Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.6□□□□□ -1.99
VPS29Q9UBQ0 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC2.6□□□□□ -1.99
VPS29Q9UBQ0 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
VPS29Q9UBQ0 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC2.6□□□□□ -1.99
VPS29Q9UBQ0 AC096947.1-201ENST00000603233 470 ntBASIC2.6□□□□□ -1.99
VPS29Q9UBQ0 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.6□□□□□ -1.99
VPS29Q9UBQ0 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.6□□□□□ -1.99
VPS29Q9UBQ0 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
VPS29Q9UBQ0 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.6□□□□□ -1.99
VPS29Q9UBQ0 MIR6733-201ENST00000635723 61 ntBASIC2.6□□□□□ -1.99
VPS29Q9UBQ0 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
VPS29Q9UBQ0 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
VPS29Q9UBQ0 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
VPS29Q9UBQ0 AC009501.3-201ENST00000605001 1352 ntBASIC2.6□□□□□ -1.99
VPS29Q9UBQ0 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
VPS29Q9UBQ0 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
VPS29Q9UBQ0 Y_RNA.493-201ENST00000384422 102 ntBASIC2.59□□□□□ -1.99
VPS29Q9UBQ0 MT-TC-201ENST00000387405 66 ntBASIC2.59□□□□□ -1.99
VPS29Q9UBQ0 AL138827.1-201ENST00000402666 306 ntBASIC2.59□□□□□ -1.99
VPS29Q9UBQ0 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.59□□□□□ -1.99
VPS29Q9UBQ0 UBE2D3P2-201ENST00000424409 445 ntBASIC2.59□□□□□ -1.99
VPS29Q9UBQ0 AC087499.2-201ENST00000432861 149 ntBASIC2.59□□□□□ -1.99
VPS29Q9UBQ0 RPL23AP15-201ENST00000450202 459 ntBASIC2.59□□□□□ -1.99
VPS29Q9UBQ0 SLC25A15P5-201ENST00000508033 253 ntBASIC2.59□□□□□ -1.99
VPS29Q9UBQ0 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC2.59□□□□□ -1.99
VPS29Q9UBQ0 RGS4-207ENST00000527809 817 ntTSL 4 BASIC2.59□□□□□ -1.99
VPS29Q9UBQ0 AC113192.3-201ENST00000529152 742 ntBASIC2.59□□□□□ -1.99
VPS29Q9UBQ0 AP003385.6-201ENST00000531603 374 ntBASIC2.59□□□□□ -1.99
VPS29Q9UBQ0 ELOCP31-201ENST00000540463 467 ntBASIC2.59□□□□□ -1.99
VPS29Q9UBQ0 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC2.59□□□□□ -1.99
VPS29Q9UBQ0 AL442163.2-201ENST00000553912 710 ntBASIC2.59□□□□□ -1.99
VPS29Q9UBQ0 CYCSP39-201ENST00000565821 309 ntBASIC2.59□□□□□ -1.99
VPS29Q9UBQ0 AC135178.6-201ENST00000605314 398 ntBASIC2.59□□□□□ -1.99
VPS29Q9UBQ0 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC2.59□□□□□ -1.99
VPS29Q9UBQ0 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
VPS29Q9UBQ0 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.58□□□□□ -2
VPS29Q9UBQ0 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
VPS29Q9UBQ0 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
VPS29Q9UBQ0 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
VPS29Q9UBQ0 AC016716.1-201ENST00000265882 708 ntBASIC2.58□□□□□ -2
VPS29Q9UBQ0 MIR208A-201ENST00000362287 71 ntBASIC2.58□□□□□ -2
VPS29Q9UBQ0 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.58□□□□□ -2
VPS29Q9UBQ0 SNORD21-201ENST00000383953 95 ntBASIC2.58□□□□□ -2
VPS29Q9UBQ0 RNU6-152P-201ENST00000384037 107 ntBASIC2.58□□□□□ -2
VPS29Q9UBQ0 SNORA11-201ENST00000408789 128 ntBASIC2.58□□□□□ -2
VPS29Q9UBQ0 RNA5SP21-201ENST00000410917 96 ntBASIC2.58□□□□□ -2
VPS29Q9UBQ0 RNU4-78P-201ENST00000410940 126 ntBASIC2.58□□□□□ -2
VPS29Q9UBQ0 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.58□□□□□ -2
VPS29Q9UBQ0 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.58□□□□□ -2
VPS29Q9UBQ0 ATG3P1-201ENST00000419507 911 ntBASIC2.58□□□□□ -2
VPS29Q9UBQ0 AL513175.2-201ENST00000422071 443 ntBASIC2.58□□□□□ -2
VPS29Q9UBQ0 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.58□□□□□ -2
VPS29Q9UBQ0 UBE2V1P6-201ENST00000430840 422 ntBASIC2.58□□□□□ -2
VPS29Q9UBQ0 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.58□□□□□ -2
VPS29Q9UBQ0 RPL23AP58-201ENST00000440453 469 ntBASIC2.58□□□□□ -2
VPS29Q9UBQ0 AL135938.1-201ENST00000443141 297 ntBASIC2.58□□□□□ -2
VPS29Q9UBQ0 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.58□□□□□ -2
VPS29Q9UBQ0 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.58□□□□□ -2
VPS29Q9UBQ0 RPS27AP9-201ENST00000477681 438 ntBASIC2.58□□□□□ -2
VPS29Q9UBQ0 AC090525.1-201ENST00000479116 478 ntBASIC2.58□□□□□ -2
VPS29Q9UBQ0 AC011825.1-201ENST00000484967 388 ntBASIC2.58□□□□□ -2
VPS29Q9UBQ0 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC2.58□□□□□ -2
VPS29Q9UBQ0 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.58□□□□□ -2
VPS29Q9UBQ0 AC098799.2-201ENST00000509466 868 ntBASIC2.58□□□□□ -2
VPS29Q9UBQ0 MTCYBP37-201ENST00000510642 1133 ntBASIC2.58□□□□□ -2
VPS29Q9UBQ0 AC133963.2-201ENST00000513686 578 ntBASIC2.58□□□□□ -2
VPS29Q9UBQ0 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.58□□□□□ -2
VPS29Q9UBQ0 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.58□□□□□ -2
VPS29Q9UBQ0 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC2.58□□□□□ -2
VPS29Q9UBQ0 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.58□□□□□ -2
VPS29Q9UBQ0 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC2.58□□□□□ -2
VPS29Q9UBQ0 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC2.58□□□□□ -2
VPS29Q9UBQ0 CR383656.14-201ENST00000551951 406 ntBASIC2.58□□□□□ -2
VPS29Q9UBQ0 AC007954.1-201ENST00000554198 494 ntBASIC2.58□□□□□ -2
VPS29Q9UBQ0 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.58□□□□□ -2
VPS29Q9UBQ0 MTCO3P13-201ENST00000577757 781 ntBASIC2.58□□□□□ -2
VPS29Q9UBQ0 AL669831.4-202ENST00000590817 238 ntBASIC2.58□□□□□ -2
VPS29Q9UBQ0 AC092474.3-201ENST00000603022 568 ntBASIC2.58□□□□□ -2
VPS29Q9UBQ0 MTCO3P22-201ENST00000603219 784 ntBASIC2.58□□□□□ -2
VPS29Q9UBQ0 AC073111.2-201ENST00000605657 1075 ntBASIC2.58□□□□□ -2
VPS29Q9UBQ0 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.58□□□□□ -2
VPS29Q9UBQ0 AC109315.1-201ENST00000584143 1347 ntBASIC2.58□□□□□ -2
VPS29Q9UBQ0 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.58□□□□□ -2
VPS29Q9UBQ0 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC2.58□□□□□ -2
VPS29Q9UBQ0 AC233263.6-201ENST00000631132 1963 ntBASIC2.58□□□□□ -2
VPS29Q9UBQ0 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
VPS29Q9UBQ0 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
VPS29Q9UBQ0 MIR592-201ENST00000384959 97 ntBASIC2.57□□□□□ -2
VPS29Q9UBQ0 RNA5SP56-201ENST00000410277 118 ntBASIC2.57□□□□□ -2
VPS29Q9UBQ0 RNA5SP38-201ENST00000410750 119 ntBASIC2.57□□□□□ -2
VPS29Q9UBQ0 MTCO3P12-201ENST00000416718 547 ntBASIC2.57□□□□□ -2
VPS29Q9UBQ0 RPL36P19-201ENST00000430744 301 ntBASIC2.57□□□□□ -2
VPS29Q9UBQ0 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC2.57□□□□□ -2
VPS29Q9UBQ0 RPL23AP74-201ENST00000437246 471 ntBASIC2.57□□□□□ -2
VPS29Q9UBQ0 AL606490.8-201ENST00000441624 319 ntBASIC2.57□□□□□ -2
VPS29Q9UBQ0 RSL24D1P2-201ENST00000445584 366 ntBASIC2.57□□□□□ -2
VPS29Q9UBQ0 RPL23AP31-201ENST00000456160 467 ntBASIC2.57□□□□□ -2
VPS29Q9UBQ0 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC2.57□□□□□ -2
VPS29Q9UBQ0 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.57□□□□□ -2
VPS29Q9UBQ0 SNORA70.24-201ENST00000517233 118 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms