Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 OR4H12P-201ENST00000556269 907 ntBASIC3.36□□□□□ -1.87
TM9SF3Q9HD45 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.36□□□□□ -1.87
TM9SF3Q9HD45 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC3.36□□□□□ -1.87
TM9SF3Q9HD45 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC3.36□□□□□ -1.87
TM9SF3Q9HD45 AL671309.1-201ENST00000603750 544 ntBASIC3.36□□□□□ -1.87
TM9SF3Q9HD45 AC135507.2-201ENST00000612443 309 ntBASIC3.36□□□□□ -1.87
TM9SF3Q9HD45 AL512506.1-201ENST00000613918 449 ntBASIC3.36□□□□□ -1.87
TM9SF3Q9HD45 AL445493.3-201ENST00000619568 477 ntBASIC3.36□□□□□ -1.87
TM9SF3Q9HD45 SCARNA15.3-201ENST00000626315 122 ntBASIC3.36□□□□□ -1.87
TM9SF3Q9HD45 SCARNA4.1-201ENST00000628597 123 ntBASIC3.36□□□□□ -1.87
TM9SF3Q9HD45 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.36□□□□□ -1.87
TM9SF3Q9HD45 AC139713.2-210ENST00000641741 992 ntBASIC3.36□□□□□ -1.87
TM9SF3Q9HD45 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.36□□□□□ -1.87
TM9SF3Q9HD45 AC007496.3-201ENST00000624987 3443 ntBASIC3.36□□□□□ -1.87
TM9SF3Q9HD45 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.36□□□□□ -1.87
TM9SF3Q9HD45 AC111188.2-201ENST00000529697 1387 ntBASIC3.36□□□□□ -1.87
TM9SF3Q9HD45 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
TM9SF3Q9HD45 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TM9SF3Q9HD45 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TM9SF3Q9HD45 RNU6-792P-201ENST00000363490 107 ntBASIC3.35□□□□□ -1.87
TM9SF3Q9HD45 AL122016.1-201ENST00000403365 367 ntBASIC3.35□□□□□ -1.87
TM9SF3Q9HD45 AL357075.1-201ENST00000404107 726 ntBASIC3.35□□□□□ -1.87
TM9SF3Q9HD45 RNU4-27P-201ENST00000410889 139 ntBASIC3.35□□□□□ -1.87
TM9SF3Q9HD45 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.35□□□□□ -1.87
TM9SF3Q9HD45 HMGN1P24-201ENST00000412282 298 ntBASIC3.35□□□□□ -1.87
TM9SF3Q9HD45 AL133384.1-201ENST00000412744 351 ntBASIC3.35□□□□□ -1.87
TM9SF3Q9HD45 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.35□□□□□ -1.87
TM9SF3Q9HD45 AL445183.3-201ENST00000414168 502 ntBASIC3.35□□□□□ -1.87
TM9SF3Q9HD45 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.35□□□□□ -1.87
TM9SF3Q9HD45 RPL23AP22-201ENST00000437556 453 ntBASIC3.35□□□□□ -1.87
TM9SF3Q9HD45 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.35□□□□□ -1.87
TM9SF3Q9HD45 RPL23AP16-201ENST00000441715 421 ntBASIC3.35□□□□□ -1.87
TM9SF3Q9HD45 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.35□□□□□ -1.87
TM9SF3Q9HD45 AP001992.1-205ENST00000462248 379 ntBASIC3.35□□□□□ -1.87
TM9SF3Q9HD45 AC104472.2-201ENST00000469035 601 ntBASIC3.35□□□□□ -1.87
TM9SF3Q9HD45 RPL21P47-201ENST00000483696 477 ntBASIC3.35□□□□□ -1.87
TM9SF3Q9HD45 AC096751.1-202ENST00000502691 1067 ntBASIC3.35□□□□□ -1.87
TM9SF3Q9HD45 AC021146.5-201ENST00000503544 545 ntBASIC3.35□□□□□ -1.87
TM9SF3Q9HD45 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.35□□□□□ -1.87
TM9SF3Q9HD45 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.35□□□□□ -1.87
TM9SF3Q9HD45 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.35□□□□□ -1.87
TM9SF3Q9HD45 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.35□□□□□ -1.87
TM9SF3Q9HD45 AC005776.1-201ENST00000603164 290 ntBASIC3.35□□□□□ -1.87
TM9SF3Q9HD45 AC110801.1-201ENST00000623590 212 ntBASIC3.35□□□□□ -1.87
TM9SF3Q9HD45 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.35□□□□□ -1.87
TM9SF3Q9HD45 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
TM9SF3Q9HD45 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.35□□□□□ -1.87
TM9SF3Q9HD45 SGO1P1-201ENST00000603525 1447 ntBASIC3.35□□□□□ -1.87
TM9SF3Q9HD45 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
TM9SF3Q9HD45 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.34□□□□□ -1.87
TM9SF3Q9HD45 CUL1P1-201ENST00000509510 2425 ntBASIC3.34□□□□□ -1.87
TM9SF3Q9HD45 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
TM9SF3Q9HD45 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
TM9SF3Q9HD45 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
TM9SF3Q9HD45 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
TM9SF3Q9HD45 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
TM9SF3Q9HD45 RNA5SP197-201ENST00000363357 119 ntBASIC3.34□□□□□ -1.87
TM9SF3Q9HD45 FAT1P1-201ENST00000406588 507 ntBASIC3.34□□□□□ -1.87
TM9SF3Q9HD45 PTGES3P2-201ENST00000407942 482 ntBASIC3.34□□□□□ -1.87
TM9SF3Q9HD45 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.34□□□□□ -1.87
TM9SF3Q9HD45 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.34□□□□□ -1.87
TM9SF3Q9HD45 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.34□□□□□ -1.87
TM9SF3Q9HD45 AC009237.2-201ENST00000421358 284 ntBASIC3.34□□□□□ -1.87
TM9SF3Q9HD45 GTF2IP23-201ENST00000423746 351 ntBASIC3.34□□□□□ -1.87
TM9SF3Q9HD45 RPL7P46-201ENST00000425129 740 ntBASIC3.34□□□□□ -1.87
TM9SF3Q9HD45 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.34□□□□□ -1.87
TM9SF3Q9HD45 RPL17P35-201ENST00000432217 549 ntBASIC3.34□□□□□ -1.87
TM9SF3Q9HD45 AC125238.1-201ENST00000448842 249 ntBASIC3.34□□□□□ -1.87
TM9SF3Q9HD45 MTND2P19-201ENST00000449129 1012 ntBASIC3.34□□□□□ -1.87
TM9SF3Q9HD45 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.34□□□□□ -1.87
TM9SF3Q9HD45 RPS4XP2-201ENST00000458402 793 ntBASIC3.34□□□□□ -1.87
TM9SF3Q9HD45 RPL7P38-201ENST00000488396 739 ntBASIC3.34□□□□□ -1.87
TM9SF3Q9HD45 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.34□□□□□ -1.87
TM9SF3Q9HD45 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.34□□□□□ -1.87
TM9SF3Q9HD45 AC111000.2-201ENST00000507775 550 ntBASIC3.34□□□□□ -1.87
TM9SF3Q9HD45 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.34□□□□□ -1.87
TM9SF3Q9HD45 APOOP4-201ENST00000513530 597 ntBASIC3.34□□□□□ -1.87
TM9SF3Q9HD45 PRELID3BP4-201ENST00000515476 571 ntBASIC3.34□□□□□ -1.87
TM9SF3Q9HD45 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.34□□□□□ -1.87
TM9SF3Q9HD45 IGLVIV-66-1-201ENST00000521832 460 ntBASIC3.34□□□□□ -1.87
TM9SF3Q9HD45 AC026333.2-201ENST00000542164 106 ntBASIC3.34□□□□□ -1.87
TM9SF3Q9HD45 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.34□□□□□ -1.87
TM9SF3Q9HD45 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.34□□□□□ -1.87
TM9SF3Q9HD45 DUXAP6-201ENST00000553858 601 ntBASIC3.34□□□□□ -1.87
TM9SF3Q9HD45 TRAV37-201ENST00000553906 342 ntBASIC3.34□□□□□ -1.87
TM9SF3Q9HD45 AC067852.3-201ENST00000589177 561 ntBASIC3.34□□□□□ -1.87
TM9SF3Q9HD45 AL162713.1-201ENST00000604480 262 ntBASIC3.34□□□□□ -1.87
TM9SF3Q9HD45 AC055876.5-201ENST00000605667 259 ntBASIC3.34□□□□□ -1.87
TM9SF3Q9HD45 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.34□□□□□ -1.87
TM9SF3Q9HD45 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
TM9SF3Q9HD45 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
TM9SF3Q9HD45 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.34□□□□□ -1.88
TM9SF3Q9HD45 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.34□□□□□ -1.88
TM9SF3Q9HD45 AC090740.1-201ENST00000623193 2262 ntBASIC3.33□□□□□ -1.88
TM9SF3Q9HD45 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.33□□□□□ -1.88
TM9SF3Q9HD45 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
TM9SF3Q9HD45 SRP72P2-201ENST00000344851 1979 ntBASIC3.33□□□□□ -1.88
TM9SF3Q9HD45 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
TM9SF3Q9HD45 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
TM9SF3Q9HD45 MIR16-1-201ENST00000385271 89 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 124.4 ms