Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SCN11AQ9UI33 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SCN11AQ9UI33 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.91□□□□□ -1.94
SCN11AQ9UI33 PHKBP1-201ENST00000450951 1951 ntBASIC2.91□□□□□ -1.94
SCN11AQ9UI33 AP001486.2-201ENST00000561652 5113 ntBASIC2.91□□□□□ -1.94
SCN11AQ9UI33 Y_RNA.40-201ENST00000362645 93 ntBASIC2.91□□□□□ -1.94
SCN11AQ9UI33 RNU6-1159P-201ENST00000362933 107 ntBASIC2.91□□□□□ -1.94
SCN11AQ9UI33 DYNLT3P1-201ENST00000378574 347 ntBASIC2.91□□□□□ -1.94
SCN11AQ9UI33 SNORA64-201ENST00000384674 134 ntBASIC2.91□□□□□ -1.94
SCN11AQ9UI33 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC2.91□□□□□ -1.94
SCN11AQ9UI33 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.91□□□□□ -1.94
SCN11AQ9UI33 SNRPGP18-201ENST00000553000 214 ntBASIC2.91□□□□□ -1.94
SCN11AQ9UI33 AC026464.5-201ENST00000562497 722 ntBASIC2.91□□□□□ -1.94
SCN11AQ9UI33 MIR4506-201ENST00000584693 77 ntBASIC2.91□□□□□ -1.94
SCN11AQ9UI33 AC103710.2-201ENST00000609912 942 ntBASIC2.91□□□□□ -1.94
SCN11AQ9UI33 AL136981.2-201ENST00000617319 734 ntBASIC2.91□□□□□ -1.94
SCN11AQ9UI33 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC2.91□□□□□ -1.94
SCN11AQ9UI33 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SCN11AQ9UI33 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
SCN11AQ9UI33 AC008432.1-201ENST00000615912 1320 ntBASIC2.9□□□□□ -1.94
SCN11AQ9UI33 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC2.9□□□□□ -1.94
SCN11AQ9UI33 RPS15AP28-201ENST00000435088 386 ntBASIC2.9□□□□□ -1.94
SCN11AQ9UI33 AC004263.1-201ENST00000479327 332 ntBASIC2.9□□□□□ -1.94
SCN11AQ9UI33 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
SCN11AQ9UI33 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.9□□□□□ -1.95
SCN11AQ9UI33 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
SCN11AQ9UI33 MIR142-201ENST00000384835 87 ntBASIC2.89□□□□□ -1.95
SCN11AQ9UI33 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.89□□□□□ -1.95
SCN11AQ9UI33 RNA5SP445-201ENST00000515889 115 ntBASIC2.89□□□□□ -1.95
SCN11AQ9UI33 AC091488.1-201ENST00000604239 660 ntBASIC2.89□□□□□ -1.95
SCN11AQ9UI33 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SCN11AQ9UI33 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC2.89□□□□□ -1.95
SCN11AQ9UI33 SNORA80E-201ENST00000384744 137 ntBASIC2.89□□□□□ -1.95
SCN11AQ9UI33 AP000926.3-201ENST00000497201 299 ntBASIC2.89□□□□□ -1.95
SCN11AQ9UI33 TRAV31-201ENST00000502780 342 ntBASIC2.89□□□□□ -1.95
SCN11AQ9UI33 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.89□□□□□ -1.95
SCN11AQ9UI33 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.89□□□□□ -1.95
SCN11AQ9UI33 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
SCN11AQ9UI33 AC007536.1-201ENST00000533382 349 ntBASIC2.89□□□□□ -1.95
SCN11AQ9UI33 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.89□□□□□ -1.95
SCN11AQ9UI33 AL353997.5-201ENST00000618886 171 ntBASIC2.89□□□□□ -1.95
SCN11AQ9UI33 XIST_intron.1-201ENST00000619444 68 ntBASIC2.89□□□□□ -1.95
SCN11AQ9UI33 AL356266.1-201ENST00000623311 483 ntBASIC2.89□□□□□ -1.95
SCN11AQ9UI33 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.89□□□□□ -1.95
SCN11AQ9UI33 AC009487.2-201ENST00000420969 6821 ntBASIC2.89□□□□□ -1.95
SCN11AQ9UI33 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SCN11AQ9UI33 AC091152.2-201ENST00000591628 2569 ntBASIC2.88□□□□□ -1.95
SCN11AQ9UI33 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SCN11AQ9UI33 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SCN11AQ9UI33 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
SCN11AQ9UI33 RNU1-91P-201ENST00000364746 163 ntBASIC2.88□□□□□ -1.95
SCN11AQ9UI33 U8.8-201ENST00000365399 135 ntBASIC2.88□□□□□ -1.95
SCN11AQ9UI33 OR5H15-201ENST00000383696 930 ntBASIC2.88□□□□□ -1.95
SCN11AQ9UI33 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
SCN11AQ9UI33 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SCN11AQ9UI33 AL354719.1-201ENST00000406535 843 ntBASIC2.88□□□□□ -1.95
SCN11AQ9UI33 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.88□□□□□ -1.95
SCN11AQ9UI33 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC2.88□□□□□ -1.95
SCN11AQ9UI33 TRBV1-201ENST00000476502 284 ntBASIC2.88□□□□□ -1.95
SCN11AQ9UI33 RNA5SP385-201ENST00000515947 110 ntBASIC2.88□□□□□ -1.95
SCN11AQ9UI33 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC2.88□□□□□ -1.95
SCN11AQ9UI33 AC078814.3-201ENST00000553036 491 ntBASIC2.88□□□□□ -1.95
SCN11AQ9UI33 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.88□□□□□ -1.95
SCN11AQ9UI33 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
SCN11AQ9UI33 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SCN11AQ9UI33 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC2.88□□□□□ -1.95
SCN11AQ9UI33 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.88□□□□□ -1.95
SCN11AQ9UI33 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SCN11AQ9UI33 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SCN11AQ9UI33 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SCN11AQ9UI33 AC011155.1-201ENST00000316512 456 ntBASIC2.87□□□□□ -1.95
SCN11AQ9UI33 Y_RNA.338-201ENST00000365320 114 ntBASIC2.87□□□□□ -1.95
SCN11AQ9UI33 SNORA17.3-201ENST00000391159 129 ntBASIC2.87□□□□□ -1.95
SCN11AQ9UI33 MIR1287-201ENST00000408492 90 ntBASIC2.87□□□□□ -1.95
SCN11AQ9UI33 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.87□□□□□ -1.95
SCN11AQ9UI33 MTND4LP12-201ENST00000448237 295 ntBASIC2.87□□□□□ -1.95
SCN11AQ9UI33 RAD51AP1P1-201ENST00000484195 1001 ntBASIC2.87□□□□□ -1.95
SCN11AQ9UI33 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.87□□□□□ -1.95
SCN11AQ9UI33 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.87□□□□□ -1.95
SCN11AQ9UI33 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.87□□□□□ -1.95
SCN11AQ9UI33 MIR6845-201ENST00000613182 61 ntBASIC2.87□□□□□ -1.95
SCN11AQ9UI33 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
SCN11AQ9UI33 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
SCN11AQ9UI33 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
SCN11AQ9UI33 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
SCN11AQ9UI33 RANP7-201ENST00000418085 644 ntBASIC2.87□□□□□ -1.95
SCN11AQ9UI33 PTP4A1P7-201ENST00000423476 514 ntBASIC2.87□□□□□ -1.95
SCN11AQ9UI33 AC092427.1-202ENST00000430569 476 ntBASIC2.87□□□□□ -1.95
SCN11AQ9UI33 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC2.87□□□□□ -1.95
SCN11AQ9UI33 AC243772.1-201ENST00000451620 410 ntBASIC2.87□□□□□ -1.95
SCN11AQ9UI33 AL354710.1-201ENST00000453641 246 ntBASIC2.87□□□□□ -1.95
SCN11AQ9UI33 MTCO3P11-201ENST00000455103 774 ntBASIC2.87□□□□□ -1.95
SCN11AQ9UI33 MTCYBP14-201ENST00000457471 715 ntBASIC2.87□□□□□ -1.95
SCN11AQ9UI33 AP001086.1-201ENST00000494882 321 ntBASIC2.87□□□□□ -1.95
SCN11AQ9UI33 RNA5SP200-201ENST00000516360 103 ntBASIC2.87□□□□□ -1.95
SCN11AQ9UI33 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC2.87□□□□□ -1.95
SCN11AQ9UI33 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC2.87□□□□□ -1.95
SCN11AQ9UI33 AC103710.1-201ENST00000610003 901 ntBASIC2.87□□□□□ -1.95
SCN11AQ9UI33 AC012531.5-201ENST00000611375 151 ntBASIC2.87□□□□□ -1.95
SCN11AQ9UI33 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms