Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 AC007318.2-201ENST00000620999 243 ntBASIC2.65□□□□□ -1.99
SLIRPQ9GZT3 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.65□□□□□ -1.99
SLIRPQ9GZT3 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.65□□□□□ -1.99
SLIRPQ9GZT3 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
SLIRPQ9GZT3 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.64□□□□□ -1.99
SLIRPQ9GZT3 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
SLIRPQ9GZT3 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.64□□□□□ -1.99
SLIRPQ9GZT3 SPRR2C-201ENST00000290702 219 ntBASIC2.64□□□□□ -1.99
SLIRPQ9GZT3 OR5H2-201ENST00000355273 945 ntBASIC2.64□□□□□ -1.99
SLIRPQ9GZT3 RNU1-35P-201ENST00000362782 153 ntBASIC2.64□□□□□ -1.99
SLIRPQ9GZT3 AL133264.1-201ENST00000407157 562 ntBASIC2.64□□□□□ -1.99
SLIRPQ9GZT3 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.64□□□□□ -1.99
SLIRPQ9GZT3 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.64□□□□□ -1.99
SLIRPQ9GZT3 BOLA3P4-201ENST00000418151 400 ntBASIC2.64□□□□□ -1.99
SLIRPQ9GZT3 AL035423.1-201ENST00000420331 213 ntBASIC2.64□□□□□ -1.99
SLIRPQ9GZT3 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC2.64□□□□□ -1.99
SLIRPQ9GZT3 RAC1P8-201ENST00000427086 527 ntBASIC2.64□□□□□ -1.99
SLIRPQ9GZT3 MTCYBP32-201ENST00000427945 1084 ntBASIC2.64□□□□□ -1.99
SLIRPQ9GZT3 AC122718.1-201ENST00000439448 744 ntBASIC2.64□□□□□ -1.99
SLIRPQ9GZT3 AP000705.1-201ENST00000454567 350 ntBASIC2.64□□□□□ -1.99
SLIRPQ9GZT3 ARPC3P2-201ENST00000457786 533 ntBASIC2.64□□□□□ -1.99
SLIRPQ9GZT3 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.64□□□□□ -1.99
SLIRPQ9GZT3 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
SLIRPQ9GZT3 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.64□□□□□ -1.99
SLIRPQ9GZT3 AC098799.2-201ENST00000509466 868 ntBASIC2.64□□□□□ -1.99
SLIRPQ9GZT3 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC2.64□□□□□ -1.99
SLIRPQ9GZT3 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC2.64□□□□□ -1.99
SLIRPQ9GZT3 CDH12P4-201ENST00000517835 295 ntBASIC2.64□□□□□ -1.99
SLIRPQ9GZT3 CDH12P3-201ENST00000517935 295 ntBASIC2.64□□□□□ -1.99
SLIRPQ9GZT3 CDH12P1-201ENST00000518435 295 ntBASIC2.64□□□□□ -1.99
SLIRPQ9GZT3 HMGB1P41-201ENST00000520234 440 ntBASIC2.64□□□□□ -1.99
SLIRPQ9GZT3 AC019227.1-201ENST00000526902 510 ntBASIC2.64□□□□□ -1.99
SLIRPQ9GZT3 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.64□□□□□ -1.99
SLIRPQ9GZT3 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
SLIRPQ9GZT3 RPL21P12-201ENST00000559810 515 ntBASIC2.64□□□□□ -1.99
SLIRPQ9GZT3 MIR3670-2-201ENST00000582974 65 ntBASIC2.64□□□□□ -1.99
SLIRPQ9GZT3 MIR3670-1-201ENST00000584160 65 ntBASIC2.64□□□□□ -1.99
SLIRPQ9GZT3 MIR3670-3-201ENST00000584855 65 ntBASIC2.64□□□□□ -1.99
SLIRPQ9GZT3 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC2.64□□□□□ -1.99
SLIRPQ9GZT3 AC012669.1-201ENST00000603209 283 ntBASIC2.64□□□□□ -1.99
SLIRPQ9GZT3 AP003973.1-201ENST00000604639 691 ntBASIC2.64□□□□□ -1.99
SLIRPQ9GZT3 AC073657.2-201ENST00000605661 303 ntBASIC2.64□□□□□ -1.99
SLIRPQ9GZT3 AP000238.1-201ENST00000608759 426 ntBASIC2.64□□□□□ -1.99
SLIRPQ9GZT3 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.64□□□□□ -1.99
SLIRPQ9GZT3 AL445423.1-201ENST00000609941 536 ntBASIC2.64□□□□□ -1.99
SLIRPQ9GZT3 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
SLIRPQ9GZT3 MIR3670-4-201ENST00000612260 65 ntBASIC2.64□□□□□ -1.99
SLIRPQ9GZT3 AC008759.3-201ENST00000613300 508 ntBASIC2.64□□□□□ -1.99
SLIRPQ9GZT3 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC2.64□□□□□ -1.99
SLIRPQ9GZT3 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC2.64□□□□□ -1.99
SLIRPQ9GZT3 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC2.64□□□□□ -1.99
SLIRPQ9GZT3 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.64□□□□□ -1.99
SLIRPQ9GZT3 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.64□□□□□ -1.99
SLIRPQ9GZT3 GDI2P1-201ENST00000429312 1336 ntBASIC2.64□□□□□ -1.99
SLIRPQ9GZT3 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
SLIRPQ9GZT3 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
SLIRPQ9GZT3 SGO1P2-201ENST00000429458 1589 ntBASIC2.63□□□□□ -1.99
SLIRPQ9GZT3 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
SLIRPQ9GZT3 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC2.63□□□□□ -1.99
SLIRPQ9GZT3 CYCSP45-201ENST00000402289 315 ntBASIC2.63□□□□□ -1.99
SLIRPQ9GZT3 U3.42-201ENST00000408746 214 ntBASIC2.63□□□□□ -1.99
SLIRPQ9GZT3 HMGN1P24-201ENST00000412282 298 ntBASIC2.63□□□□□ -1.99
SLIRPQ9GZT3 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.63□□□□□ -1.99
SLIRPQ9GZT3 AC092634.6-201ENST00000418558 192 ntBASIC2.63□□□□□ -1.99
SLIRPQ9GZT3 KRR1P1-201ENST00000419430 803 ntBASIC2.63□□□□□ -1.99
SLIRPQ9GZT3 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC2.63□□□□□ -1.99
SLIRPQ9GZT3 UBE2D3P2-201ENST00000424409 445 ntBASIC2.63□□□□□ -1.99
SLIRPQ9GZT3 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC2.63□□□□□ -1.99
SLIRPQ9GZT3 HIGD1AP11-201ENST00000438361 280 ntBASIC2.63□□□□□ -1.99
SLIRPQ9GZT3 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC2.63□□□□□ -1.99
SLIRPQ9GZT3 MTCO1P48-201ENST00000448024 1096 ntBASIC2.63□□□□□ -1.99
SLIRPQ9GZT3 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC2.63□□□□□ -1.99
SLIRPQ9GZT3 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC2.63□□□□□ -1.99
SLIRPQ9GZT3 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC2.63□□□□□ -1.99
SLIRPQ9GZT3 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
SLIRPQ9GZT3 AC017015.1-201ENST00000477387 286 ntBASIC2.63□□□□□ -1.99
SLIRPQ9GZT3 AC090525.1-201ENST00000479116 478 ntBASIC2.63□□□□□ -1.99
SLIRPQ9GZT3 VN1R105P-201ENST00000486595 910 ntBASIC2.63□□□□□ -1.99
SLIRPQ9GZT3 AP001025.2-201ENST00000490908 477 ntBASIC2.63□□□□□ -1.99
SLIRPQ9GZT3 KLRA1P-201ENST00000503499 986 ntBASIC2.63□□□□□ -1.99
SLIRPQ9GZT3 AC026414.1-201ENST00000504046 698 ntBASIC2.63□□□□□ -1.99
SLIRPQ9GZT3 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.63□□□□□ -1.99
SLIRPQ9GZT3 AC021678.1-201ENST00000505195 936 ntBASIC2.63□□□□□ -1.99
SLIRPQ9GZT3 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC2.63□□□□□ -1.99
SLIRPQ9GZT3 HMGN1P11-201ENST00000508668 303 ntBASIC2.63□□□□□ -1.99
SLIRPQ9GZT3 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
SLIRPQ9GZT3 SNORA31.8-201ENST00000516327 108 ntBASIC2.63□□□□□ -1.99
SLIRPQ9GZT3 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC2.63□□□□□ -1.99
SLIRPQ9GZT3 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.63□□□□□ -1.99
SLIRPQ9GZT3 AL163153.1-201ENST00000554223 283 ntBASIC2.63□□□□□ -1.99
SLIRPQ9GZT3 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.63□□□□□ -1.99
SLIRPQ9GZT3 RN7SL703P-201ENST00000578485 302 ntBASIC2.63□□□□□ -1.99
SLIRPQ9GZT3 MIR4276-201ENST00000584832 70 ntBASIC2.63□□□□□ -1.99
SLIRPQ9GZT3 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.63□□□□□ -1.99
SLIRPQ9GZT3 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC2.63□□□□□ -1.99
SLIRPQ9GZT3 AP001542.2-201ENST00000593141 364 ntBASIC2.63□□□□□ -1.99
SLIRPQ9GZT3 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC2.63□□□□□ -1.99
SLIRPQ9GZT3 BDH2P1-201ENST00000602288 736 ntBASIC2.63□□□□□ -1.99
SLIRPQ9GZT3 AC055876.5-201ENST00000605667 259 ntBASIC2.63□□□□□ -1.99
SLIRPQ9GZT3 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms