Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 ZNF415P1-201ENST00000582279 1166 ntBASIC4.72□□□□□ -1.65
CDK5RAP3Q96JB5 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.72□□□□□ -1.65
CDK5RAP3Q96JB5 DEFB131E-202ENST00000602581 683 ntBASIC4.72□□□□□ -1.65
CDK5RAP3Q96JB5 AC015871.2-201ENST00000603605 948 ntBASIC4.72□□□□□ -1.65
CDK5RAP3Q96JB5 HMGN2P28-201ENST00000606102 262 ntBASIC4.72□□□□□ -1.65
CDK5RAP3Q96JB5 AC138932.5-201ENST00000617759 563 ntBASIC4.72□□□□□ -1.65
CDK5RAP3Q96JB5 RMST_9.1-201ENST00000619945 193 ntBASIC4.72□□□□□ -1.65
CDK5RAP3Q96JB5 CRYM-AS1-204ENST00000637983 556 ntBASIC4.72□□□□□ -1.65
CDK5RAP3Q96JB5 AC105074.1-201ENST00000623380 3095 ntBASIC4.72□□□□□ -1.65
CDK5RAP3Q96JB5 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.72□□□□□ -1.65
CDK5RAP3Q96JB5 NUP58P1-201ENST00000502546 1738 ntBASIC4.72□□□□□ -1.65
CDK5RAP3Q96JB5 ZNF734P-201ENST00000419494 1534 ntBASIC4.72□□□□□ -1.65
CDK5RAP3Q96JB5 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
CDK5RAP3Q96JB5 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CDK5RAP3Q96JB5 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.72□□□□□ -1.65
CDK5RAP3Q96JB5 AC011266.1-201ENST00000624119 3569 ntBASIC4.71□□□□□ -1.65
CDK5RAP3Q96JB5 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.65
CDK5RAP3Q96JB5 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
CDK5RAP3Q96JB5 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
CDK5RAP3Q96JB5 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CDK5RAP3Q96JB5 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CDK5RAP3Q96JB5 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.71□□□□□ -1.66
CDK5RAP3Q96JB5 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.71□□□□□ -1.66
CDK5RAP3Q96JB5 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.66
CDK5RAP3Q96JB5 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CDK5RAP3Q96JB5 MIR383-201ENST00000362257 73 ntBASIC4.71□□□□□ -1.66
CDK5RAP3Q96JB5 RNU6-533P-201ENST00000384144 107 ntBASIC4.71□□□□□ -1.66
CDK5RAP3Q96JB5 MTCYBP24-201ENST00000420387 1106 ntBASIC4.71□□□□□ -1.66
CDK5RAP3Q96JB5 B3GALNT1P1-201ENST00000420569 975 ntBASIC4.71□□□□□ -1.66
CDK5RAP3Q96JB5 EIF4EP1-201ENST00000422311 642 ntBASIC4.71□□□□□ -1.66
CDK5RAP3Q96JB5 AL513174.1-201ENST00000423182 629 ntBASIC4.71□□□□□ -1.66
CDK5RAP3Q96JB5 RPL23AP38-201ENST00000423801 469 ntBASIC4.71□□□□□ -1.66
CDK5RAP3Q96JB5 RPS27AP12-201ENST00000429552 465 ntBASIC4.71□□□□□ -1.66
CDK5RAP3Q96JB5 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.71□□□□□ -1.66
CDK5RAP3Q96JB5 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC4.71□□□□□ -1.66
CDK5RAP3Q96JB5 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.71□□□□□ -1.66
CDK5RAP3Q96JB5 RPL7P36-201ENST00000444633 681 ntBASIC4.71□□□□□ -1.66
CDK5RAP3Q96JB5 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.71□□□□□ -1.66
CDK5RAP3Q96JB5 MTND1P27-201ENST00000451117 902 ntBASIC4.71□□□□□ -1.66
CDK5RAP3Q96JB5 HMGB1P15-201ENST00000453854 435 ntBASIC4.71□□□□□ -1.66
CDK5RAP3Q96JB5 RAD23BP3-201ENST00000454157 1152 ntBASIC4.71□□□□□ -1.66
CDK5RAP3Q96JB5 SNRPFP4-201ENST00000456366 242 ntBASIC4.71□□□□□ -1.66
CDK5RAP3Q96JB5 TPT1P7-201ENST00000458300 517 ntBASIC4.71□□□□□ -1.66
CDK5RAP3Q96JB5 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.71□□□□□ -1.66
CDK5RAP3Q96JB5 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.71□□□□□ -1.66
CDK5RAP3Q96JB5 MTCO3P44-201ENST00000510977 541 ntBASIC4.71□□□□□ -1.66
CDK5RAP3Q96JB5 AC010625.1-201ENST00000511296 403 ntBASIC4.71□□□□□ -1.66
CDK5RAP3Q96JB5 OR4R3P-201ENST00000525084 838 ntBASIC4.71□□□□□ -1.66
CDK5RAP3Q96JB5 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CDK5RAP3Q96JB5 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.71□□□□□ -1.66
CDK5RAP3Q96JB5 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC4.71□□□□□ -1.66
CDK5RAP3Q96JB5 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC4.71□□□□□ -1.66
CDK5RAP3Q96JB5 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC4.71□□□□□ -1.66
CDK5RAP3Q96JB5 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.71□□□□□ -1.66
CDK5RAP3Q96JB5 AC080078.2-201ENST00000603766 501 ntBASIC4.71□□□□□ -1.66
CDK5RAP3Q96JB5 AC112230.1-201ENST00000604342 547 ntBASIC4.71□□□□□ -1.66
CDK5RAP3Q96JB5 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CDK5RAP3Q96JB5 ARF4P1-201ENST00000605447 541 ntBASIC4.71□□□□□ -1.66
CDK5RAP3Q96JB5 MIR432-201ENST00000606207 94 ntBASIC4.71□□□□□ -1.66
CDK5RAP3Q96JB5 AC092354.2-201ENST00000607786 514 ntBASIC4.71□□□□□ -1.66
CDK5RAP3Q96JB5 SNX18P1Y-201ENST00000616231 511 ntBASIC4.71□□□□□ -1.66
CDK5RAP3Q96JB5 AC073968.1-201ENST00000618594 637 ntBASIC4.71□□□□□ -1.66
CDK5RAP3Q96JB5 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.71□□□□□ -1.66
CDK5RAP3Q96JB5 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CDK5RAP3Q96JB5 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CDK5RAP3Q96JB5 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CDK5RAP3Q96JB5 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CDK5RAP3Q96JB5 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.7□□□□□ -1.66
CDK5RAP3Q96JB5 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
CDK5RAP3Q96JB5 MTND5P29-201ENST00000458676 1807 ntBASIC4.7□□□□□ -1.66
CDK5RAP3Q96JB5 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CDK5RAP3Q96JB5 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CDK5RAP3Q96JB5 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC4.7□□□□□ -1.66
CDK5RAP3Q96JB5 MT-TC-201ENST00000387405 66 ntBASIC4.7□□□□□ -1.66
CDK5RAP3Q96JB5 OR6C69P-201ENST00000394268 893 ntBASIC4.7□□□□□ -1.66
CDK5RAP3Q96JB5 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
CDK5RAP3Q96JB5 MTND4LP20-201ENST00000402379 270 ntBASIC4.7□□□□□ -1.66
CDK5RAP3Q96JB5 Y_RNA.599-201ENST00000410489 109 ntBASIC4.7□□□□□ -1.66
CDK5RAP3Q96JB5 HMGN1P14-201ENST00000412459 517 ntBASIC4.7□□□□□ -1.66
CDK5RAP3Q96JB5 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC4.7□□□□□ -1.66
CDK5RAP3Q96JB5 MTND1P34-201ENST00000438556 671 ntBASIC4.7□□□□□ -1.66
CDK5RAP3Q96JB5 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC4.7□□□□□ -1.66
CDK5RAP3Q96JB5 SDCBPP1-201ENST00000440192 890 ntBASIC4.7□□□□□ -1.66
CDK5RAP3Q96JB5 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.7□□□□□ -1.66
CDK5RAP3Q96JB5 AL590365.1-201ENST00000450788 243 ntBASIC4.7□□□□□ -1.66
CDK5RAP3Q96JB5 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.7□□□□□ -1.66
CDK5RAP3Q96JB5 RPS20P32-201ENST00000456044 356 ntBASIC4.7□□□□□ -1.66
CDK5RAP3Q96JB5 MTCO1P42-201ENST00000457379 726 ntBASIC4.7□□□□□ -1.66
CDK5RAP3Q96JB5 HMGB3P30-201ENST00000457863 606 ntBASIC4.7□□□□□ -1.66
CDK5RAP3Q96JB5 UQCRHP4-201ENST00000471686 272 ntBASIC4.7□□□□□ -1.66
CDK5RAP3Q96JB5 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
CDK5RAP3Q96JB5 AC041039.1-201ENST00000485656 536 ntBASIC4.7□□□□□ -1.66
CDK5RAP3Q96JB5 AP001025.2-201ENST00000490908 477 ntBASIC4.7□□□□□ -1.66
CDK5RAP3Q96JB5 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
CDK5RAP3Q96JB5 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
CDK5RAP3Q96JB5 AC017037.1-201ENST00000508460 471 ntBASIC4.7□□□□□ -1.66
CDK5RAP3Q96JB5 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.7□□□□□ -1.66
CDK5RAP3Q96JB5 RNU6-405P-201ENST00000516637 110 ntBASIC4.7□□□□□ -1.66
CDK5RAP3Q96JB5 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC4.7□□□□□ -1.66
CDK5RAP3Q96JB5 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms