Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
MKS1Q9NXB0 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.62□□□□□ -1.67
MKS1Q9NXB0 DHX40P1-201ENST00000588725 1412 ntBASIC4.62□□□□□ -1.67
MKS1Q9NXB0 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
MKS1Q9NXB0 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.62□□□□□ -1.67
MKS1Q9NXB0 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
MKS1Q9NXB0 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.62□□□□□ -1.67
MKS1Q9NXB0 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
MKS1Q9NXB0 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.61□□□□□ -1.67
MKS1Q9NXB0 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.61□□□□□ -1.67
MKS1Q9NXB0 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
MKS1Q9NXB0 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
MKS1Q9NXB0 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
MKS1Q9NXB0 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.61□□□□□ -1.67
MKS1Q9NXB0 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
MKS1Q9NXB0 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.61□□□□□ -1.67
MKS1Q9NXB0 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.61□□□□□ -1.67
MKS1Q9NXB0 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.61□□□□□ -1.67
MKS1Q9NXB0 U3.15-201ENST00000365398 212 ntBASIC4.61□□□□□ -1.67
MKS1Q9NXB0 RN7SKP269-201ENST00000365545 319 ntBASIC4.61□□□□□ -1.67
MKS1Q9NXB0 LAP3P1-201ENST00000403648 294 ntBASIC4.61□□□□□ -1.67
MKS1Q9NXB0 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.61□□□□□ -1.67
MKS1Q9NXB0 AL137014.1-201ENST00000420490 1226 ntBASIC4.61□□□□□ -1.67
MKS1Q9NXB0 FCF1P1-201ENST00000432690 571 ntBASIC4.61□□□□□ -1.67
MKS1Q9NXB0 RPL21P89-201ENST00000444021 467 ntBASIC4.61□□□□□ -1.67
MKS1Q9NXB0 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.61□□□□□ -1.67
MKS1Q9NXB0 MTCO2P29-201ENST00000465212 189 ntBASIC4.61□□□□□ -1.67
MKS1Q9NXB0 AC006967.1-201ENST00000467608 589 ntBASIC4.61□□□□□ -1.67
MKS1Q9NXB0 AP000926.1-201ENST00000479573 241 ntBASIC4.61□□□□□ -1.67
MKS1Q9NXB0 AC072052.1-201ENST00000496556 306 ntBASIC4.61□□□□□ -1.67
MKS1Q9NXB0 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.61□□□□□ -1.67
MKS1Q9NXB0 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
MKS1Q9NXB0 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC4.61□□□□□ -1.67
MKS1Q9NXB0 FTH1P21-201ENST00000512179 511 ntBASIC4.61□□□□□ -1.67
MKS1Q9NXB0 AC015795.1-201ENST00000513669 327 ntBASIC4.61□□□□□ -1.67
MKS1Q9NXB0 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.61□□□□□ -1.67
MKS1Q9NXB0 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC4.61□□□□□ -1.67
MKS1Q9NXB0 FAM92A1P1-201ENST00000528023 890 ntBASIC4.61□□□□□ -1.67
MKS1Q9NXB0 AC133555.2-201ENST00000550213 292 ntBASIC4.61□□□□□ -1.67
MKS1Q9NXB0 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.61□□□□□ -1.67
MKS1Q9NXB0 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.61□□□□□ -1.67
MKS1Q9NXB0 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.61□□□□□ -1.67
MKS1Q9NXB0 MIR3167-201ENST00000579623 85 ntBASIC4.61□□□□□ -1.67
MKS1Q9NXB0 AC090616.5-202ENST00000582111 297 ntBASIC4.61□□□□□ -1.67
MKS1Q9NXB0 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.61□□□□□ -1.67
MKS1Q9NXB0 RBM11P1-201ENST00000604951 799 ntBASIC4.61□□□□□ -1.67
MKS1Q9NXB0 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC4.61□□□□□ -1.67
MKS1Q9NXB0 AC245517.5-201ENST00000611529 162 ntBASIC4.61□□□□□ -1.67
MKS1Q9NXB0 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
MKS1Q9NXB0 MLECP1-201ENST00000615893 709 ntBASIC4.61□□□□□ -1.67
MKS1Q9NXB0 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
MKS1Q9NXB0 ANKRD36BP1-202ENST00000604892 1417 ntBASIC4.61□□□□□ -1.67
MKS1Q9NXB0 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.61□□□□□ -1.67
MKS1Q9NXB0 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
MKS1Q9NXB0 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
MKS1Q9NXB0 MAPK10-372ENST00000641954 3413 ntBASIC4.6□□□□□ -1.67
MKS1Q9NXB0 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.6□□□□□ -1.67
MKS1Q9NXB0 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
MKS1Q9NXB0 AL442639.1-201ENST00000625030 1899 ntBASIC4.6□□□□□ -1.67
MKS1Q9NXB0 RNU6-1155P-201ENST00000363554 107 ntBASIC4.6□□□□□ -1.67
MKS1Q9NXB0 SNORA20.2-201ENST00000383922 131 ntBASIC4.6□□□□□ -1.67
MKS1Q9NXB0 RNU6-1103P-201ENST00000384150 107 ntBASIC4.6□□□□□ -1.67
MKS1Q9NXB0 Y_RNA.554-201ENST00000384672 102 ntBASIC4.6□□□□□ -1.67
MKS1Q9NXB0 RNU1-82P-201ENST00000390851 165 ntBASIC4.6□□□□□ -1.67
MKS1Q9NXB0 MTCO3P40-201ENST00000392516 676 ntBASIC4.6□□□□□ -1.67
MKS1Q9NXB0 RPL7P60-201ENST00000397636 735 ntBASIC4.6□□□□□ -1.67
MKS1Q9NXB0 RNU4-55P-201ENST00000410731 137 ntBASIC4.6□□□□□ -1.67
MKS1Q9NXB0 RNU6-516P-201ENST00000411381 104 ntBASIC4.6□□□□□ -1.67
MKS1Q9NXB0 GJA6P-201ENST00000415117 1042 ntBASIC4.6□□□□□ -1.67
MKS1Q9NXB0 CCDC58P2-201ENST00000417131 366 ntBASIC4.6□□□□□ -1.67
MKS1Q9NXB0 AC244098.2-201ENST00000422068 99 ntBASIC4.6□□□□□ -1.67
MKS1Q9NXB0 AC007283.2-201ENST00000424739 197 ntBASIC4.6□□□□□ -1.67
MKS1Q9NXB0 MTCO2P11-201ENST00000431069 680 ntBASIC4.6□□□□□ -1.67
MKS1Q9NXB0 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.6□□□□□ -1.67
MKS1Q9NXB0 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.6□□□□□ -1.67
MKS1Q9NXB0 UBE2V1P8-201ENST00000437166 265 ntBASIC4.6□□□□□ -1.67
MKS1Q9NXB0 CNOT7P2-201ENST00000441051 832 ntBASIC4.6□□□□□ -1.67
MKS1Q9NXB0 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC4.6□□□□□ -1.67
MKS1Q9NXB0 AC132479.1-201ENST00000449160 144 ntBASIC4.6□□□□□ -1.67
MKS1Q9NXB0 AC234775.1-201ENST00000454247 670 ntBASIC4.6□□□□□ -1.67
MKS1Q9NXB0 AURKAPS2-201ENST00000454983 333 ntBASIC4.6□□□□□ -1.67
MKS1Q9NXB0 AC007967.1-201ENST00000455422 1159 ntBASIC4.6□□□□□ -1.67
MKS1Q9NXB0 AC108059.3-201ENST00000456388 214 ntBASIC4.6□□□□□ -1.67
MKS1Q9NXB0 RNU7-59P-201ENST00000459101 61 ntBASIC4.6□□□□□ -1.67
MKS1Q9NXB0 RN7SL172P-201ENST00000460535 303 ntBASIC4.6□□□□□ -1.67
MKS1Q9NXB0 RPL7P23-201ENST00000493874 747 ntBASIC4.6□□□□□ -1.67
MKS1Q9NXB0 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.6□□□□□ -1.67
MKS1Q9NXB0 SCARNA22-201ENST00000503991 125 ntBASIC4.6□□□□□ -1.67
MKS1Q9NXB0 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC4.6□□□□□ -1.67
MKS1Q9NXB0 AC021146.1-201ENST00000511202 716 ntBASIC4.6□□□□□ -1.67
MKS1Q9NXB0 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.6□□□□□ -1.67
MKS1Q9NXB0 SAP18P1-201ENST00000512058 390 ntBASIC4.6□□□□□ -1.67
MKS1Q9NXB0 AC004980.4-201ENST00000513375 203 ntBASIC4.6□□□□□ -1.67
MKS1Q9NXB0 ATP5LP3-201ENST00000514223 304 ntBASIC4.6□□□□□ -1.67
MKS1Q9NXB0 RNA5SP337-201ENST00000517007 109 ntBASIC4.6□□□□□ -1.67
MKS1Q9NXB0 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.6□□□□□ -1.67
MKS1Q9NXB0 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.6□□□□□ -1.67
MKS1Q9NXB0 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.6□□□□□ -1.67
MKS1Q9NXB0 AC022832.1-201ENST00000530718 645 ntBASIC4.6□□□□□ -1.67
MKS1Q9NXB0 AP000857.1-201ENST00000532151 543 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms