Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HLA-CQ95604 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
HLA-CQ95604 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HLA-CQ95604 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
HLA-CQ95604 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
HLA-CQ95604 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.25□□□□□ -1.41
HLA-CQ95604 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.25□□□□□ -1.41
HLA-CQ95604 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HLA-CQ95604 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC6.25□□□□□ -1.41
HLA-CQ95604 Y_RNA.84-201ENST00000363011 104 ntBASIC6.25□□□□□ -1.41
HLA-CQ95604 SNORD81.1-201ENST00000363064 77 ntBASIC6.25□□□□□ -1.41
HLA-CQ95604 Y_RNA.200-201ENST00000364018 102 ntBASIC6.25□□□□□ -1.41
HLA-CQ95604 AL591034.2-201ENST00000402839 359 ntBASIC6.25□□□□□ -1.41
HLA-CQ95604 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC6.25□□□□□ -1.41
HLA-CQ95604 AC007098.1-201ENST00000420122 367 ntBASIC6.25□□□□□ -1.41
HLA-CQ95604 RPS15AP6-201ENST00000420703 385 ntBASIC6.25□□□□□ -1.41
HLA-CQ95604 RPS12P17-201ENST00000438591 377 ntBASIC6.25□□□□□ -1.41
HLA-CQ95604 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC6.25□□□□□ -1.41
HLA-CQ95604 RPEP5-201ENST00000441137 268 ntBASIC6.25□□□□□ -1.41
HLA-CQ95604 TMSB4XP3-201ENST00000445144 114 ntBASIC6.25□□□□□ -1.41
HLA-CQ95604 AL136097.1-201ENST00000456945 913 ntBASIC6.25□□□□□ -1.41
HLA-CQ95604 CREM-238ENST00000488741 651 ntTSL 2 BASIC6.25□□□□□ -1.41
HLA-CQ95604 AC072052.1-201ENST00000496556 306 ntBASIC6.25□□□□□ -1.41
HLA-CQ95604 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC6.25□□□□□ -1.41
HLA-CQ95604 Y_RNA.713-201ENST00000517013 96 ntBASIC6.25□□□□□ -1.41
HLA-CQ95604 AC104576.1-201ENST00000524225 88 ntBASIC6.25□□□□□ -1.41
HLA-CQ95604 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC6.25□□□□□ -1.41
HLA-CQ95604 MEG8-215ENST00000555354 469 ntTSL 3 BASIC6.25□□□□□ -1.41
HLA-CQ95604 HNRNPCP4-201ENST00000571636 900 ntBASIC6.25□□□□□ -1.41
HLA-CQ95604 MIR4646-201ENST00000580775 63 ntBASIC6.25□□□□□ -1.41
HLA-CQ95604 MIR3133-201ENST00000583157 78 ntBASIC6.25□□□□□ -1.41
HLA-CQ95604 AC123786.2-201ENST00000603459 275 ntBASIC6.25□□□□□ -1.41
HLA-CQ95604 RNU6-85P-201ENST00000605989 107 ntBASIC6.25□□□□□ -1.41
HLA-CQ95604 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC6.25□□□□□ -1.41
HLA-CQ95604 DLEU1_1.1-201ENST00000618107 190 ntBASIC6.25□□□□□ -1.41
HLA-CQ95604 MSL3P1-202ENST00000440028 1468 ntBASIC6.25□□□□□ -1.41
HLA-CQ95604 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HLA-CQ95604 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
HLA-CQ95604 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.25□□□□□ -1.41
HLA-CQ95604 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HLA-CQ95604 MFSD8-217ENST00000641178 4374 ntBASIC6.25□□□□□ -1.41
HLA-CQ95604 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
HLA-CQ95604 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
HLA-CQ95604 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HLA-CQ95604 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC6.25□□□□□ -1.41
HLA-CQ95604 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC6.25□□□□□ -1.41
HLA-CQ95604 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HLA-CQ95604 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HLA-CQ95604 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
HLA-CQ95604 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC6.24□□□□□ -1.41
HLA-CQ95604 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HLA-CQ95604 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.24□□□□□ -1.41
HLA-CQ95604 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.24□□□□□ -1.41
HLA-CQ95604 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC6.24□□□□□ -1.41
HLA-CQ95604 RNU6-339P-201ENST00000384310 107 ntBASIC6.24□□□□□ -1.41
HLA-CQ95604 MIR765-201ENST00000390226 114 ntBASIC6.24□□□□□ -1.41
HLA-CQ95604 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
HLA-CQ95604 CYB5AP4-201ENST00000396692 399 ntBASIC6.24□□□□□ -1.41
HLA-CQ95604 AL139156.1-201ENST00000412785 841 ntBASIC6.24□□□□□ -1.41
HLA-CQ95604 EIF4EP2-201ENST00000422816 654 ntBASIC6.24□□□□□ -1.41
HLA-CQ95604 AL606753.1-201ENST00000427435 87 ntBASIC6.24□□□□□ -1.41
HLA-CQ95604 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC6.24□□□□□ -1.41
HLA-CQ95604 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC6.24□□□□□ -1.41
HLA-CQ95604 RPL21P41-201ENST00000459863 264 ntBASIC6.24□□□□□ -1.41
HLA-CQ95604 RPS17P15-201ENST00000475609 349 ntBASIC6.24□□□□□ -1.41
HLA-CQ95604 RPS4XP1-201ENST00000482189 787 ntBASIC6.24□□□□□ -1.41
HLA-CQ95604 MTCO3P44-201ENST00000510977 541 ntBASIC6.24□□□□□ -1.41
HLA-CQ95604 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC6.24□□□□□ -1.41
HLA-CQ95604 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.24□□□□□ -1.41
HLA-CQ95604 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC6.24□□□□□ -1.41
HLA-CQ95604 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC6.24□□□□□ -1.41
HLA-CQ95604 AC096996.1-201ENST00000563813 325 ntBASIC6.24□□□□□ -1.41
HLA-CQ95604 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC6.24□□□□□ -1.41
HLA-CQ95604 AC006329.2-201ENST00000611491 394 ntBASIC6.24□□□□□ -1.41
HLA-CQ95604 FP236240.3-201ENST00000623061 327 ntBASIC6.24□□□□□ -1.41
HLA-CQ95604 AL596275.2-208ENST00000641192 594 ntBASIC6.24□□□□□ -1.41
HLA-CQ95604 AC025470.1-201ENST00000510053 2032 ntBASIC6.24□□□□□ -1.41
HLA-CQ95604 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.24□□□□□ -1.41
HLA-CQ95604 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
HLA-CQ95604 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
HLA-CQ95604 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HLA-CQ95604 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HLA-CQ95604 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
HLA-CQ95604 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HLA-CQ95604 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.24□□□□□ -1.41
HLA-CQ95604 ST7-212ENST00000422922 1887 ntTSL 5 BASIC6.24□□□□□ -1.41
HLA-CQ95604 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HLA-CQ95604 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HLA-CQ95604 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HLA-CQ95604 ANKRD36BP1-201ENST00000358576 1779 ntBASIC6.23□□□□□ -1.41
HLA-CQ95604 MAPK10-323ENST00000641493 3207 ntBASIC6.23□□□□□ -1.41
HLA-CQ95604 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.23□□□□□ -1.41
HLA-CQ95604 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HLA-CQ95604 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
HLA-CQ95604 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HLA-CQ95604 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC6.23□□□□□ -1.41
HLA-CQ95604 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
HLA-CQ95604 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC6.23□□□□□ -1.41
HLA-CQ95604 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC6.23□□□□□ -1.41
HLA-CQ95604 AC027228.2-201ENST00000567141 2154 ntBASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms