□□ -1.44
CDK11AQ9UQ88 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC6.05□□□□□ -1.44
CDK11AQ9UQ88 AC092184.1-201ENST00000625042 715 ntBASIC6.05□□□□□ -1.44
CDK11AQ9UQ88 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC6.05□□□□□ -1.44
CDK11AQ9UQ88 AC099063.3-201ENST00000642066 185 ntBASIC6.05□□□□□ -1.44
CDK11AQ9UQ88 MARK2P15-201ENST00000432204 2186 ntBASIC6.05□□□□□ -1.44
CDK11AQ9UQ88 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CDK11AQ9UQ88 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
CDK11AQ9UQ88 AL079343.1-201ENST00000572358 1771 ntBASIC6.05□□□□□ -1.44
CDK11AQ9UQ88 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CDK11AQ9UQ88 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CDK11AQ9UQ88 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC6.05□□□□□ -1.44
CDK11AQ9UQ88 STK31-205ENST00000433467 3085 ntTSL 2 BASIC6.05□□□□□ -1.44
CDK11AQ9UQ88 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC6.05□□□□□ -1.44
CDK11AQ9UQ88 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC6.04□□□□□ -1.44
CDK11AQ9UQ88 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
CDK11AQ9UQ88 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CDK11AQ9UQ88 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
CDK11AQ9UQ88 RNA5SP72-201ENST00000364442 117 ntBASIC6.04□□□□□ -1.44
CDK11AQ9UQ88 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
CDK11AQ9UQ88 MT-TC-201ENST00000387405 66 ntBASIC6.04□□□□□ -1.44
CDK11AQ9UQ88 CYCSP45-201ENST00000402289 315 ntBASIC6.04□□□□□ -1.44
CDK11AQ9UQ88 RPS29P4-201ENST00000414733 161 ntBASIC6.04□□□□□ -1.44
CDK11AQ9UQ88 AC068533.1-201ENST00000418542 415 ntBASIC6.04□□□□□ -1.44
CDK11AQ9UQ88 AC004552.1-201ENST00000419089 348 ntBASIC6.04□□□□□ -1.44
CDK11AQ9UQ88 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CDK11AQ9UQ88 AC244035.1-201ENST00000430042 390 ntBASIC6.04□□□□□ -1.44
CDK11AQ9UQ88 MTND4P6-201ENST00000438297 472 ntBASIC6.04□□□□□ -1.44
CDK11AQ9UQ88 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC6.04□□□□□ -1.44
CDK11AQ9UQ88 PRDX3P3-201ENST00000447765 522 ntBASIC6.04□□□□□ -1.44
CDK11AQ9UQ88 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC6.04□□□□□ -1.44
CDK11AQ9UQ88 AL121877.1-201ENST00000453704 622 ntBASIC6.04□□□□□ -1.44
CDK11AQ9UQ88 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC6.04□□□□□ -1.44
CDK11AQ9UQ88 snoU13.24-201ENST00000458998 104 ntBASIC6.04□□□□□ -1.44
CDK11AQ9UQ88 RPS26P3-201ENST00000470205 348 ntBASIC6.04□□□□□ -1.44
CDK11AQ9UQ88 AC090543.2-201ENST00000483963 348 ntBASIC6.04□□□□□ -1.44
CDK11AQ9UQ88 AC004057.1-201ENST00000485827 348 ntBASIC6.04□□□□□ -1.44
CDK11AQ9UQ88 OR4G11P-201ENST00000492842 939 ntBASIC6.04□□□□□ -1.44
CDK11AQ9UQ88 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC6.04□□□□□ -1.44
CDK11AQ9UQ88 AC005921.1-201ENST00000510589 286 ntBASIC6.04□□□□□ -1.44
CDK11AQ9UQ88 TBCA-206ENST00000518338 551 ntTSL 2 BASIC6.04□□□□□ -1.44
CDK11AQ9UQ88 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC6.04□□□□□ -1.44
CDK11AQ9UQ88 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC6.04□□□□□ -1.44
CDK11AQ9UQ88 AP003385.6-201ENST00000531603 374 ntBASIC6.04□□□□□ -1.44
CDK11AQ9UQ88 AP004242.1-201ENST00000533701 349 ntBASIC6.04□□□□□ -1.44
CDK11AQ9UQ88 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CDK11AQ9UQ88 OR7K1P-201ENST00000546439 926 ntBASIC6.04□□□□□ -1.44
CDK11AQ9UQ88 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC6.04□□□□□ -1.44
CDK11AQ9UQ88 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC6.04□□□□□ -1.44
CDK11AQ9UQ88 AC107954.1-201ENST00000565906 727 ntBASIC6.04□□□□□ -1.44
CDK11AQ9UQ88 AC007599.1-201ENST00000568688 1174 ntBASIC6.04□□□□□ -1.44
CDK11AQ9UQ88 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC6.04□□□□□ -1.44
CDK11AQ9UQ88 U3.45-201ENST00000607547 219 ntBASIC6.04□□□□□ -1.44
CDK11AQ9UQ88 AC078899.5-201ENST00000612475 178 ntBASIC6.04□□□□□ -1.44
CDK11AQ9UQ88 RBM12B-AS1-201ENST00000623283 653 ntBASIC6.04□□□□□ -1.44
CDK11AQ9UQ88 AL157700.1-201ENST00000561973 1432 ntBASIC6.04□□□□□ -1.44
CDK11AQ9UQ88 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
CDK11AQ9UQ88 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC6.04□□□□□ -1.44
CDK11AQ9UQ88 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
CDK11AQ9UQ88 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CDK11AQ9UQ88 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CDK11AQ9UQ88 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
CDK11AQ9UQ88 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC6.03□□□□□ -1.44
CDK11AQ9UQ88 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 145.3 ms