Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
SIX2Q9NPC8 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
SIX2Q9NPC8 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SIX2Q9NPC8 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
SIX2Q9NPC8 RNU6-921P-201ENST00000384361 107 ntBASIC3.66□□□□□ -1.82
SIX2Q9NPC8 RNU6-178P-201ENST00000384631 104 ntBASIC3.66□□□□□ -1.82
SIX2Q9NPC8 RPL23AP29-201ENST00000397284 453 ntBASIC3.66□□□□□ -1.82
SIX2Q9NPC8 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.66□□□□□ -1.82
SIX2Q9NPC8 AL021407.1-201ENST00000404531 386 ntBASIC3.66□□□□□ -1.82
SIX2Q9NPC8 RN7SKP202-201ENST00000410439 330 ntBASIC3.66□□□□□ -1.82
SIX2Q9NPC8 AL356968.1-201ENST00000416622 474 ntBASIC3.66□□□□□ -1.82
SIX2Q9NPC8 GLRXP1-201ENST00000423261 334 ntBASIC3.66□□□□□ -1.82
SIX2Q9NPC8 BX119904.4-201ENST00000424402 301 ntBASIC3.66□□□□□ -1.82
SIX2Q9NPC8 AC018644.1-201ENST00000429934 551 ntBASIC3.66□□□□□ -1.82
SIX2Q9NPC8 MTND6P18-201ENST00000439477 513 ntBASIC3.66□□□□□ -1.82
SIX2Q9NPC8 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.66□□□□□ -1.82
SIX2Q9NPC8 RPL21P23-201ENST00000446654 460 ntBASIC3.66□□□□□ -1.82
SIX2Q9NPC8 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.66□□□□□ -1.82
SIX2Q9NPC8 AC008264.1-201ENST00000447612 367 ntBASIC3.66□□□□□ -1.82
SIX2Q9NPC8 AL133547.1-201ENST00000448546 220 ntBASIC3.66□□□□□ -1.82
SIX2Q9NPC8 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3.66□□□□□ -1.82
SIX2Q9NPC8 AP000893.1-201ENST00000474462 794 ntBASIC3.66□□□□□ -1.82
SIX2Q9NPC8 AC013828.1-201ENST00000481845 158 ntBASIC3.66□□□□□ -1.82
SIX2Q9NPC8 RPL7P47-201ENST00000497299 556 ntBASIC3.66□□□□□ -1.82
SIX2Q9NPC8 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.66□□□□□ -1.82
SIX2Q9NPC8 AC112198.1-201ENST00000505369 1220 ntBASIC3.66□□□□□ -1.82
SIX2Q9NPC8 AC093281.2-201ENST00000510153 597 ntBASIC3.66□□□□□ -1.82
SIX2Q9NPC8 RNU6-678P-201ENST00000516832 109 ntBASIC3.66□□□□□ -1.82
SIX2Q9NPC8 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SIX2Q9NPC8 AC090819.1-201ENST00000523800 1111 ntBASIC3.66□□□□□ -1.82
SIX2Q9NPC8 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.66□□□□□ -1.82
SIX2Q9NPC8 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.66□□□□□ -1.82
SIX2Q9NPC8 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.66□□□□□ -1.82
SIX2Q9NPC8 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SIX2Q9NPC8 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.66□□□□□ -1.82
SIX2Q9NPC8 MIR3915-201ENST00000578518 97 ntBASIC3.66□□□□□ -1.82
SIX2Q9NPC8 SNORD39.3-201ENST00000584451 71 ntBASIC3.66□□□□□ -1.82
SIX2Q9NPC8 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.66□□□□□ -1.82
SIX2Q9NPC8 AC008083.4-201ENST00000615076 444 ntBASIC3.66□□□□□ -1.82
SIX2Q9NPC8 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.66□□□□□ -1.82
SIX2Q9NPC8 AC091931.1-201ENST00000623488 728 ntBASIC3.66□□□□□ -1.82
SIX2Q9NPC8 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
SIX2Q9NPC8 AC098679.5-201ENST00000624394 571 ntBASIC3.66□□□□□ -1.82
SIX2Q9NPC8 AC091965.5-201ENST00000624785 342 ntBASIC3.66□□□□□ -1.82
SIX2Q9NPC8 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SIX2Q9NPC8 AC021755.1-201ENST00000559747 1447 ntBASIC3.66□□□□□ -1.82
SIX2Q9NPC8 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SIX2Q9NPC8 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.66□□□□□ -1.82
SIX2Q9NPC8 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SIX2Q9NPC8 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SIX2Q9NPC8 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
SIX2Q9NPC8 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.66□□□□□ -1.82
SIX2Q9NPC8 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.66□□□□□ -1.82
SIX2Q9NPC8 TNPO1P3-201ENST00000436471 2662 ntBASIC3.66□□□□□ -1.82
SIX2Q9NPC8 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SIX2Q9NPC8 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
SIX2Q9NPC8 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.65□□□□□ -1.82
SIX2Q9NPC8 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.65□□□□□ -1.82
SIX2Q9NPC8 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SIX2Q9NPC8 AL359837.1-201ENST00000381357 287 ntBASIC3.65□□□□□ -1.83
SIX2Q9NPC8 RNU6-657P-201ENST00000383904 107 ntBASIC3.65□□□□□ -1.83
SIX2Q9NPC8 RNU6ATAC-201ENST00000408749 126 ntBASIC3.65□□□□□ -1.83
SIX2Q9NPC8 AC126124.2-201ENST00000413542 321 ntBASIC3.65□□□□□ -1.83
SIX2Q9NPC8 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.65□□□□□ -1.83
SIX2Q9NPC8 RPS12P23-201ENST00000419579 400 ntBASIC3.65□□□□□ -1.83
SIX2Q9NPC8 SEPT2P1-201ENST00000419651 180 ntBASIC3.65□□□□□ -1.83
SIX2Q9NPC8 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.65□□□□□ -1.83
SIX2Q9NPC8 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.65□□□□□ -1.83
SIX2Q9NPC8 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
SIX2Q9NPC8 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.65□□□□□ -1.83
SIX2Q9NPC8 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.65□□□□□ -1.83
SIX2Q9NPC8 MTCO3P11-201ENST00000455103 774 ntBASIC3.65□□□□□ -1.83
SIX2Q9NPC8 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC3.65□□□□□ -1.83
SIX2Q9NPC8 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.65□□□□□ -1.83
SIX2Q9NPC8 AC104685.1-201ENST00000502445 371 ntBASIC3.65□□□□□ -1.83
SIX2Q9NPC8 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.65□□□□□ -1.83
SIX2Q9NPC8 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.65□□□□□ -1.83
SIX2Q9NPC8 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.65□□□□□ -1.83
SIX2Q9NPC8 RNU1-45P-201ENST00000517191 141 ntBASIC3.65□□□□□ -1.83
SIX2Q9NPC8 AC107934.2-201ENST00000518653 310 ntBASIC3.65□□□□□ -1.83
SIX2Q9NPC8 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC3.65□□□□□ -1.83
SIX2Q9NPC8 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.65□□□□□ -1.83
SIX2Q9NPC8 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.65□□□□□ -1.83
SIX2Q9NPC8 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.65□□□□□ -1.83
SIX2Q9NPC8 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.65□□□□□ -1.83
SIX2Q9NPC8 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.65□□□□□ -1.83
SIX2Q9NPC8 SULT1C2P1-202ENST00000562418 459 ntBASIC3.65□□□□□ -1.83
SIX2Q9NPC8 NBR2-204ENST00000587322 63 ntBASIC3.65□□□□□ -1.83
SIX2Q9NPC8 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.65□□□□□ -1.83
SIX2Q9NPC8 OR2AS2P-201ENST00000606902 342 ntBASIC3.65□□□□□ -1.83
SIX2Q9NPC8 AP001521.1-201ENST00000609150 300 ntBASIC3.65□□□□□ -1.83
SIX2Q9NPC8 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.65□□□□□ -1.83
SIX2Q9NPC8 AL359535.1-201ENST00000612100 1087 ntBASIC3.65□□□□□ -1.83
SIX2Q9NPC8 uc_338.32-201ENST00000615087 172 ntBASIC3.65□□□□□ -1.83
SIX2Q9NPC8 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
SIX2Q9NPC8 AL731566.2-201ENST00000618971 317 ntBASIC3.65□□□□□ -1.83
SIX2Q9NPC8 AC092650.2-201ENST00000619984 902 ntBASIC3.65□□□□□ -1.83
SIX2Q9NPC8 CR392039.5-201ENST00000623201 510 ntBASIC3.65□□□□□ -1.83
SIX2Q9NPC8 AC015908.5-201ENST00000623289 343 ntBASIC3.65□□□□□ -1.83
SIX2Q9NPC8 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms