Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.56□□□□□ -1.84
CHMP1AQ9HD42 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
CHMP1AQ9HD42 BDP1P-201ENST00000582658 1990 ntBASIC3.56□□□□□ -1.84
CHMP1AQ9HD42 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
CHMP1AQ9HD42 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CHMP1AQ9HD42 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CHMP1AQ9HD42 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.55□□□□□ -1.84
CHMP1AQ9HD42 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.55□□□□□ -1.84
CHMP1AQ9HD42 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CHMP1AQ9HD42 OR4K15-201ENST00000305051 1216 ntBASIC3.55□□□□□ -1.84
CHMP1AQ9HD42 RNU6-1181P-201ENST00000384191 106 ntBASIC3.55□□□□□ -1.84
CHMP1AQ9HD42 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CHMP1AQ9HD42 OR1AA1P-201ENST00000419597 916 ntBASIC3.55□□□□□ -1.84
CHMP1AQ9HD42 AL137014.1-201ENST00000420490 1226 ntBASIC3.55□□□□□ -1.84
CHMP1AQ9HD42 Z99497.1-201ENST00000421282 135 ntBASIC3.55□□□□□ -1.84
CHMP1AQ9HD42 BEND7P1-201ENST00000422058 457 ntBASIC3.55□□□□□ -1.84
CHMP1AQ9HD42 AL365184.2-201ENST00000431139 435 ntBASIC3.55□□□□□ -1.84
CHMP1AQ9HD42 AL359265.2-201ENST00000434367 631 ntBASIC3.55□□□□□ -1.84
CHMP1AQ9HD42 AC006466.1-201ENST00000438721 289 ntBASIC3.55□□□□□ -1.84
CHMP1AQ9HD42 MTATP6P26-201ENST00000445926 662 ntBASIC3.55□□□□□ -1.84
CHMP1AQ9HD42 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC3.55□□□□□ -1.84
CHMP1AQ9HD42 EPS15P1-201ENST00000448836 336 ntBASIC3.55□□□□□ -1.84
CHMP1AQ9HD42 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.55□□□□□ -1.84
CHMP1AQ9HD42 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.55□□□□□ -1.84
CHMP1AQ9HD42 KATNBL1P6-201ENST00000453433 915 ntBASIC3.55□□□□□ -1.84
CHMP1AQ9HD42 RAD23BP3-201ENST00000454157 1152 ntBASIC3.55□□□□□ -1.84
CHMP1AQ9HD42 AL049830.2-201ENST00000480072 201 ntBASIC3.55□□□□□ -1.84
CHMP1AQ9HD42 AC013356.1-201ENST00000489027 564 ntBASIC3.55□□□□□ -1.84
CHMP1AQ9HD42 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
CHMP1AQ9HD42 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.55□□□□□ -1.84
CHMP1AQ9HD42 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC3.55□□□□□ -1.84
CHMP1AQ9HD42 AC021678.1-201ENST00000505195 936 ntBASIC3.55□□□□□ -1.84
CHMP1AQ9HD42 AC008638.1-201ENST00000506035 866 ntBASIC3.55□□□□□ -1.84
CHMP1AQ9HD42 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.55□□□□□ -1.84
CHMP1AQ9HD42 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.55□□□□□ -1.84
CHMP1AQ9HD42 RNU2-58P-201ENST00000516403 183 ntBASIC3.55□□□□□ -1.84
CHMP1AQ9HD42 Y_RNA.688-201ENST00000516565 95 ntBASIC3.55□□□□□ -1.84
CHMP1AQ9HD42 RNU6-528P-201ENST00000516926 100 ntBASIC3.55□□□□□ -1.84
CHMP1AQ9HD42 RNA5SP143-201ENST00000516936 115 ntBASIC3.55□□□□□ -1.84
CHMP1AQ9HD42 AC106038.2-201ENST00000520706 568 ntBASIC3.55□□□□□ -1.84
CHMP1AQ9HD42 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC3.55□□□□□ -1.84
CHMP1AQ9HD42 AC084783.1-201ENST00000565846 910 ntBASIC3.55□□□□□ -1.84
CHMP1AQ9HD42 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.55□□□□□ -1.84
CHMP1AQ9HD42 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.55□□□□□ -1.84
CHMP1AQ9HD42 MIR3690-201ENST00000580266 75 ntBASIC3.55□□□□□ -1.84
CHMP1AQ9HD42 MIR4307-201ENST00000582802 84 ntBASIC3.55□□□□□ -1.84
CHMP1AQ9HD42 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.55□□□□□ -1.84
CHMP1AQ9HD42 AC013244.1-201ENST00000604279 193 ntBASIC3.55□□□□□ -1.84
CHMP1AQ9HD42 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.55□□□□□ -1.84
CHMP1AQ9HD42 AC012409.3-201ENST00000611343 981 ntBASIC3.55□□□□□ -1.84
CHMP1AQ9HD42 AC064801.1-201ENST00000612025 407 ntBASIC3.55□□□□□ -1.84
CHMP1AQ9HD42 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC3.55□□□□□ -1.84
CHMP1AQ9HD42 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.55□□□□□ -1.84
CHMP1AQ9HD42 AC091931.1-201ENST00000623488 728 ntBASIC3.55□□□□□ -1.84
CHMP1AQ9HD42 AC112200.1-201ENST00000625015 234 ntBASIC3.55□□□□□ -1.84
CHMP1AQ9HD42 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.55□□□□□ -1.84
CHMP1AQ9HD42 AC127502.3-201ENST00000636170 1206 ntBASIC3.55□□□□□ -1.84
CHMP1AQ9HD42 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
CHMP1AQ9HD42 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
CHMP1AQ9HD42 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.54□□□□□ -1.84
CHMP1AQ9HD42 OR56B2P-202ENST00000641377 2453 ntBASIC3.54□□□□□ -1.84
CHMP1AQ9HD42 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CHMP1AQ9HD42 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.54□□□□□ -1.84
CHMP1AQ9HD42 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CHMP1AQ9HD42 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
CHMP1AQ9HD42 RNU6-501P-201ENST00000364072 100 ntBASIC3.54□□□□□ -1.84
CHMP1AQ9HD42 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
CHMP1AQ9HD42 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
CHMP1AQ9HD42 MIR550A3-201ENST00000390735 95 ntBASIC3.54□□□□□ -1.84
CHMP1AQ9HD42 PTMAP5-201ENST00000393073 333 ntBASIC3.54□□□□□ -1.84
CHMP1AQ9HD42 RPS3AP26-201ENST00000398259 784 ntBASIC3.54□□□□□ -1.84
CHMP1AQ9HD42 AC025750.1-201ENST00000399891 379 ntBASIC3.54□□□□□ -1.84
CHMP1AQ9HD42 SNORA11F-201ENST00000408237 128 ntBASIC3.54□□□□□ -1.84
CHMP1AQ9HD42 RNA5SP36-201ENST00000410197 133 ntBASIC3.54□□□□□ -1.84
CHMP1AQ9HD42 RPL7P8-201ENST00000411964 730 ntBASIC3.54□□□□□ -1.84
CHMP1AQ9HD42 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.54□□□□□ -1.84
CHMP1AQ9HD42 AC009237.5-201ENST00000414271 501 ntBASIC3.54□□□□□ -1.84
CHMP1AQ9HD42 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC3.54□□□□□ -1.84
CHMP1AQ9HD42 AC090960.1-201ENST00000421072 306 ntBASIC3.54□□□□□ -1.84
CHMP1AQ9HD42 RPS27AP7-201ENST00000422792 455 ntBASIC3.54□□□□□ -1.84
CHMP1AQ9HD42 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CHMP1AQ9HD42 DUTP6-201ENST00000425573 462 ntBASIC3.54□□□□□ -1.84
CHMP1AQ9HD42 AL390023.1-201ENST00000428836 262 ntBASIC3.54□□□□□ -1.84
CHMP1AQ9HD42 VDAC1P3-201ENST00000434069 851 ntBASIC3.54□□□□□ -1.84
CHMP1AQ9HD42 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.54□□□□□ -1.84
CHMP1AQ9HD42 ISCA1P2-201ENST00000438679 421 ntBASIC3.54□□□□□ -1.84
CHMP1AQ9HD42 RPL23AP52-201ENST00000439311 478 ntBASIC3.54□□□□□ -1.84
CHMP1AQ9HD42 AL512326.1-201ENST00000443050 721 ntBASIC3.54□□□□□ -1.84
CHMP1AQ9HD42 FAM103A2P-201ENST00000444122 354 ntBASIC3.54□□□□□ -1.84
CHMP1AQ9HD42 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC3.54□□□□□ -1.84
CHMP1AQ9HD42 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC3.54□□□□□ -1.84
CHMP1AQ9HD42 AC010655.1-201ENST00000449336 292 ntBASIC3.54□□□□□ -1.84
CHMP1AQ9HD42 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.54□□□□□ -1.84
CHMP1AQ9HD42 RPL23AP81-201ENST00000455252 467 ntBASIC3.54□□□□□ -1.84
CHMP1AQ9HD42 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.54□□□□□ -1.84
CHMP1AQ9HD42 RN7SL330P-201ENST00000469709 307 ntBASIC3.54□□□□□ -1.84
CHMP1AQ9HD42 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.54□□□□□ -1.84
CHMP1AQ9HD42 AC109486.1-201ENST00000486833 374 ntBASIC3.54□□□□□ -1.84
CHMP1AQ9HD42 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.54□□□□□ -1.84
CHMP1AQ9HD42 BNIP3P41-201ENST00000503774 571 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms