Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 AC093535.2-201ENST00000624769 2326 ntBASIC4.82□□□□□ -1.64
RAPGEF4Q8WZA2 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
RAPGEF4Q8WZA2 RNU1-108P-201ENST00000362556 161 ntBASIC4.82□□□□□ -1.64
RAPGEF4Q8WZA2 RNU1-33P-201ENST00000364249 162 ntBASIC4.82□□□□□ -1.64
RAPGEF4Q8WZA2 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RAPGEF4Q8WZA2 RNU6-178P-201ENST00000384631 104 ntBASIC4.82□□□□□ -1.64
RAPGEF4Q8WZA2 AC073264.1-201ENST00000411508 416 ntBASIC4.82□□□□□ -1.64
RAPGEF4Q8WZA2 TPMTP3-201ENST00000411928 735 ntBASIC4.82□□□□□ -1.64
RAPGEF4Q8WZA2 RPL7P8-201ENST00000411964 730 ntBASIC4.82□□□□□ -1.64
RAPGEF4Q8WZA2 HSFY4P-201ENST00000415994 1181 ntBASIC4.82□□□□□ -1.64
RAPGEF4Q8WZA2 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC4.82□□□□□ -1.64
RAPGEF4Q8WZA2 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.82□□□□□ -1.64
RAPGEF4Q8WZA2 OFD1P12Y-201ENST00000427963 1207 ntBASIC4.82□□□□□ -1.64
RAPGEF4Q8WZA2 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC4.82□□□□□ -1.64
RAPGEF4Q8WZA2 AL353706.1-201ENST00000436728 494 ntBASIC4.82□□□□□ -1.64
RAPGEF4Q8WZA2 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.82□□□□□ -1.64
RAPGEF4Q8WZA2 CYCSP32-201ENST00000440548 321 ntBASIC4.82□□□□□ -1.64
RAPGEF4Q8WZA2 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RAPGEF4Q8WZA2 RPL30P11-201ENST00000495304 339 ntBASIC4.82□□□□□ -1.64
RAPGEF4Q8WZA2 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.82□□□□□ -1.64
RAPGEF4Q8WZA2 AC113430.1-201ENST00000506872 718 ntBASIC4.82□□□□□ -1.64
RAPGEF4Q8WZA2 MTND4P2-201ENST00000507767 1203 ntBASIC4.82□□□□□ -1.64
RAPGEF4Q8WZA2 DEFB131D-201ENST00000526803 184 ntBASIC4.82□□□□□ -1.64
RAPGEF4Q8WZA2 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
RAPGEF4Q8WZA2 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.82□□□□□ -1.64
RAPGEF4Q8WZA2 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.82□□□□□ -1.64
RAPGEF4Q8WZA2 AC090502.2-201ENST00000549267 280 ntBASIC4.82□□□□□ -1.64
RAPGEF4Q8WZA2 AC018552.3-201ENST00000567416 561 ntBASIC4.82□□□□□ -1.64
RAPGEF4Q8WZA2 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC4.82□□□□□ -1.64
RAPGEF4Q8WZA2 AC008507.1-201ENST00000587506 734 ntBASIC4.82□□□□□ -1.64
RAPGEF4Q8WZA2 MTCYBP22-201ENST00000603788 447 ntBASIC4.82□□□□□ -1.64
RAPGEF4Q8WZA2 AC012603.1-201ENST00000606424 528 ntBASIC4.82□□□□□ -1.64
RAPGEF4Q8WZA2 AC106028.5-201ENST00000610332 395 ntBASIC4.82□□□□□ -1.64
RAPGEF4Q8WZA2 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.82□□□□□ -1.64
RAPGEF4Q8WZA2 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.82□□□□□ -1.64
RAPGEF4Q8WZA2 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RAPGEF4Q8WZA2 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RAPGEF4Q8WZA2 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.82□□□□□ -1.64
RAPGEF4Q8WZA2 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.82□□□□□ -1.64
RAPGEF4Q8WZA2 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RAPGEF4Q8WZA2 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RAPGEF4Q8WZA2 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RAPGEF4Q8WZA2 AL079343.1-201ENST00000572358 1771 ntBASIC4.81□□□□□ -1.64
RAPGEF4Q8WZA2 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
RAPGEF4Q8WZA2 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.81□□□□□ -1.64
RAPGEF4Q8WZA2 RPL21P132-201ENST00000331267 462 ntBASIC4.81□□□□□ -1.64
RAPGEF4Q8WZA2 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RAPGEF4Q8WZA2 RNU6-921P-201ENST00000384361 107 ntBASIC4.81□□□□□ -1.64
RAPGEF4Q8WZA2 Y_RNA.505-201ENST00000384489 102 ntBASIC4.81□□□□□ -1.64
RAPGEF4Q8WZA2 AL953862.1-201ENST00000423016 168 ntBASIC4.81□□□□□ -1.64
RAPGEF4Q8WZA2 AL049610.1-201ENST00000423374 372 ntBASIC4.81□□□□□ -1.64
RAPGEF4Q8WZA2 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC4.81□□□□□ -1.64
RAPGEF4Q8WZA2 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.81□□□□□ -1.64
RAPGEF4Q8WZA2 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.81□□□□□ -1.64
RAPGEF4Q8WZA2 UBE2FP3-201ENST00000436366 524 ntBASIC4.81□□□□□ -1.64
RAPGEF4Q8WZA2 MTND1P30-201ENST00000441241 901 ntBASIC4.81□□□□□ -1.64
RAPGEF4Q8WZA2 MTCO1P48-201ENST00000448024 1096 ntBASIC4.81□□□□□ -1.64
RAPGEF4Q8WZA2 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4.81□□□□□ -1.64
RAPGEF4Q8WZA2 RPL21P10-201ENST00000463521 490 ntBASIC4.81□□□□□ -1.64
RAPGEF4Q8WZA2 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC4.81□□□□□ -1.64
RAPGEF4Q8WZA2 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.81□□□□□ -1.64
RAPGEF4Q8WZA2 AC010424.1-201ENST00000506336 297 ntBASIC4.81□□□□□ -1.64
RAPGEF4Q8WZA2 SNORA70.18-201ENST00000516696 98 ntBASIC4.81□□□□□ -1.64
RAPGEF4Q8WZA2 Y_RNA.695-201ENST00000516715 107 ntBASIC4.81□□□□□ -1.64
RAPGEF4Q8WZA2 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RAPGEF4Q8WZA2 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC4.81□□□□□ -1.64
RAPGEF4Q8WZA2 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC4.81□□□□□ -1.64
RAPGEF4Q8WZA2 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.81□□□□□ -1.64
RAPGEF4Q8WZA2 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.81□□□□□ -1.64
RAPGEF4Q8WZA2 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.81□□□□□ -1.64
RAPGEF4Q8WZA2 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.81□□□□□ -1.64
RAPGEF4Q8WZA2 NF1P5-201ENST00000588287 448 ntBASIC4.81□□□□□ -1.64
RAPGEF4Q8WZA2 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.81□□□□□ -1.64
RAPGEF4Q8WZA2 AC073544.2-201ENST00000601155 540 ntBASIC4.81□□□□□ -1.64
RAPGEF4Q8WZA2 AC083899.3-201ENST00000603413 594 ntBASIC4.81□□□□□ -1.64
RAPGEF4Q8WZA2 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.81□□□□□ -1.64
RAPGEF4Q8WZA2 MIR8058-201ENST00000615737 89 ntBASIC4.81□□□□□ -1.64
RAPGEF4Q8WZA2 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RAPGEF4Q8WZA2 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.81□□□□□ -1.64
RAPGEF4Q8WZA2 AC006927.3-201ENST00000638789 384 ntBASIC4.81□□□□□ -1.64
RAPGEF4Q8WZA2 LINC01109-201ENST00000603837 3081 ntBASIC4.81□□□□□ -1.64
RAPGEF4Q8WZA2 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
RAPGEF4Q8WZA2 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC4.81□□□□□ -1.64
RAPGEF4Q8WZA2 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.81□□□□□ -1.64
RAPGEF4Q8WZA2 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RAPGEF4Q8WZA2 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.8□□□□□ -1.64
RAPGEF4Q8WZA2 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
RAPGEF4Q8WZA2 DDX43P2-201ENST00000604753 1354 ntBASIC4.8□□□□□ -1.64
RAPGEF4Q8WZA2 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
RAPGEF4Q8WZA2 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RAPGEF4Q8WZA2 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
RAPGEF4Q8WZA2 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RAPGEF4Q8WZA2 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RAPGEF4Q8WZA2 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.8□□□□□ -1.64
RAPGEF4Q8WZA2 DSTNP4-201ENST00000399472 474 ntBASIC4.8□□□□□ -1.64
RAPGEF4Q8WZA2 RPS24P12-201ENST00000402084 394 ntBASIC4.8□□□□□ -1.64
RAPGEF4Q8WZA2 RNU2-28P-201ENST00000410457 189 ntBASIC4.8□□□□□ -1.64
RAPGEF4Q8WZA2 RPS26P47-201ENST00000427219 348 ntBASIC4.8□□□□□ -1.64
RAPGEF4Q8WZA2 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RAPGEF4Q8WZA2 ATP5JP1-201ENST00000431631 322 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms