Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.52□□□□□ -1.69
NDC1Q9BTX1 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.52□□□□□ -1.69
NDC1Q9BTX1 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
NDC1Q9BTX1 SAGE4P-201ENST00000442271 3381 ntBASIC4.52□□□□□ -1.69
NDC1Q9BTX1 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
NDC1Q9BTX1 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
NDC1Q9BTX1 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.52□□□□□ -1.69
NDC1Q9BTX1 ZNF680P1-201ENST00000436625 1469 ntBASIC4.52□□□□□ -1.69
NDC1Q9BTX1 NMD3P1-201ENST00000439704 1488 ntBASIC4.52□□□□□ -1.69
NDC1Q9BTX1 AC006026.1-201ENST00000444025 1803 ntBASIC4.52□□□□□ -1.69
NDC1Q9BTX1 RNU5E-1-201ENST00000362477 120 ntBASIC4.52□□□□□ -1.69
NDC1Q9BTX1 Y_RNA.86-201ENST00000363020 111 ntBASIC4.52□□□□□ -1.69
NDC1Q9BTX1 RNU6-1322P-201ENST00000364309 107 ntBASIC4.52□□□□□ -1.69
NDC1Q9BTX1 Y_RNA.356-201ENST00000365475 113 ntBASIC4.52□□□□□ -1.69
NDC1Q9BTX1 Y_RNA.381-201ENST00000365666 102 ntBASIC4.52□□□□□ -1.69
NDC1Q9BTX1 RNU1-82P-201ENST00000390851 165 ntBASIC4.52□□□□□ -1.69
NDC1Q9BTX1 RN7SKP267-201ENST00000410381 285 ntBASIC4.52□□□□□ -1.69
NDC1Q9BTX1 RN7SKP106-201ENST00000410832 272 ntBASIC4.52□□□□□ -1.69
NDC1Q9BTX1 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.52□□□□□ -1.69
NDC1Q9BTX1 RPL36AP36-201ENST00000418616 301 ntBASIC4.52□□□□□ -1.69
NDC1Q9BTX1 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.52□□□□□ -1.69
NDC1Q9BTX1 SNRPEP10-201ENST00000420249 274 ntBASIC4.52□□□□□ -1.69
NDC1Q9BTX1 GNG5P5-201ENST00000420444 220 ntBASIC4.52□□□□□ -1.69
NDC1Q9BTX1 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC4.52□□□□□ -1.69
NDC1Q9BTX1 C4BPAP2-201ENST00000428434 478 ntBASIC4.52□□□□□ -1.69
NDC1Q9BTX1 OR51AB1P-201ENST00000429046 620 ntBASIC4.52□□□□□ -1.69
NDC1Q9BTX1 GTF2IP20-201ENST00000431663 360 ntBASIC4.52□□□□□ -1.69
NDC1Q9BTX1 AL359265.2-201ENST00000434367 631 ntBASIC4.52□□□□□ -1.69
NDC1Q9BTX1 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.52□□□□□ -1.69
NDC1Q9BTX1 CALM1P1-201ENST00000442082 433 ntBASIC4.52□□□□□ -1.69
NDC1Q9BTX1 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.52□□□□□ -1.69
NDC1Q9BTX1 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.52□□□□□ -1.69
NDC1Q9BTX1 RPL7P52-201ENST00000449200 742 ntBASIC4.52□□□□□ -1.69
NDC1Q9BTX1 SNRPGP6-201ENST00000451124 220 ntBASIC4.52□□□□□ -1.69
NDC1Q9BTX1 snoU13.8-201ENST00000458890 104 ntBASIC4.52□□□□□ -1.69
NDC1Q9BTX1 AP001992.1-205ENST00000462248 379 ntBASIC4.52□□□□□ -1.69
NDC1Q9BTX1 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.52□□□□□ -1.69
NDC1Q9BTX1 AC090686.1-201ENST00000481577 749 ntBASIC4.52□□□□□ -1.69
NDC1Q9BTX1 AC020890.1-201ENST00000491837 504 ntBASIC4.52□□□□□ -1.69
NDC1Q9BTX1 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.52□□□□□ -1.69
NDC1Q9BTX1 AC016065.2-201ENST00000514530 444 ntBASIC4.52□□□□□ -1.69
NDC1Q9BTX1 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.52□□□□□ -1.69
NDC1Q9BTX1 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.52□□□□□ -1.69
NDC1Q9BTX1 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.52□□□□□ -1.69
NDC1Q9BTX1 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.52□□□□□ -1.69
NDC1Q9BTX1 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.52□□□□□ -1.69
NDC1Q9BTX1 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.52□□□□□ -1.69
NDC1Q9BTX1 AL110118.1-201ENST00000553543 400 ntBASIC4.52□□□□□ -1.69
NDC1Q9BTX1 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.52□□□□□ -1.69
NDC1Q9BTX1 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.52□□□□□ -1.69
NDC1Q9BTX1 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.52□□□□□ -1.69
NDC1Q9BTX1 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.52□□□□□ -1.69
NDC1Q9BTX1 AC009101.1-201ENST00000568135 242 ntBASIC4.52□□□□□ -1.69
NDC1Q9BTX1 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.52□□□□□ -1.69
NDC1Q9BTX1 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.52□□□□□ -1.69
NDC1Q9BTX1 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.52□□□□□ -1.69
NDC1Q9BTX1 AC008782.1-201ENST00000603386 430 ntBASIC4.52□□□□□ -1.69
NDC1Q9BTX1 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.52□□□□□ -1.69
NDC1Q9BTX1 AC007038.2-201ENST00000608095 740 ntBASIC4.52□□□□□ -1.69
NDC1Q9BTX1 MIR7703-201ENST00000620784 77 ntBASIC4.52□□□□□ -1.69
NDC1Q9BTX1 SRP54-214ENST00000630962 162 ntTSL 5 BASIC4.52□□□□□ -1.69
NDC1Q9BTX1 AC112487.2-201ENST00000637950 304 ntBASIC4.52□□□□□ -1.69
NDC1Q9BTX1 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
NDC1Q9BTX1 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
NDC1Q9BTX1 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.52□□□□□ -1.69
NDC1Q9BTX1 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
NDC1Q9BTX1 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
NDC1Q9BTX1 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.52□□□□□ -1.69
NDC1Q9BTX1 Z95327.2-201ENST00000414579 1873 ntBASIC4.52□□□□□ -1.69
NDC1Q9BTX1 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
NDC1Q9BTX1 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
NDC1Q9BTX1 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.51□□□□□ -1.69
NDC1Q9BTX1 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.51□□□□□ -1.69
NDC1Q9BTX1 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
NDC1Q9BTX1 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.51□□□□□ -1.69
NDC1Q9BTX1 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
NDC1Q9BTX1 RNY3P3-201ENST00000363816 102 ntBASIC4.51□□□□□ -1.69
NDC1Q9BTX1 SNORA71.2-201ENST00000364941 134 ntBASIC4.51□□□□□ -1.69
NDC1Q9BTX1 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4.51□□□□□ -1.69
NDC1Q9BTX1 Z98745.1-201ENST00000402553 494 ntBASIC4.51□□□□□ -1.69
NDC1Q9BTX1 RPL31P2-201ENST00000413849 377 ntBASIC4.51□□□□□ -1.69
NDC1Q9BTX1 AL358176.3-201ENST00000420757 454 ntBASIC4.51□□□□□ -1.69
NDC1Q9BTX1 AC008850.1-201ENST00000427546 362 ntBASIC4.51□□□□□ -1.69
NDC1Q9BTX1 OR4F13P-201ENST00000428478 931 ntBASIC4.51□□□□□ -1.69
NDC1Q9BTX1 AC068287.1-201ENST00000430283 295 ntBASIC4.51□□□□□ -1.69
NDC1Q9BTX1 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.51□□□□□ -1.69
NDC1Q9BTX1 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.51□□□□□ -1.69
NDC1Q9BTX1 AL356276.2-201ENST00000435919 558 ntBASIC4.51□□□□□ -1.69
NDC1Q9BTX1 RPL12P46-201ENST00000436610 195 ntBASIC4.51□□□□□ -1.69
NDC1Q9BTX1 GEMIN8P3-201ENST00000445417 720 ntBASIC4.51□□□□□ -1.69
NDC1Q9BTX1 H2AFZP5-201ENST00000446960 382 ntBASIC4.51□□□□□ -1.69
NDC1Q9BTX1 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC4.51□□□□□ -1.69
NDC1Q9BTX1 FDX1P2-201ENST00000450769 375 ntBASIC4.51□□□□□ -1.69
NDC1Q9BTX1 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.51□□□□□ -1.69
NDC1Q9BTX1 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.51□□□□□ -1.69
NDC1Q9BTX1 PANCR-202ENST00000513690 448 ntTSL 2 BASIC4.51□□□□□ -1.69
NDC1Q9BTX1 AC093853.1-201ENST00000515689 483 ntBASIC4.51□□□□□ -1.69
NDC1Q9BTX1 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.51□□□□□ -1.69
NDC1Q9BTX1 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC4.51□□□□□ -1.69
NDC1Q9BTX1 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms