Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AC010469.2-201ENST00000496412 480 ntBASIC6.55□□□□□ -1.36
LRCH3Q96II8 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.55□□□□□ -1.36
LRCH3Q96II8 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC6.55□□□□□ -1.36
LRCH3Q96II8 RNU6-84P-201ENST00000607737 102 ntBASIC6.55□□□□□ -1.36
LRCH3Q96II8 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.55□□□□□ -1.36
LRCH3Q96II8 AL352984.2-202ENST00000613699 155 ntBASIC6.55□□□□□ -1.36
LRCH3Q96II8 AL445647.2-201ENST00000615170 130 ntBASIC6.55□□□□□ -1.36
LRCH3Q96II8 U1.34-201ENST00000618578 162 ntBASIC6.55□□□□□ -1.36
LRCH3Q96II8 AC091895.1-201ENST00000624494 256 ntBASIC6.55□□□□□ -1.36
LRCH3Q96II8 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
LRCH3Q96II8 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
LRCH3Q96II8 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.55□□□□□ -1.36
LRCH3Q96II8 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
LRCH3Q96II8 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
LRCH3Q96II8 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC6.55□□□□□ -1.36
LRCH3Q96II8 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
LRCH3Q96II8 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.55□□□□□ -1.36
LRCH3Q96II8 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
LRCH3Q96II8 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
LRCH3Q96II8 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6.54□□□□□ -1.36
LRCH3Q96II8 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
LRCH3Q96II8 AL662795.2-201ENST00000624252 3706 ntBASIC6.54□□□□□ -1.36
LRCH3Q96II8 AC008725.1-201ENST00000605123 2263 ntBASIC6.54□□□□□ -1.36
LRCH3Q96II8 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
LRCH3Q96II8 RPL23P2-201ENST00000320371 421 ntBASIC6.54□□□□□ -1.36
LRCH3Q96II8 RNU6-1284P-201ENST00000363701 100 ntBASIC6.54□□□□□ -1.36
LRCH3Q96II8 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
LRCH3Q96II8 Y_RNA.497-201ENST00000384447 98 ntBASIC6.54□□□□□ -1.36
LRCH3Q96II8 RNU6-225P-201ENST00000384613 103 ntBASIC6.54□□□□□ -1.36
LRCH3Q96II8 SNORD73A-201ENST00000386062 65 ntBASIC6.54□□□□□ -1.36
LRCH3Q96II8 AC006946.1-201ENST00000429106 328 ntBASIC6.54□□□□□ -1.36
LRCH3Q96II8 MTND3P9-201ENST00000429526 346 ntBASIC6.54□□□□□ -1.36
LRCH3Q96II8 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC6.54□□□□□ -1.36
LRCH3Q96II8 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.54□□□□□ -1.36
LRCH3Q96II8 AL591704.1-201ENST00000432574 275 ntBASIC6.54□□□□□ -1.36
LRCH3Q96II8 PPIAP13-201ENST00000434706 478 ntBASIC6.54□□□□□ -1.36
LRCH3Q96II8 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC6.54□□□□□ -1.36
LRCH3Q96II8 RPL23AP81-201ENST00000455252 467 ntBASIC6.54□□□□□ -1.36
LRCH3Q96II8 RPS29P33-201ENST00000456717 146 ntBASIC6.54□□□□□ -1.36
LRCH3Q96II8 AC100832.1-201ENST00000471945 383 ntBASIC6.54□□□□□ -1.36
LRCH3Q96II8 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC6.54□□□□□ -1.36
LRCH3Q96II8 AC135721.1-201ENST00000497954 479 ntBASIC6.54□□□□□ -1.36
LRCH3Q96II8 AC074250.1-201ENST00000511117 192 ntBASIC6.54□□□□□ -1.36
LRCH3Q96II8 AC074133.1-201ENST00000515696 183 ntBASIC6.54□□□□□ -1.36
LRCH3Q96II8 SNORD116-28-201ENST00000516123 91 ntBASIC6.54□□□□□ -1.36
LRCH3Q96II8 AC073581.1-201ENST00000519036 575 ntBASIC6.54□□□□□ -1.36
LRCH3Q96II8 AC010186.2-204ENST00000537668 439 ntBASIC6.54□□□□□ -1.36
LRCH3Q96II8 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.54□□□□□ -1.36
LRCH3Q96II8 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC6.54□□□□□ -1.36
LRCH3Q96II8 MIR5701-3-201ENST00000578890 82 ntBASIC6.54□□□□□ -1.36
LRCH3Q96II8 MIR4480-201ENST00000582492 71 ntBASIC6.54□□□□□ -1.36
LRCH3Q96II8 MIR5701-1-201ENST00000585138 82 ntBASIC6.54□□□□□ -1.36
LRCH3Q96II8 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC6.54□□□□□ -1.36
LRCH3Q96II8 AC012119.1-201ENST00000603184 222 ntBASIC6.54□□□□□ -1.36
LRCH3Q96II8 AL670379.6-201ENST00000603753 252 ntBASIC6.54□□□□□ -1.36
LRCH3Q96II8 AL670379.1-201ENST00000604752 252 ntBASIC6.54□□□□□ -1.36
LRCH3Q96II8 AL670379.5-201ENST00000605253 252 ntBASIC6.54□□□□□ -1.36
LRCH3Q96II8 AL670379.8-201ENST00000605353 252 ntBASIC6.54□□□□□ -1.36
LRCH3Q96II8 AL670379.7-201ENST00000605823 252 ntBASIC6.54□□□□□ -1.36
LRCH3Q96II8 AC141002.1-201ENST00000607025 279 ntBASIC6.54□□□□□ -1.36
LRCH3Q96II8 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC6.54□□□□□ -1.36
LRCH3Q96II8 MIR5701-2-201ENST00000615634 82 ntBASIC6.54□□□□□ -1.36
LRCH3Q96II8 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC6.54□□□□□ -1.36
LRCH3Q96II8 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
LRCH3Q96II8 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
LRCH3Q96II8 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC6.54□□□□□ -1.36
LRCH3Q96II8 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
LRCH3Q96II8 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.54□□□□□ -1.36
LRCH3Q96II8 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
LRCH3Q96II8 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.54□□□□□ -1.36
LRCH3Q96II8 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
LRCH3Q96II8 TEK-204ENST00000519097 3836 ntTSL 2 BASIC6.54□□□□□ -1.36
LRCH3Q96II8 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
LRCH3Q96II8 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
LRCH3Q96II8 AC074141.1-201ENST00000588129 2995 ntBASIC6.54□□□□□ -1.36
LRCH3Q96II8 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
LRCH3Q96II8 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
LRCH3Q96II8 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.53□□□□□ -1.36
LRCH3Q96II8 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
LRCH3Q96II8 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
LRCH3Q96II8 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
LRCH3Q96II8 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC6.53□□□□□ -1.36
LRCH3Q96II8 RNU4-44P-201ENST00000363050 141 ntBASIC6.53□□□□□ -1.36
LRCH3Q96II8 SNRPEP6-201ENST00000407465 277 ntBASIC6.53□□□□□ -1.36
LRCH3Q96II8 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.53□□□□□ -1.36
LRCH3Q96II8 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.53□□□□□ -1.36
LRCH3Q96II8 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC6.53□□□□□ -1.36
LRCH3Q96II8 AC093414.1-201ENST00000434712 514 ntBASIC6.53□□□□□ -1.36
LRCH3Q96II8 PRDX3P3-201ENST00000447765 522 ntBASIC6.53□□□□□ -1.36
LRCH3Q96II8 RPS17P13-201ENST00000448974 407 ntBASIC6.53□□□□□ -1.36
LRCH3Q96II8 RBMY2TP-201ENST00000451162 947 ntBASIC6.53□□□□□ -1.36
LRCH3Q96II8 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6.53□□□□□ -1.36
LRCH3Q96II8 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
LRCH3Q96II8 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC6.53□□□□□ -1.36
LRCH3Q96II8 RPS27P26-201ENST00000494583 239 ntBASIC6.53□□□□□ -1.36
LRCH3Q96II8 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC6.53□□□□□ -1.36
LRCH3Q96II8 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC6.53□□□□□ -1.36
LRCH3Q96II8 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.53□□□□□ -1.36
LRCH3Q96II8 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC6.53□□□□□ -1.36
LRCH3Q96II8 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms