Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 RNU1-43P-201ENST00000365052 165 ntBASIC5.11□□□□□ -1.59
TRIM55Q9BYV6 Y_RNA.367-201ENST00000365544 101 ntBASIC5.11□□□□□ -1.59
TRIM55Q9BYV6 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
TRIM55Q9BYV6 RPL37P18-201ENST00000411602 243 ntBASIC5.11□□□□□ -1.59
TRIM55Q9BYV6 ZNF90P2-204ENST00000419323 1075 ntBASIC5.11□□□□□ -1.59
TRIM55Q9BYV6 AC099677.1-201ENST00000420575 175 ntBASIC5.11□□□□□ -1.59
TRIM55Q9BYV6 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.11□□□□□ -1.59
TRIM55Q9BYV6 SRSF1P1-201ENST00000424058 520 ntBASIC5.11□□□□□ -1.59
TRIM55Q9BYV6 USP9YP9-201ENST00000429406 715 ntBASIC5.11□□□□□ -1.59
TRIM55Q9BYV6 GTF2IP20-201ENST00000431663 360 ntBASIC5.11□□□□□ -1.59
TRIM55Q9BYV6 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.11□□□□□ -1.59
TRIM55Q9BYV6 RPL7AP61-201ENST00000443410 636 ntBASIC5.11□□□□□ -1.59
TRIM55Q9BYV6 GAPDHP25-201ENST00000447061 1001 ntBASIC5.11□□□□□ -1.59
TRIM55Q9BYV6 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.11□□□□□ -1.59
TRIM55Q9BYV6 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC5.11□□□□□ -1.59
TRIM55Q9BYV6 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC5.11□□□□□ -1.59
TRIM55Q9BYV6 CYCSP34-201ENST00000458172 304 ntBASIC5.11□□□□□ -1.59
TRIM55Q9BYV6 RN7SL97P-201ENST00000486780 299 ntBASIC5.11□□□□□ -1.59
TRIM55Q9BYV6 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM55Q9BYV6 RNU7-51P-201ENST00000516560 62 ntBASIC5.11□□□□□ -1.59
TRIM55Q9BYV6 RNU6-835P-201ENST00000516974 104 ntBASIC5.11□□□□□ -1.59
TRIM55Q9BYV6 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC5.11□□□□□ -1.59
TRIM55Q9BYV6 RPL23AP53-201ENST00000521854 457 ntBASIC5.11□□□□□ -1.59
TRIM55Q9BYV6 FAM60DP-201ENST00000524174 632 ntBASIC5.11□□□□□ -1.59
TRIM55Q9BYV6 AC018630.1-201ENST00000541376 925 ntBASIC5.11□□□□□ -1.59
TRIM55Q9BYV6 PDCD5P1-201ENST00000543528 309 ntBASIC5.11□□□□□ -1.59
TRIM55Q9BYV6 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM55Q9BYV6 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.11□□□□□ -1.59
TRIM55Q9BYV6 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC5.11□□□□□ -1.59
TRIM55Q9BYV6 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
TRIM55Q9BYV6 AC060780.3-201ENST00000589464 80 ntBASIC5.11□□□□□ -1.59
TRIM55Q9BYV6 AC010680.3-201ENST00000604215 520 ntBASIC5.11□□□□□ -1.59
TRIM55Q9BYV6 AL034351.1-201ENST00000605288 668 ntBASIC5.11□□□□□ -1.59
TRIM55Q9BYV6 AL121992.2-201ENST00000606262 256 ntBASIC5.11□□□□□ -1.59
TRIM55Q9BYV6 YWHAEP7-203ENST00000622054 312 ntBASIC5.11□□□□□ -1.59
TRIM55Q9BYV6 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM55Q9BYV6 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.11□□□□□ -1.59
TRIM55Q9BYV6 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM55Q9BYV6 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.11□□□□□ -1.59
TRIM55Q9BYV6 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM55Q9BYV6 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM55Q9BYV6 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.11□□□□□ -1.59
TRIM55Q9BYV6 AC107068.1-201ENST00000563286 4218 ntBASIC5.11□□□□□ -1.59
TRIM55Q9BYV6 MAPK10-320ENST00000641462 6696 ntBASIC5.1□□□□□ -1.59
TRIM55Q9BYV6 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM55Q9BYV6 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM55Q9BYV6 SNORA67-201ENST00000384423 137 ntBASIC5.1□□□□□ -1.59
TRIM55Q9BYV6 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM55Q9BYV6 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
TRIM55Q9BYV6 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM55Q9BYV6 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.1□□□□□ -1.59
TRIM55Q9BYV6 AL136372.1-201ENST00000403060 228 ntBASIC5.1□□□□□ -1.59
TRIM55Q9BYV6 AL133388.1-201ENST00000404509 287 ntBASIC5.1□□□□□ -1.59
TRIM55Q9BYV6 RNU2-36P-201ENST00000410361 191 ntBASIC5.1□□□□□ -1.59
TRIM55Q9BYV6 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.1□□□□□ -1.59
TRIM55Q9BYV6 RPL30P16-201ENST00000419341 429 ntBASIC5.1□□□□□ -1.59
TRIM55Q9BYV6 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC5.1□□□□□ -1.59
TRIM55Q9BYV6 OR2AS1P-201ENST00000427827 319 ntBASIC5.1□□□□□ -1.59
TRIM55Q9BYV6 MED13P1-201ENST00000428342 171 ntBASIC5.1□□□□□ -1.59
TRIM55Q9BYV6 SEPT14P3-201ENST00000439401 183 ntBASIC5.1□□□□□ -1.59
TRIM55Q9BYV6 AC016691.1-201ENST00000441321 413 ntBASIC5.1□□□□□ -1.59
TRIM55Q9BYV6 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
TRIM55Q9BYV6 AL732372.2-207ENST00000445840 183 ntBASIC5.1□□□□□ -1.59
TRIM55Q9BYV6 DDX10P1-201ENST00000448545 1933 ntBASIC5.1□□□□□ -1.59
TRIM55Q9BYV6 AL162389.1-201ENST00000449233 177 ntBASIC5.1□□□□□ -1.59
TRIM55Q9BYV6 SEPT14P2-201ENST00000453405 183 ntBASIC5.1□□□□□ -1.59
TRIM55Q9BYV6 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC5.1□□□□□ -1.59
TRIM55Q9BYV6 RNU6-261P-201ENST00000459506 102 ntBASIC5.1□□□□□ -1.59
TRIM55Q9BYV6 AC007537.2-201ENST00000472093 511 ntBASIC5.1□□□□□ -1.59
TRIM55Q9BYV6 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC5.1□□□□□ -1.59
TRIM55Q9BYV6 AC108043.1-201ENST00000512696 574 ntBASIC5.1□□□□□ -1.59
TRIM55Q9BYV6 SEPT14P4-201ENST00000513445 186 ntBASIC5.1□□□□□ -1.59
TRIM55Q9BYV6 SNORD27.1-201ENST00000516319 72 ntBASIC5.1□□□□□ -1.59
TRIM55Q9BYV6 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.1□□□□□ -1.59
TRIM55Q9BYV6 CDH12P4-201ENST00000517835 295 ntBASIC5.1□□□□□ -1.59
TRIM55Q9BYV6 CDH12P3-201ENST00000517935 295 ntBASIC5.1□□□□□ -1.59
TRIM55Q9BYV6 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC5.1□□□□□ -1.59
TRIM55Q9BYV6 CDH12P1-201ENST00000518435 295 ntBASIC5.1□□□□□ -1.59
TRIM55Q9BYV6 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC5.1□□□□□ -1.59
TRIM55Q9BYV6 HMGB1P41-201ENST00000520234 440 ntBASIC5.1□□□□□ -1.59
TRIM55Q9BYV6 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.1□□□□□ -1.59
TRIM55Q9BYV6 FO082796.1-201ENST00000523795 183 ntBASIC5.1□□□□□ -1.59
TRIM55Q9BYV6 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM55Q9BYV6 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC5.1□□□□□ -1.59
TRIM55Q9BYV6 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.1□□□□□ -1.59
TRIM55Q9BYV6 AC125611.2-201ENST00000551907 647 ntBASIC5.1□□□□□ -1.59
TRIM55Q9BYV6 AL121603.1-201ENST00000553815 142 ntBASIC5.1□□□□□ -1.59
TRIM55Q9BYV6 AL356489.2-201ENST00000566968 3528 ntBASIC5.1□□□□□ -1.59
TRIM55Q9BYV6 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.1□□□□□ -1.59
TRIM55Q9BYV6 MIR4646-201ENST00000580775 63 ntBASIC5.1□□□□□ -1.59
TRIM55Q9BYV6 AC090616.5-202ENST00000582111 297 ntBASIC5.1□□□□□ -1.59
TRIM55Q9BYV6 AC008814.1-201ENST00000603797 406 ntBASIC5.1□□□□□ -1.59
TRIM55Q9BYV6 EIF3FP1-201ENST00000613970 806 ntBASIC5.1□□□□□ -1.59
TRIM55Q9BYV6 TUG1_2.1-201ENST00000614234 87 ntBASIC5.1□□□□□ -1.59
TRIM55Q9BYV6 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
TRIM55Q9BYV6 AC243312.2-201ENST00000623340 601 ntBASIC5.1□□□□□ -1.59
TRIM55Q9BYV6 MIR3662-201ENST00000637030 95 ntBASIC5.1□□□□□ -1.59
TRIM55Q9BYV6 CASC19-280ENST00000642102 1351 ntBASIC5.1□□□□□ -1.59
TRIM55Q9BYV6 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
TRIM55Q9BYV6 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms