Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC4.67□□□□□ -1.66
CHFRQ96EP1 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC4.67□□□□□ -1.66
CHFRQ96EP1 OR4A45P-201ENST00000529954 901 ntBASIC4.67□□□□□ -1.66
CHFRQ96EP1 TRAV8-5-201ENST00000537369 341 ntBASIC4.67□□□□□ -1.66
CHFRQ96EP1 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.67□□□□□ -1.66
CHFRQ96EP1 HIF1AP1-201ENST00000553642 175 ntBASIC4.67□□□□□ -1.66
CHFRQ96EP1 AC074050.1-201ENST00000563247 211 ntBASIC4.67□□□□□ -1.66
CHFRQ96EP1 MIR1254-2-201ENST00000579553 63 ntBASIC4.67□□□□□ -1.66
CHFRQ96EP1 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC4.67□□□□□ -1.66
CHFRQ96EP1 AC006504.6-201ENST00000590142 199 ntBASIC4.67□□□□□ -1.66
CHFRQ96EP1 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC4.67□□□□□ -1.66
CHFRQ96EP1 BNIP3P8-201ENST00000597863 560 ntBASIC4.67□□□□□ -1.66
CHFRQ96EP1 VN1R107P-201ENST00000601784 209 ntBASIC4.67□□□□□ -1.66
CHFRQ96EP1 AC090425.1-201ENST00000610007 140 ntBASIC4.67□□□□□ -1.66
CHFRQ96EP1 AC008250.2-201ENST00000615261 205 ntBASIC4.67□□□□□ -1.66
CHFRQ96EP1 AL139089.1-201ENST00000620372 975 ntBASIC4.67□□□□□ -1.66
CHFRQ96EP1 AL158801.5-201ENST00000623123 465 ntBASIC4.67□□□□□ -1.66
CHFRQ96EP1 PNPT1P2-201ENST00000456768 2050 ntBASIC4.67□□□□□ -1.66
CHFRQ96EP1 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.67□□□□□ -1.66
CHFRQ96EP1 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CHFRQ96EP1 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.67□□□□□ -1.66
CHFRQ96EP1 AL136964.1-201ENST00000622038 2990 ntBASIC4.67□□□□□ -1.66
CHFRQ96EP1 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.67□□□□□ -1.66
CHFRQ96EP1 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.67□□□□□ -1.66
CHFRQ96EP1 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
CHFRQ96EP1 MTND5P16-201ENST00000460269 1703 ntBASIC4.66□□□□□ -1.66
CHFRQ96EP1 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CHFRQ96EP1 AC007390.2-201ENST00000606229 3803 ntBASIC4.66□□□□□ -1.66
CHFRQ96EP1 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.66□□□□□ -1.66
CHFRQ96EP1 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CHFRQ96EP1 AL391684.1-202ENST00000641293 1636 ntBASIC4.66□□□□□ -1.66
CHFRQ96EP1 Y_RNA.146-201ENST00000363549 102 ntBASIC4.66□□□□□ -1.66
CHFRQ96EP1 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CHFRQ96EP1 Y_RNA.431-201ENST00000384086 102 ntBASIC4.66□□□□□ -1.66
CHFRQ96EP1 AC018630.2-202ENST00000422992 927 ntBASIC4.66□□□□□ -1.66
CHFRQ96EP1 RPS12P10-201ENST00000427031 377 ntBASIC4.66□□□□□ -1.66
CHFRQ96EP1 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.66□□□□□ -1.66
CHFRQ96EP1 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.66□□□□□ -1.66
CHFRQ96EP1 CBX1P4-201ENST00000439415 457 ntBASIC4.66□□□□□ -1.66
CHFRQ96EP1 COX6CP18-201ENST00000448769 222 ntBASIC4.66□□□□□ -1.66
CHFRQ96EP1 FABP3P2-201ENST00000453169 399 ntBASIC4.66□□□□□ -1.66
CHFRQ96EP1 AL590639.1-201ENST00000456484 337 ntBASIC4.66□□□□□ -1.66
CHFRQ96EP1 RN7SL98P-201ENST00000462271 300 ntBASIC4.66□□□□□ -1.66
CHFRQ96EP1 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.66□□□□□ -1.66
CHFRQ96EP1 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CHFRQ96EP1 AC091167.1-201ENST00000492017 396 ntBASIC4.66□□□□□ -1.66
CHFRQ96EP1 RN7SL810P-201ENST00000493031 276 ntBASIC4.66□□□□□ -1.66
CHFRQ96EP1 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC4.66□□□□□ -1.66
CHFRQ96EP1 AC017037.1-201ENST00000508460 471 ntBASIC4.66□□□□□ -1.66
CHFRQ96EP1 AC104108.1-201ENST00000509930 412 ntBASIC4.66□□□□□ -1.66
CHFRQ96EP1 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC4.66□□□□□ -1.66
CHFRQ96EP1 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC4.66□□□□□ -1.66
CHFRQ96EP1 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC4.66□□□□□ -1.66
CHFRQ96EP1 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.66□□□□□ -1.66
CHFRQ96EP1 SNORA31.9-201ENST00000516429 84 ntBASIC4.66□□□□□ -1.66
CHFRQ96EP1 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.66□□□□□ -1.66
CHFRQ96EP1 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.66□□□□□ -1.66
CHFRQ96EP1 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.66□□□□□ -1.66
CHFRQ96EP1 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.66□□□□□ -1.66
CHFRQ96EP1 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.66□□□□□ -1.66
CHFRQ96EP1 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.66□□□□□ -1.66
CHFRQ96EP1 MIR3171-201ENST00000584270 74 ntBASIC4.66□□□□□ -1.66
CHFRQ96EP1 AC011712.1-201ENST00000588959 234 ntBASIC4.66□□□□□ -1.66
CHFRQ96EP1 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC4.66□□□□□ -1.66
CHFRQ96EP1 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.66□□□□□ -1.66
CHFRQ96EP1 NRBF2P5-201ENST00000603087 788 ntBASIC4.66□□□□□ -1.66
CHFRQ96EP1 AL136363.1-201ENST00000605349 337 ntBASIC4.66□□□□□ -1.66
CHFRQ96EP1 AC091979.2-201ENST00000607514 214 ntBASIC4.66□□□□□ -1.66
CHFRQ96EP1 AC105429.2-201ENST00000610567 517 ntBASIC4.66□□□□□ -1.66
CHFRQ96EP1 MIR8069-1-201ENST00000616627 86 ntBASIC4.66□□□□□ -1.66
CHFRQ96EP1 AL603758.1-201ENST00000618654 241 ntBASIC4.66□□□□□ -1.66
CHFRQ96EP1 MIR8069-2-201ENST00000621412 86 ntBASIC4.66□□□□□ -1.66
CHFRQ96EP1 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.66□□□□□ -1.66
CHFRQ96EP1 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.66□□□□□ -1.66
CHFRQ96EP1 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.66□□□□□ -1.66
CHFRQ96EP1 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CHFRQ96EP1 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC4.66□□□□□ -1.66
CHFRQ96EP1 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CHFRQ96EP1 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
CHFRQ96EP1 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.66□□□□□ -1.66
CHFRQ96EP1 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
CHFRQ96EP1 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
CHFRQ96EP1 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CHFRQ96EP1 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.65□□□□□ -1.66
CHFRQ96EP1 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CHFRQ96EP1 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC4.65□□□□□ -1.67
CHFRQ96EP1 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CHFRQ96EP1 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CHFRQ96EP1 RNU6-317P-201ENST00000384031 107 ntBASIC4.65□□□□□ -1.67
CHFRQ96EP1 AP000580.1-201ENST00000404439 358 ntBASIC4.65□□□□□ -1.67
CHFRQ96EP1 Y_RNA.598-201ENST00000410480 95 ntBASIC4.65□□□□□ -1.67
CHFRQ96EP1 RNU2-42P-201ENST00000410697 113 ntBASIC4.65□□□□□ -1.67
CHFRQ96EP1 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.65□□□□□ -1.67
CHFRQ96EP1 AC011933.1-201ENST00000413334 321 ntBASIC4.65□□□□□ -1.67
CHFRQ96EP1 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.65□□□□□ -1.67
CHFRQ96EP1 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.65□□□□□ -1.67
CHFRQ96EP1 FO393419.3-201ENST00000428741 282 ntBASIC4.65□□□□□ -1.67
CHFRQ96EP1 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CHFRQ96EP1 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.65□□□□□ -1.67
CHFRQ96EP1 AC024082.2-201ENST00000434771 238 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 141.4 ms